Expression, Characterisation and Structural Homology Modelling of Recombinant Mercuric Reductase of Streptomyces sp. AS2

Mercury pollution poses a significant environmental challenge worldwide, prompting extensive efforts over the past two decades to combat its detrimental effects. Cloning merA from Streptomyces sp. AS2 (Accession numbers LC026157) into the expression vector pET-28c (+) marks a critical advancement in...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of tropical biodiversity and biotechnology 2024-10, Vol.9 (4), p.88773
Hauptverfasser: Khasanah, Anis Uswatun, Putri, Wahyu Aristyaning, Rahayu, Hanum Mukti, Sembiring, Langkah, Purwestri, Yekti Asih
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue 4
container_start_page 88773
container_title Journal of tropical biodiversity and biotechnology
container_volume 9
creator Khasanah, Anis Uswatun
Putri, Wahyu Aristyaning
Rahayu, Hanum Mukti
Sembiring, Langkah
Purwestri, Yekti Asih
description Mercury pollution poses a significant environmental challenge worldwide, prompting extensive efforts over the past two decades to combat its detrimental effects. Cloning merA from Streptomyces sp. AS2 (Accession numbers LC026157) into the expression vector pET-28c (+) marks a critical advancement in this field, necessitating further investigation into the expression and structural analysis of the resulting recombinant mercuric reductase protein. This study aimed to optimise the expression and characterise the structural MerA protein. The study involved the expression of merA from AS2 isolate in the host Escherichia coli BL21 and the measurement of mercuric reductase using SDS-PAGE. Induction of E. coli BL21 was optimized by adding IPTG concentration and incubation time. Purification of mercuric reductase was attempted using ammonium sulphate precipitation, dialysis, and column chromatography. Protein structural characterisation was conducted using computational modelling tools Swiss-Model and Phyre2. Expression of merA from AS2 isolate was successfully performed in E. coli BL21, with SDS-PAGE showing a dominant band in the 55-70 kDa range using IPTG concentration 1 and 1,2 mM and 18-hour incubation time. The specific activity of mercuric reductase was obtained at an enzyme concentration of 294.07 Unit/mg. Protein structural characterisation revealed homology with Lysinibacillus sphaericus (Swiss-Model) and similar folding to c5c1Yc, a known mercuric reductase from the same species using Phyre2. The successful expression of recombinant pET-28c (+)-MerA in E. coli BL21 offers new opportunities for bioremediation efforts targeting mercury contamination. 
doi_str_mv 10.22146/jtbb.88773
format Article
fullrecord <record><control><sourceid>crossref</sourceid><recordid>TN_cdi_crossref_primary_10_22146_jtbb_88773</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>10_22146_jtbb_88773</sourcerecordid><originalsourceid>FETCH-LOGICAL-c733-fc29c8493ba4cf86c0d11ebe4314dc2988d1fda07aff221d6006e4a53ee61e743</originalsourceid><addsrcrecordid>eNo9kNFKwzAUhoMoOOaufIHca2fSpE16OcZ0wobgdl_S5GRW2qYkGWxvbzbFq3P4_nP-iw-hR0rmeU55-fIdm2YupRDsBk3ygpOsKiS9_d8Fu0ezENqGFKSouODlBJ1Wp9FDgm54xssv5ZWO4NugYiJYDQbvoj_qePSqw2vXu84dznjrDHRdOxyws_gTtOubdlBDxFvw-uhbnaBJXyrA5SJVwBhdf9YQcBjneLHLH9CdVV2A2d-cov3rar9cZ5uPt_flYpNpwVhmdV5pySvWKK6tLDUxlEIDnFFuUialodYoIpS1SYIpCSmBq4IBlBQEZ1P09FurvQvBg61H3_bKn2tK6qu2-qKtvmpjP1xDY1g</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Expression, Characterisation and Structural Homology Modelling of Recombinant Mercuric Reductase of Streptomyces sp. AS2</title><source>DOAJ Directory of Open Access Journals</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Khasanah, Anis Uswatun ; Putri, Wahyu Aristyaning ; Rahayu, Hanum Mukti ; Sembiring, Langkah ; Purwestri, Yekti Asih</creator><creatorcontrib>Khasanah, Anis Uswatun ; Putri, Wahyu Aristyaning ; Rahayu, Hanum Mukti ; Sembiring, Langkah ; Purwestri, Yekti Asih</creatorcontrib><description>Mercury pollution poses a significant environmental challenge worldwide, prompting extensive efforts over the past two decades to combat its detrimental effects. Cloning merA from Streptomyces sp. AS2 (Accession numbers LC026157) into the expression vector pET-28c (+) marks a critical advancement in this field, necessitating further investigation into the expression and structural analysis of the resulting recombinant mercuric reductase protein. This study aimed to optimise the expression and characterise the structural MerA protein. The study involved the expression of merA from AS2 isolate in the host Escherichia coli BL21 and the measurement of mercuric reductase using SDS-PAGE. Induction of E. coli BL21 was optimized by adding IPTG concentration and incubation time. Purification of mercuric reductase was attempted using ammonium sulphate precipitation, dialysis, and column chromatography. Protein structural characterisation was conducted using computational modelling tools Swiss-Model and Phyre2. Expression of merA from AS2 isolate was successfully performed in E. coli BL21, with SDS-PAGE showing a dominant band in the 55-70 kDa range using IPTG concentration 1 and 1,2 mM and 18-hour incubation time. The specific activity of mercuric reductase was obtained at an enzyme concentration of 294.07 Unit/mg. Protein structural characterisation revealed homology with Lysinibacillus sphaericus (Swiss-Model) and similar folding to c5c1Yc, a known mercuric reductase from the same species using Phyre2. The successful expression of recombinant pET-28c (+)-MerA in E. coli BL21 offers new opportunities for bioremediation efforts targeting mercury contamination. </description><identifier>ISSN: 2540-9573</identifier><identifier>EISSN: 2540-9581</identifier><identifier>DOI: 10.22146/jtbb.88773</identifier><language>eng</language><ispartof>Journal of tropical biodiversity and biotechnology, 2024-10, Vol.9 (4), p.88773</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><orcidid>0000-0002-7032-9253 ; 0000-0002-0007-3301 ; 0000-0001-7131-9850</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,860,27901,27902</link.rule.ids></links><search><creatorcontrib>Khasanah, Anis Uswatun</creatorcontrib><creatorcontrib>Putri, Wahyu Aristyaning</creatorcontrib><creatorcontrib>Rahayu, Hanum Mukti</creatorcontrib><creatorcontrib>Sembiring, Langkah</creatorcontrib><creatorcontrib>Purwestri, Yekti Asih</creatorcontrib><title>Expression, Characterisation and Structural Homology Modelling of Recombinant Mercuric Reductase of Streptomyces sp. AS2</title><title>Journal of tropical biodiversity and biotechnology</title><description>Mercury pollution poses a significant environmental challenge worldwide, prompting extensive efforts over the past two decades to combat its detrimental effects. Cloning merA from Streptomyces sp. AS2 (Accession numbers LC026157) into the expression vector pET-28c (+) marks a critical advancement in this field, necessitating further investigation into the expression and structural analysis of the resulting recombinant mercuric reductase protein. This study aimed to optimise the expression and characterise the structural MerA protein. The study involved the expression of merA from AS2 isolate in the host Escherichia coli BL21 and the measurement of mercuric reductase using SDS-PAGE. Induction of E. coli BL21 was optimized by adding IPTG concentration and incubation time. Purification of mercuric reductase was attempted using ammonium sulphate precipitation, dialysis, and column chromatography. Protein structural characterisation was conducted using computational modelling tools Swiss-Model and Phyre2. Expression of merA from AS2 isolate was successfully performed in E. coli BL21, with SDS-PAGE showing a dominant band in the 55-70 kDa range using IPTG concentration 1 and 1,2 mM and 18-hour incubation time. The specific activity of mercuric reductase was obtained at an enzyme concentration of 294.07 Unit/mg. Protein structural characterisation revealed homology with Lysinibacillus sphaericus (Swiss-Model) and similar folding to c5c1Yc, a known mercuric reductase from the same species using Phyre2. The successful expression of recombinant pET-28c (+)-MerA in E. coli BL21 offers new opportunities for bioremediation efforts targeting mercury contamination. </description><issn>2540-9573</issn><issn>2540-9581</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNo9kNFKwzAUhoMoOOaufIHca2fSpE16OcZ0wobgdl_S5GRW2qYkGWxvbzbFq3P4_nP-iw-hR0rmeU55-fIdm2YupRDsBk3ygpOsKiS9_d8Fu0ezENqGFKSouODlBJ1Wp9FDgm54xssv5ZWO4NugYiJYDQbvoj_qePSqw2vXu84dznjrDHRdOxyws_gTtOubdlBDxFvw-uhbnaBJXyrA5SJVwBhdf9YQcBjneLHLH9CdVV2A2d-cov3rar9cZ5uPt_flYpNpwVhmdV5pySvWKK6tLDUxlEIDnFFuUialodYoIpS1SYIpCSmBq4IBlBQEZ1P09FurvQvBg61H3_bKn2tK6qu2-qKtvmpjP1xDY1g</recordid><startdate>20241021</startdate><enddate>20241021</enddate><creator>Khasanah, Anis Uswatun</creator><creator>Putri, Wahyu Aristyaning</creator><creator>Rahayu, Hanum Mukti</creator><creator>Sembiring, Langkah</creator><creator>Purwestri, Yekti Asih</creator><scope>AAYXX</scope><scope>CITATION</scope><orcidid>https://orcid.org/0000-0002-7032-9253</orcidid><orcidid>https://orcid.org/0000-0002-0007-3301</orcidid><orcidid>https://orcid.org/0000-0001-7131-9850</orcidid></search><sort><creationdate>20241021</creationdate><title>Expression, Characterisation and Structural Homology Modelling of Recombinant Mercuric Reductase of Streptomyces sp. AS2</title><author>Khasanah, Anis Uswatun ; Putri, Wahyu Aristyaning ; Rahayu, Hanum Mukti ; Sembiring, Langkah ; Purwestri, Yekti Asih</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c733-fc29c8493ba4cf86c0d11ebe4314dc2988d1fda07aff221d6006e4a53ee61e743</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Khasanah, Anis Uswatun</creatorcontrib><creatorcontrib>Putri, Wahyu Aristyaning</creatorcontrib><creatorcontrib>Rahayu, Hanum Mukti</creatorcontrib><creatorcontrib>Sembiring, Langkah</creatorcontrib><creatorcontrib>Purwestri, Yekti Asih</creatorcontrib><collection>CrossRef</collection><jtitle>Journal of tropical biodiversity and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Khasanah, Anis Uswatun</au><au>Putri, Wahyu Aristyaning</au><au>Rahayu, Hanum Mukti</au><au>Sembiring, Langkah</au><au>Purwestri, Yekti Asih</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expression, Characterisation and Structural Homology Modelling of Recombinant Mercuric Reductase of Streptomyces sp. AS2</atitle><jtitle>Journal of tropical biodiversity and biotechnology</jtitle><date>2024-10-21</date><risdate>2024</risdate><volume>9</volume><issue>4</issue><spage>88773</spage><pages>88773-</pages><issn>2540-9573</issn><eissn>2540-9581</eissn><abstract>Mercury pollution poses a significant environmental challenge worldwide, prompting extensive efforts over the past two decades to combat its detrimental effects. Cloning merA from Streptomyces sp. AS2 (Accession numbers LC026157) into the expression vector pET-28c (+) marks a critical advancement in this field, necessitating further investigation into the expression and structural analysis of the resulting recombinant mercuric reductase protein. This study aimed to optimise the expression and characterise the structural MerA protein. The study involved the expression of merA from AS2 isolate in the host Escherichia coli BL21 and the measurement of mercuric reductase using SDS-PAGE. Induction of E. coli BL21 was optimized by adding IPTG concentration and incubation time. Purification of mercuric reductase was attempted using ammonium sulphate precipitation, dialysis, and column chromatography. Protein structural characterisation was conducted using computational modelling tools Swiss-Model and Phyre2. Expression of merA from AS2 isolate was successfully performed in E. coli BL21, with SDS-PAGE showing a dominant band in the 55-70 kDa range using IPTG concentration 1 and 1,2 mM and 18-hour incubation time. The specific activity of mercuric reductase was obtained at an enzyme concentration of 294.07 Unit/mg. Protein structural characterisation revealed homology with Lysinibacillus sphaericus (Swiss-Model) and similar folding to c5c1Yc, a known mercuric reductase from the same species using Phyre2. The successful expression of recombinant pET-28c (+)-MerA in E. coli BL21 offers new opportunities for bioremediation efforts targeting mercury contamination. </abstract><doi>10.22146/jtbb.88773</doi><orcidid>https://orcid.org/0000-0002-7032-9253</orcidid><orcidid>https://orcid.org/0000-0002-0007-3301</orcidid><orcidid>https://orcid.org/0000-0001-7131-9850</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2540-9573
ispartof Journal of tropical biodiversity and biotechnology, 2024-10, Vol.9 (4), p.88773
issn 2540-9573
2540-9581
language eng
recordid cdi_crossref_primary_10_22146_jtbb_88773
source DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals
title Expression, Characterisation and Structural Homology Modelling of Recombinant Mercuric Reductase of Streptomyces sp. AS2
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-08T17%3A52%3A42IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-crossref&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Expression,%20Characterisation%20and%20Structural%20Homology%20Modelling%20of%20Recombinant%20Mercuric%20Reductase%20of%20Streptomyces%20sp.%20AS2&rft.jtitle=Journal%20of%20tropical%20biodiversity%20and%20biotechnology&rft.au=Khasanah,%20Anis%20Uswatun&rft.date=2024-10-21&rft.volume=9&rft.issue=4&rft.spage=88773&rft.pages=88773-&rft.issn=2540-9573&rft.eissn=2540-9581&rft_id=info:doi/10.22146/jtbb.88773&rft_dat=%3Ccrossref%3E10_22146_jtbb_88773%3C/crossref%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true