Simultaneous Genotyping of Human Platelet Antigens by Hot Start Sequence- Specific Polymerase Chain Reaction with DNA Polymerase AmpliTaq Gold
Objectives: Human platelet alloantigen (HPA) typing has potential clinical relevance in a variety of contexts. We can improve methods for HPA genotyping by complementing our knowledge of the DNA sequence polymorphisms of HPA genes and experience with various DNA-based HPA typing techniques. Methods:...
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Veröffentlicht in: | Vox sanguinis 1997-03, Vol.72 (3), p.192-196 |
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creator | Chen, Dong-Feng Pastucha, Ladislav T. Chen, Hai-Yen Kadar, Janos G. Stangel, Walter |
description | Objectives: Human platelet alloantigen (HPA) typing has potential clinical relevance
in a variety of contexts. We can improve methods for HPA genotyping by
complementing our knowledge of the DNA sequence polymorphisms of HPA
genes and experience with various DNA-based HPA typing techniques. Methods:
A newly available DNA polymerase, AmpliTaq Gold (Perkin Elmer), provided
in an inactive state and activated by heat, makes it possible to perform a hot
start polymerase chain reaction (PCR) in order to prevent nonspecific amplification
during the setup of PCR. To establish a practical procedure for HPA-1, 2, 3
and 5 genotyping, we applied the AmpliTaq Gold for a hot start PCR and employed
8 pairs of published sequence-specific primers (SSP). A simple simultaneous
genotyping of these 4 HPA systems could be rapidly achieved with high specificity.
Results: The HPA gene frequencies observed in 126 randomly selected German
blood donors were 0.82 and 0.18 for HPA-la and lb, 0.92 and 0.08 for
HPA-2a and 2b, 0.63 and 0.37 for HPA-3a and 3b and 0.90 and 0.10 for HPA-5a
and Sb, respectively. Conclusion: Using our hot start PCR-SSP procedure with
AmpliTaq Gold a simple, rapid and reproducible genotyping for HPA-1, 2, 3 and
S systems could be achieved. |
doi_str_mv | 10.1159/000461990 |
format | Article |
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in a variety of contexts. We can improve methods for HPA genotyping by
complementing our knowledge of the DNA sequence polymorphisms of HPA
genes and experience with various DNA-based HPA typing techniques. Methods:
A newly available DNA polymerase, AmpliTaq Gold (Perkin Elmer), provided
in an inactive state and activated by heat, makes it possible to perform a hot
start polymerase chain reaction (PCR) in order to prevent nonspecific amplification
during the setup of PCR. To establish a practical procedure for HPA-1, 2, 3
and 5 genotyping, we applied the AmpliTaq Gold for a hot start PCR and employed
8 pairs of published sequence-specific primers (SSP). A simple simultaneous
genotyping of these 4 HPA systems could be rapidly achieved with high specificity.
Results: The HPA gene frequencies observed in 126 randomly selected German
blood donors were 0.82 and 0.18 for HPA-la and lb, 0.92 and 0.08 for
HPA-2a and 2b, 0.63 and 0.37 for HPA-3a and 3b and 0.90 and 0.10 for HPA-5a
and Sb, respectively. Conclusion: Using our hot start PCR-SSP procedure with
AmpliTaq Gold a simple, rapid and reproducible genotyping for HPA-1, 2, 3 and
S systems could be achieved.</description><identifier>ISSN: 0042-9007</identifier><identifier>EISSN: 1423-0410</identifier><identifier>DOI: 10.1159/000461990</identifier><language>eng</language><publisher>Basel, Switzerland</publisher><subject>Original Paper</subject><ispartof>Vox sanguinis, 1997-03, Vol.72 (3), p.192-196</ispartof><rights>1997 S. Karger AG, Basel</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c123f-5a44e95fb4e4ba796229c291c4c38245e102dffcf55eaa1f2f650e86e11faf343</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids></links><search><creatorcontrib>Chen, Dong-Feng</creatorcontrib><creatorcontrib>Pastucha, Ladislav T.</creatorcontrib><creatorcontrib>Chen, Hai-Yen</creatorcontrib><creatorcontrib>Kadar, Janos G.</creatorcontrib><creatorcontrib>Stangel, Walter</creatorcontrib><title>Simultaneous Genotyping of Human Platelet Antigens by Hot Start Sequence- Specific Polymerase Chain Reaction with DNA Polymerase AmpliTaq Gold</title><title>Vox sanguinis</title><addtitle>Vox Sanguinis</addtitle><description>Objectives: Human platelet alloantigen (HPA) typing has potential clinical relevance
in a variety of contexts. We can improve methods for HPA genotyping by
complementing our knowledge of the DNA sequence polymorphisms of HPA
genes and experience with various DNA-based HPA typing techniques. Methods:
A newly available DNA polymerase, AmpliTaq Gold (Perkin Elmer), provided
in an inactive state and activated by heat, makes it possible to perform a hot
start polymerase chain reaction (PCR) in order to prevent nonspecific amplification
during the setup of PCR. To establish a practical procedure for HPA-1, 2, 3
and 5 genotyping, we applied the AmpliTaq Gold for a hot start PCR and employed
8 pairs of published sequence-specific primers (SSP). A simple simultaneous
genotyping of these 4 HPA systems could be rapidly achieved with high specificity.
Results: The HPA gene frequencies observed in 126 randomly selected German
blood donors were 0.82 and 0.18 for HPA-la and lb, 0.92 and 0.08 for
HPA-2a and 2b, 0.63 and 0.37 for HPA-3a and 3b and 0.90 and 0.10 for HPA-5a
and Sb, respectively. Conclusion: Using our hot start PCR-SSP procedure with
AmpliTaq Gold a simple, rapid and reproducible genotyping for HPA-1, 2, 3 and
S systems could be achieved.</description><subject>Original Paper</subject><issn>0042-9007</issn><issn>1423-0410</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><recordid>eNpt0EFLwzAUB_AgCs7pwbuHgCcP1SRNu-Y4pm7C0OGmeCtZ9rJF27RLUqRfws9sZTI8eHkP3v_HO_wROqfkmtJE3BBCeEqFIAeoRzmLI8IpOUS97swiQcjgGJ14_96xjGVJD33NTdkUQVqoGo_HYKvQ1saucaXxpCmlxbNCBigg4KENZg3W42WLJ1XA8yBdN2HbgFUQ4XkNymij8Kwq2hKc9IBHG2ksfgapgqks_jRhg28fh3_JsKwLs5BbPK6K1Sk60rLwcPa7--jl_m4xmkTTp_HDaDiNFGWxjhLJOYhELznwpRyIlDGhmKCKqzhjPAFK2EprpZMEpKSa6TQhkKVAqZY65nEfXe3-Kld570DntTOldG1OSf5TZL4vsrMXO_sh3RrcXu7jy3_j16e3ncjrlY6_AcRxfI8</recordid><startdate>199703</startdate><enddate>199703</enddate><creator>Chen, Dong-Feng</creator><creator>Pastucha, Ladislav T.</creator><creator>Chen, Hai-Yen</creator><creator>Kadar, Janos G.</creator><creator>Stangel, Walter</creator><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>199703</creationdate><title>Simultaneous Genotyping of Human Platelet Antigens by Hot Start Sequence- Specific Polymerase Chain Reaction with DNA Polymerase AmpliTaq Gold</title><author>Chen, Dong-Feng ; Pastucha, Ladislav T. ; Chen, Hai-Yen ; Kadar, Janos G. ; Stangel, Walter</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c123f-5a44e95fb4e4ba796229c291c4c38245e102dffcf55eaa1f2f650e86e11faf343</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>Original Paper</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, Dong-Feng</creatorcontrib><creatorcontrib>Pastucha, Ladislav T.</creatorcontrib><creatorcontrib>Chen, Hai-Yen</creatorcontrib><creatorcontrib>Kadar, Janos G.</creatorcontrib><creatorcontrib>Stangel, Walter</creatorcontrib><collection>CrossRef</collection><jtitle>Vox sanguinis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, Dong-Feng</au><au>Pastucha, Ladislav T.</au><au>Chen, Hai-Yen</au><au>Kadar, Janos G.</au><au>Stangel, Walter</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Simultaneous Genotyping of Human Platelet Antigens by Hot Start Sequence- Specific Polymerase Chain Reaction with DNA Polymerase AmpliTaq Gold</atitle><jtitle>Vox sanguinis</jtitle><addtitle>Vox Sanguinis</addtitle><date>1997-03</date><risdate>1997</risdate><volume>72</volume><issue>3</issue><spage>192</spage><epage>196</epage><pages>192-196</pages><issn>0042-9007</issn><eissn>1423-0410</eissn><abstract>Objectives: Human platelet alloantigen (HPA) typing has potential clinical relevance
in a variety of contexts. We can improve methods for HPA genotyping by
complementing our knowledge of the DNA sequence polymorphisms of HPA
genes and experience with various DNA-based HPA typing techniques. Methods:
A newly available DNA polymerase, AmpliTaq Gold (Perkin Elmer), provided
in an inactive state and activated by heat, makes it possible to perform a hot
start polymerase chain reaction (PCR) in order to prevent nonspecific amplification
during the setup of PCR. To establish a practical procedure for HPA-1, 2, 3
and 5 genotyping, we applied the AmpliTaq Gold for a hot start PCR and employed
8 pairs of published sequence-specific primers (SSP). A simple simultaneous
genotyping of these 4 HPA systems could be rapidly achieved with high specificity.
Results: The HPA gene frequencies observed in 126 randomly selected German
blood donors were 0.82 and 0.18 for HPA-la and lb, 0.92 and 0.08 for
HPA-2a and 2b, 0.63 and 0.37 for HPA-3a and 3b and 0.90 and 0.10 for HPA-5a
and Sb, respectively. Conclusion: Using our hot start PCR-SSP procedure with
AmpliTaq Gold a simple, rapid and reproducible genotyping for HPA-1, 2, 3 and
S systems could be achieved.</abstract><cop>Basel, Switzerland</cop><doi>10.1159/000461990</doi><tpages>5</tpages></addata></record> |
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language | eng |
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source | Wiley Online Library Journals Frontfile Complete |
subjects | Original Paper |
title | Simultaneous Genotyping of Human Platelet Antigens by Hot Start Sequence- Specific Polymerase Chain Reaction with DNA Polymerase AmpliTaq Gold |
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