An Arabidopsis divergent pumilio protein, APUM 24, is essential for embryogenesis and required for faithful pre‐ rRNA processing

Pumilio RNA ‐binding proteins are largely involved in mRNA degradation and translation repression. However, a few evolutionarily divergent Pumilios are also responsible for proper pre‐ rRNA processing in human and yeast. Here, we describe an essential Arabidopsis nucleolar Pumilio, APUM 24, that is...

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Veröffentlicht in:The Plant journal : for cell and molecular biology 2017-12, Vol.92 (6), p.1092-1105
Hauptverfasser: Shanmugam, Thiruvenkadam, Abbasi, Nazia, Kim, Hyung‐Sae, Kim, Ho Bang, Park, Nam‐il, Park, Guen Tae, Oh, Sung Aeong, Park, Soon Ki, Muench, Douglas G., Choi, Yeonhee, Park, Youn‐Il, Choi, Sang‐Bong
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container_issue 6
container_start_page 1092
container_title The Plant journal : for cell and molecular biology
container_volume 92
creator Shanmugam, Thiruvenkadam
Abbasi, Nazia
Kim, Hyung‐Sae
Kim, Ho Bang
Park, Nam‐il
Park, Guen Tae
Oh, Sung Aeong
Park, Soon Ki
Muench, Douglas G.
Choi, Yeonhee
Park, Youn‐Il
Choi, Sang‐Bong
description Pumilio RNA ‐binding proteins are largely involved in mRNA degradation and translation repression. However, a few evolutionarily divergent Pumilios are also responsible for proper pre‐ rRNA processing in human and yeast. Here, we describe an essential Arabidopsis nucleolar Pumilio, APUM 24, that is expressed in tissues undergoing rapid proliferation and cell division. A T‐ DNA insertion for APUM 24 did not affect the male and female gametogenesis, but instead resulted in a negative female gametophytic effect on zygotic cell division immediately after fertilization. Additionally, the mutant embryos displayed defects in cell patterning from pro‐embryo through globular stages. The mutant embryos were marked by altered auxin maxima, which were substantiated by the mislocalization of PIN 1 and PIN 7 transporters in the defective embryos. Homozygous apum24 callus accumulates rRNA processing intermediates, including uridylated and adenylated 5.8S and 25S rRNA precursors. An RNA –protein interaction assay showed that the histidine‐tagged recombinant APUM 24 binds RNA in vitro with no apparent specificity. Overall, our results demonstrated that APUM 24 is required for rRNA processing and early embryogenesis in Arabidopsis. Pumilio RNA ‐binding proteins possess multiple tandem repeat Puf domains, and participate in RNA degradation and/or translation repression. Twentyfive Pumilios are found in Arabidopsis, however their functions are largely unknown. Here, we show that nucleolar Pumilio APUM 24 is implicated in the processing of 27 SB and 5.8S precursor rRNA s. The apum24 mutant embryo is lethal before globular stage, emphasizing the essential role of APUM 24 during developmental process in Arabidopsis.
doi_str_mv 10.1111/tpj.13745
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However, a few evolutionarily divergent Pumilios are also responsible for proper pre‐ rRNA processing in human and yeast. Here, we describe an essential Arabidopsis nucleolar Pumilio, APUM 24, that is expressed in tissues undergoing rapid proliferation and cell division. A T‐ DNA insertion for APUM 24 did not affect the male and female gametogenesis, but instead resulted in a negative female gametophytic effect on zygotic cell division immediately after fertilization. Additionally, the mutant embryos displayed defects in cell patterning from pro‐embryo through globular stages. The mutant embryos were marked by altered auxin maxima, which were substantiated by the mislocalization of PIN 1 and PIN 7 transporters in the defective embryos. Homozygous apum24 callus accumulates rRNA processing intermediates, including uridylated and adenylated 5.8S and 25S rRNA precursors. An RNA –protein interaction assay showed that the histidine‐tagged recombinant APUM 24 binds RNA in vitro with no apparent specificity. Overall, our results demonstrated that APUM 24 is required for rRNA processing and early embryogenesis in Arabidopsis. Pumilio RNA ‐binding proteins possess multiple tandem repeat Puf domains, and participate in RNA degradation and/or translation repression. Twentyfive Pumilios are found in Arabidopsis, however their functions are largely unknown. Here, we show that nucleolar Pumilio APUM 24 is implicated in the processing of 27 SB and 5.8S precursor rRNA s. 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title An Arabidopsis divergent pumilio protein, APUM 24, is essential for embryogenesis and required for faithful pre‐ rRNA processing
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