Spectroscopic properties and the nature of reduction products of bacteriochlorophyll in solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides

Using methods of density functional theory, we calculate the structure and simulate the electronic absorption spectra of the anion-radical of bacteriochlorophyll and its form protonated at the keto carbonyl group in a solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides . We...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Optics and spectroscopy 2012-02, Vol.112 (2), p.212-222
Hauptverfasser: Ivashin, N. V., Shchupak, E. E.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 222
container_issue 2
container_start_page 212
container_title Optics and spectroscopy
container_volume 112
creator Ivashin, N. V.
Shchupak, E. E.
description Using methods of density functional theory, we calculate the structure and simulate the electronic absorption spectra of the anion-radical of bacteriochlorophyll and its form protonated at the keto carbonyl group in a solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides . We show that, in both cases, the best agreement between the calculated and experimental data is achieved under the assumption that the anion-radical form of bacteriochlorophyll is formed. An experimentally observed large difference between the spectral properties of the reduced form of bacteriochlorophyll in vitro and in vivo is related to peculiarities of the environment of bacteriochlorophyll in the native system and with the fact that, in this case, the initial nuclear configuration of B A has no time to completely relax in accordance with a new electronic configuration during the lifetime of the state P + B B − . Taking into account the data obtained in this work, we believe that the recently proposed model of coupling of the primary charge separation in the photosynthetic reaction center of Rhodobacter Sphaeroides with the double proton transfer seems to be unlikely.
doi_str_mv 10.1134/S0030400X12020130
format Article
fullrecord <record><control><sourceid>crossref_sprin</sourceid><recordid>TN_cdi_crossref_primary_10_1134_S0030400X12020130</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>10_1134_S0030400X12020130</sourcerecordid><originalsourceid>FETCH-LOGICAL-c288t-230d968f8c333f4a82c1ad9d598b750b0d72af55ba5e16d4bfd6e8a4825420df3</originalsourceid><addsrcrecordid>eNp9kNtKxDAQhoMouB4ewLu8QDWHtpteyuIJFgRXwbuSJhPbpSYlSS_2gXxPE-ud4NXMZP7_m_AjdEXJNaW8vNkRwklJyDtlhBHKyRFa0apmRd1QeoxWeV3k_Sk6C2FPCKWibFboazeBit4F5aZB4cm7CXwcIGBpNY49YCvj7AE7gz3oWcXB2SzLbcivnVQR_OBUP7rk7g_jiAeLgxvnH23mpDmjpt5FFw429TEd8yAXnAKbEBn20jvtFiLeTb0E7wYN4QKdGDkGuPyt5-jt_u5181hsnx-eNrfbQjEhYsE40U0tjFCcc1NKwRSVutFVI7p1RTqi10yaqupkBbTWZWd0DUKWglUlI9rwc0QXrkqJBA-mnfzwKf2hpaTNObd_ck4etnhC0toP8O3ezd6mb_5j-gZQNYVG</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Spectroscopic properties and the nature of reduction products of bacteriochlorophyll in solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides</title><source>SpringerLink Journals</source><creator>Ivashin, N. V. ; Shchupak, E. E.</creator><creatorcontrib>Ivashin, N. V. ; Shchupak, E. E.</creatorcontrib><description>Using methods of density functional theory, we calculate the structure and simulate the electronic absorption spectra of the anion-radical of bacteriochlorophyll and its form protonated at the keto carbonyl group in a solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides . We show that, in both cases, the best agreement between the calculated and experimental data is achieved under the assumption that the anion-radical form of bacteriochlorophyll is formed. An experimentally observed large difference between the spectral properties of the reduced form of bacteriochlorophyll in vitro and in vivo is related to peculiarities of the environment of bacteriochlorophyll in the native system and with the fact that, in this case, the initial nuclear configuration of B A has no time to completely relax in accordance with a new electronic configuration during the lifetime of the state P + B B − . Taking into account the data obtained in this work, we believe that the recently proposed model of coupling of the primary charge separation in the photosynthetic reaction center of Rhodobacter Sphaeroides with the double proton transfer seems to be unlikely.</description><identifier>ISSN: 0030-400X</identifier><identifier>EISSN: 1562-6911</identifier><identifier>DOI: 10.1134/S0030400X12020130</identifier><language>eng</language><publisher>Dordrecht: SP MAIK Nauka/Interperiodica</publisher><subject>Condensed-Matter Spectroscopy ; Lasers ; Optical Devices ; Optics ; Photonics ; Physics ; Physics and Astronomy</subject><ispartof>Optics and spectroscopy, 2012-02, Vol.112 (2), p.212-222</ispartof><rights>Pleiades Publishing, Ltd. 2012</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c288t-230d968f8c333f4a82c1ad9d598b750b0d72af55ba5e16d4bfd6e8a4825420df3</citedby><cites>FETCH-LOGICAL-c288t-230d968f8c333f4a82c1ad9d598b750b0d72af55ba5e16d4bfd6e8a4825420df3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1134/S0030400X12020130$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1134/S0030400X12020130$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51298</link.rule.ids></links><search><creatorcontrib>Ivashin, N. V.</creatorcontrib><creatorcontrib>Shchupak, E. E.</creatorcontrib><title>Spectroscopic properties and the nature of reduction products of bacteriochlorophyll in solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides</title><title>Optics and spectroscopy</title><addtitle>Opt. Spectrosc</addtitle><description>Using methods of density functional theory, we calculate the structure and simulate the electronic absorption spectra of the anion-radical of bacteriochlorophyll and its form protonated at the keto carbonyl group in a solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides . We show that, in both cases, the best agreement between the calculated and experimental data is achieved under the assumption that the anion-radical form of bacteriochlorophyll is formed. An experimentally observed large difference between the spectral properties of the reduced form of bacteriochlorophyll in vitro and in vivo is related to peculiarities of the environment of bacteriochlorophyll in the native system and with the fact that, in this case, the initial nuclear configuration of B A has no time to completely relax in accordance with a new electronic configuration during the lifetime of the state P + B B − . Taking into account the data obtained in this work, we believe that the recently proposed model of coupling of the primary charge separation in the photosynthetic reaction center of Rhodobacter Sphaeroides with the double proton transfer seems to be unlikely.</description><subject>Condensed-Matter Spectroscopy</subject><subject>Lasers</subject><subject>Optical Devices</subject><subject>Optics</subject><subject>Photonics</subject><subject>Physics</subject><subject>Physics and Astronomy</subject><issn>0030-400X</issn><issn>1562-6911</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNp9kNtKxDAQhoMouB4ewLu8QDWHtpteyuIJFgRXwbuSJhPbpSYlSS_2gXxPE-ud4NXMZP7_m_AjdEXJNaW8vNkRwklJyDtlhBHKyRFa0apmRd1QeoxWeV3k_Sk6C2FPCKWibFboazeBit4F5aZB4cm7CXwcIGBpNY49YCvj7AE7gz3oWcXB2SzLbcivnVQR_OBUP7rk7g_jiAeLgxvnH23mpDmjpt5FFw429TEd8yAXnAKbEBn20jvtFiLeTb0E7wYN4QKdGDkGuPyt5-jt_u5181hsnx-eNrfbQjEhYsE40U0tjFCcc1NKwRSVutFVI7p1RTqi10yaqupkBbTWZWd0DUKWglUlI9rwc0QXrkqJBA-mnfzwKf2hpaTNObd_ck4etnhC0toP8O3ezd6mb_5j-gZQNYVG</recordid><startdate>20120201</startdate><enddate>20120201</enddate><creator>Ivashin, N. V.</creator><creator>Shchupak, E. E.</creator><general>SP MAIK Nauka/Interperiodica</general><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20120201</creationdate><title>Spectroscopic properties and the nature of reduction products of bacteriochlorophyll in solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides</title><author>Ivashin, N. V. ; Shchupak, E. E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c288t-230d968f8c333f4a82c1ad9d598b750b0d72af55ba5e16d4bfd6e8a4825420df3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Condensed-Matter Spectroscopy</topic><topic>Lasers</topic><topic>Optical Devices</topic><topic>Optics</topic><topic>Photonics</topic><topic>Physics</topic><topic>Physics and Astronomy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ivashin, N. V.</creatorcontrib><creatorcontrib>Shchupak, E. E.</creatorcontrib><collection>CrossRef</collection><jtitle>Optics and spectroscopy</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ivashin, N. V.</au><au>Shchupak, E. E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spectroscopic properties and the nature of reduction products of bacteriochlorophyll in solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides</atitle><jtitle>Optics and spectroscopy</jtitle><stitle>Opt. Spectrosc</stitle><date>2012-02-01</date><risdate>2012</risdate><volume>112</volume><issue>2</issue><spage>212</spage><epage>222</epage><pages>212-222</pages><issn>0030-400X</issn><eissn>1562-6911</eissn><abstract>Using methods of density functional theory, we calculate the structure and simulate the electronic absorption spectra of the anion-radical of bacteriochlorophyll and its form protonated at the keto carbonyl group in a solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides . We show that, in both cases, the best agreement between the calculated and experimental data is achieved under the assumption that the anion-radical form of bacteriochlorophyll is formed. An experimentally observed large difference between the spectral properties of the reduced form of bacteriochlorophyll in vitro and in vivo is related to peculiarities of the environment of bacteriochlorophyll in the native system and with the fact that, in this case, the initial nuclear configuration of B A has no time to completely relax in accordance with a new electronic configuration during the lifetime of the state P + B B − . Taking into account the data obtained in this work, we believe that the recently proposed model of coupling of the primary charge separation in the photosynthetic reaction center of Rhodobacter Sphaeroides with the double proton transfer seems to be unlikely.</abstract><cop>Dordrecht</cop><pub>SP MAIK Nauka/Interperiodica</pub><doi>10.1134/S0030400X12020130</doi><tpages>11</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0030-400X
ispartof Optics and spectroscopy, 2012-02, Vol.112 (2), p.212-222
issn 0030-400X
1562-6911
language eng
recordid cdi_crossref_primary_10_1134_S0030400X12020130
source SpringerLink Journals
subjects Condensed-Matter Spectroscopy
Lasers
Optical Devices
Optics
Photonics
Physics
Physics and Astronomy
title Spectroscopic properties and the nature of reduction products of bacteriochlorophyll in solution and in the photosynthetic reaction center of Rhodobacter Sphaeroides
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-22T03%3A48%3A00IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-crossref_sprin&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Spectroscopic%20properties%20and%20the%20nature%20of%20reduction%20products%20of%20bacteriochlorophyll%20in%20solution%20and%20in%20the%20photosynthetic%20reaction%20center%20of%20Rhodobacter%20Sphaeroides&rft.jtitle=Optics%20and%20spectroscopy&rft.au=Ivashin,%20N.%20V.&rft.date=2012-02-01&rft.volume=112&rft.issue=2&rft.spage=212&rft.epage=222&rft.pages=212-222&rft.issn=0030-400X&rft.eissn=1562-6911&rft_id=info:doi/10.1134/S0030400X12020130&rft_dat=%3Ccrossref_sprin%3E10_1134_S0030400X12020130%3C/crossref_sprin%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true