Evaluation of the fluorescent probes N ile R ed and 25‐NBD‐cholesterol as substrates for steroid‐converting oxidoreductases using pure enzymes and microorganisms

The fluorescent probes N ile R ed (nonsteroidal dye) and 25‐{ N ‐[(7‐nitrobenz‐2‐oxa‐1,3‐diazol‐4‐yl)‐methyl]amino}‐27‐norcholesterol (25‐ NBD ‐cholesterol) (a cholesterol analog) were evaluated as novel substrates for steroid‐converting oxidoreductases. Docking simulations with autodock showed that...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:The FEBS journal 2013-07, Vol.280 (13), p.3109-3119
Hauptverfasser: Faletrov, Yaroslav V., Frolova, Nina S., Hlushko, Hanna V., Rudaya, Elena V., Edimecheva, Irina P., Mauersberger, Stephan, Shkumatov, Vladimir M.
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 3119
container_issue 13
container_start_page 3109
container_title The FEBS journal
container_volume 280
creator Faletrov, Yaroslav V.
Frolova, Nina S.
Hlushko, Hanna V.
Rudaya, Elena V.
Edimecheva, Irina P.
Mauersberger, Stephan
Shkumatov, Vladimir M.
description The fluorescent probes N ile R ed (nonsteroidal dye) and 25‐{ N ‐[(7‐nitrobenz‐2‐oxa‐1,3‐diazol‐4‐yl)‐methyl]amino}‐27‐norcholesterol (25‐ NBD ‐cholesterol) (a cholesterol analog) were evaluated as novel substrates for steroid‐converting oxidoreductases. Docking simulations with autodock showed that Nile Red fits well into the substrate‐binding site of cytochrome P450 17α‐hydroxylase/17,20‐lyase ( CYP 17A1) (binding energy value of −8.3 kcal·mol −1 ). Recombinant S accharomyces cerevisiae and Y arrowia lipolytica , both expressing CYP 17A1, were found to catalyze the conversion of N ile R ed into two N ‐dealkylated derivatives. The conversion by the yeasts was shown to increase in the cases of coexpression of electron‐donating partners of CYP 17A1. The highest specific activity value (1.30 ± 0.02 min −1 ) was achieved for the strain Y. lipolytica   DC 5, expressing CYP 17A1 and the yeast's NADPH ‐cytochrome P450 reductase. The dye was also metabolized by pure CYP 17A1 into the N‐dealkylated derivatives, and gave a type I difference spectrum when titrated into low‐spin CYP 17A1. Analogously, docking simulations demonstrated that 25‐ NBD ‐cholesterol binds into the active site of the microbial cholesterol oxidase ( CHOX ) from B revibacterium sterolicum (binding energy value of −5.6 kcal·mol −1 ). The steroid was found to be converted into its 4‐en‐3‐one derivative by CHOX ( K m and k cat values were estimated to be 58.1 ± 5.9 μ m and 0.66 ± 0.14 s −1 , respectively). The 4‐en‐3‐one derivative was also detected as the product of 25‐ NBD ‐cholesterol oxidation with both pure microbial cholesterol dehydrogenase ( CHDH ) and a pathogenic bacterium, P seudomonas aeruginosa , possessing CHOX s and CHDH s. These results provide novel opportunities for investigation of the structure–function relationships of the aforementioned oxidoreductases, which catalyze essential steps of steroid bioconversion in mammals ( CYP 17A1) and bacteria ( CHOX and CHDH ), with fluorescence‐based techniques.
doi_str_mv 10.1111/febs.12265
format Article
fullrecord <record><control><sourceid>crossref</sourceid><recordid>TN_cdi_crossref_primary_10_1111_febs_12265</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>10_1111_febs_12265</sourcerecordid><originalsourceid>FETCH-LOGICAL-c765-dccaa2ab95d5d25037995a41f55b7142cb4c47f184f8f349c2863ae27d70f55a3</originalsourceid><addsrcrecordid>eNo9UMtOwzAQtBBIlMKFL_AZqRA7dh5HKOUhVUVCPXCLHD9aoySuvE5FOfEJ_AX_xZfgFMQedlezMzvSIHROkksS68roGi4JpRk_QCOSMzphGS8O_3f2coxOAF6TJOWsLEfoa7YVTS-CdR12Boe1xqbpndcgdRfwxrtaA15g22j8jLXColOY8u-Pz8XNbexy7RoNQXvXYAEY-hqCFyFqjPN4f7Bq4Lluq32w3Qq7N6uigeplEBCJPQzopvca6-5910ZoMGmt9M75legstHCKjoxoQJ_9zTFa3s2W04fJ_On-cXo9n8g84xMlpRBU1CVXXFGepHlZcsGI4bzOCaOyZpLlhhTMFCZlpaRFlgpNc5UnkSPSMbr4fRu9Abw21cbbVvhdRZJqSLgaEq72Cac_U_t2gg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Evaluation of the fluorescent probes N ile R ed and 25‐NBD‐cholesterol as substrates for steroid‐converting oxidoreductases using pure enzymes and microorganisms</title><source>Access via Wiley Online Library</source><source>IngentaConnect Free/Open Access Journals</source><source>Wiley Online Library (Open Access Collection)</source><source>Free Full-Text Journals in Chemistry</source><creator>Faletrov, Yaroslav V. ; Frolova, Nina S. ; Hlushko, Hanna V. ; Rudaya, Elena V. ; Edimecheva, Irina P. ; Mauersberger, Stephan ; Shkumatov, Vladimir M.</creator><creatorcontrib>Faletrov, Yaroslav V. ; Frolova, Nina S. ; Hlushko, Hanna V. ; Rudaya, Elena V. ; Edimecheva, Irina P. ; Mauersberger, Stephan ; Shkumatov, Vladimir M.</creatorcontrib><description>The fluorescent probes N ile R ed (nonsteroidal dye) and 25‐{ N ‐[(7‐nitrobenz‐2‐oxa‐1,3‐diazol‐4‐yl)‐methyl]amino}‐27‐norcholesterol (25‐ NBD ‐cholesterol) (a cholesterol analog) were evaluated as novel substrates for steroid‐converting oxidoreductases. Docking simulations with autodock showed that Nile Red fits well into the substrate‐binding site of cytochrome P450 17α‐hydroxylase/17,20‐lyase ( CYP 17A1) (binding energy value of −8.3 kcal·mol −1 ). Recombinant S accharomyces cerevisiae and Y arrowia lipolytica , both expressing CYP 17A1, were found to catalyze the conversion of N ile R ed into two N ‐dealkylated derivatives. The conversion by the yeasts was shown to increase in the cases of coexpression of electron‐donating partners of CYP 17A1. The highest specific activity value (1.30 ± 0.02 min −1 ) was achieved for the strain Y. lipolytica   DC 5, expressing CYP 17A1 and the yeast's NADPH ‐cytochrome P450 reductase. The dye was also metabolized by pure CYP 17A1 into the N‐dealkylated derivatives, and gave a type I difference spectrum when titrated into low‐spin CYP 17A1. Analogously, docking simulations demonstrated that 25‐ NBD ‐cholesterol binds into the active site of the microbial cholesterol oxidase ( CHOX ) from B revibacterium sterolicum (binding energy value of −5.6 kcal·mol −1 ). The steroid was found to be converted into its 4‐en‐3‐one derivative by CHOX ( K m and k cat values were estimated to be 58.1 ± 5.9 μ m and 0.66 ± 0.14 s −1 , respectively). The 4‐en‐3‐one derivative was also detected as the product of 25‐ NBD ‐cholesterol oxidation with both pure microbial cholesterol dehydrogenase ( CHDH ) and a pathogenic bacterium, P seudomonas aeruginosa , possessing CHOX s and CHDH s. These results provide novel opportunities for investigation of the structure–function relationships of the aforementioned oxidoreductases, which catalyze essential steps of steroid bioconversion in mammals ( CYP 17A1) and bacteria ( CHOX and CHDH ), with fluorescence‐based techniques.</description><identifier>ISSN: 1742-464X</identifier><identifier>EISSN: 1742-4658</identifier><identifier>DOI: 10.1111/febs.12265</identifier><language>eng</language><ispartof>The FEBS journal, 2013-07, Vol.280 (13), p.3109-3119</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c765-dccaa2ab95d5d25037995a41f55b7142cb4c47f184f8f349c2863ae27d70f55a3</citedby><cites>FETCH-LOGICAL-c765-dccaa2ab95d5d25037995a41f55b7142cb4c47f184f8f349c2863ae27d70f55a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Faletrov, Yaroslav V.</creatorcontrib><creatorcontrib>Frolova, Nina S.</creatorcontrib><creatorcontrib>Hlushko, Hanna V.</creatorcontrib><creatorcontrib>Rudaya, Elena V.</creatorcontrib><creatorcontrib>Edimecheva, Irina P.</creatorcontrib><creatorcontrib>Mauersberger, Stephan</creatorcontrib><creatorcontrib>Shkumatov, Vladimir M.</creatorcontrib><title>Evaluation of the fluorescent probes N ile R ed and 25‐NBD‐cholesterol as substrates for steroid‐converting oxidoreductases using pure enzymes and microorganisms</title><title>The FEBS journal</title><description>The fluorescent probes N ile R ed (nonsteroidal dye) and 25‐{ N ‐[(7‐nitrobenz‐2‐oxa‐1,3‐diazol‐4‐yl)‐methyl]amino}‐27‐norcholesterol (25‐ NBD ‐cholesterol) (a cholesterol analog) were evaluated as novel substrates for steroid‐converting oxidoreductases. Docking simulations with autodock showed that Nile Red fits well into the substrate‐binding site of cytochrome P450 17α‐hydroxylase/17,20‐lyase ( CYP 17A1) (binding energy value of −8.3 kcal·mol −1 ). Recombinant S accharomyces cerevisiae and Y arrowia lipolytica , both expressing CYP 17A1, were found to catalyze the conversion of N ile R ed into two N ‐dealkylated derivatives. The conversion by the yeasts was shown to increase in the cases of coexpression of electron‐donating partners of CYP 17A1. The highest specific activity value (1.30 ± 0.02 min −1 ) was achieved for the strain Y. lipolytica   DC 5, expressing CYP 17A1 and the yeast's NADPH ‐cytochrome P450 reductase. The dye was also metabolized by pure CYP 17A1 into the N‐dealkylated derivatives, and gave a type I difference spectrum when titrated into low‐spin CYP 17A1. Analogously, docking simulations demonstrated that 25‐ NBD ‐cholesterol binds into the active site of the microbial cholesterol oxidase ( CHOX ) from B revibacterium sterolicum (binding energy value of −5.6 kcal·mol −1 ). The steroid was found to be converted into its 4‐en‐3‐one derivative by CHOX ( K m and k cat values were estimated to be 58.1 ± 5.9 μ m and 0.66 ± 0.14 s −1 , respectively). The 4‐en‐3‐one derivative was also detected as the product of 25‐ NBD ‐cholesterol oxidation with both pure microbial cholesterol dehydrogenase ( CHDH ) and a pathogenic bacterium, P seudomonas aeruginosa , possessing CHOX s and CHDH s. These results provide novel opportunities for investigation of the structure–function relationships of the aforementioned oxidoreductases, which catalyze essential steps of steroid bioconversion in mammals ( CYP 17A1) and bacteria ( CHOX and CHDH ), with fluorescence‐based techniques.</description><issn>1742-464X</issn><issn>1742-4658</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><recordid>eNo9UMtOwzAQtBBIlMKFL_AZqRA7dh5HKOUhVUVCPXCLHD9aoySuvE5FOfEJ_AX_xZfgFMQedlezMzvSIHROkksS68roGi4JpRk_QCOSMzphGS8O_3f2coxOAF6TJOWsLEfoa7YVTS-CdR12Boe1xqbpndcgdRfwxrtaA15g22j8jLXColOY8u-Pz8XNbexy7RoNQXvXYAEY-hqCFyFqjPN4f7Bq4Lluq32w3Qq7N6uigeplEBCJPQzopvca6-5910ZoMGmt9M75legstHCKjoxoQJ_9zTFa3s2W04fJ_On-cXo9n8g84xMlpRBU1CVXXFGepHlZcsGI4bzOCaOyZpLlhhTMFCZlpaRFlgpNc5UnkSPSMbr4fRu9Abw21cbbVvhdRZJqSLgaEq72Cac_U_t2gg</recordid><startdate>201307</startdate><enddate>201307</enddate><creator>Faletrov, Yaroslav V.</creator><creator>Frolova, Nina S.</creator><creator>Hlushko, Hanna V.</creator><creator>Rudaya, Elena V.</creator><creator>Edimecheva, Irina P.</creator><creator>Mauersberger, Stephan</creator><creator>Shkumatov, Vladimir M.</creator><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>201307</creationdate><title>Evaluation of the fluorescent probes N ile R ed and 25‐NBD‐cholesterol as substrates for steroid‐converting oxidoreductases using pure enzymes and microorganisms</title><author>Faletrov, Yaroslav V. ; Frolova, Nina S. ; Hlushko, Hanna V. ; Rudaya, Elena V. ; Edimecheva, Irina P. ; Mauersberger, Stephan ; Shkumatov, Vladimir M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c765-dccaa2ab95d5d25037995a41f55b7142cb4c47f184f8f349c2863ae27d70f55a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Faletrov, Yaroslav V.</creatorcontrib><creatorcontrib>Frolova, Nina S.</creatorcontrib><creatorcontrib>Hlushko, Hanna V.</creatorcontrib><creatorcontrib>Rudaya, Elena V.</creatorcontrib><creatorcontrib>Edimecheva, Irina P.</creatorcontrib><creatorcontrib>Mauersberger, Stephan</creatorcontrib><creatorcontrib>Shkumatov, Vladimir M.</creatorcontrib><collection>CrossRef</collection><jtitle>The FEBS journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Faletrov, Yaroslav V.</au><au>Frolova, Nina S.</au><au>Hlushko, Hanna V.</au><au>Rudaya, Elena V.</au><au>Edimecheva, Irina P.</au><au>Mauersberger, Stephan</au><au>Shkumatov, Vladimir M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evaluation of the fluorescent probes N ile R ed and 25‐NBD‐cholesterol as substrates for steroid‐converting oxidoreductases using pure enzymes and microorganisms</atitle><jtitle>The FEBS journal</jtitle><date>2013-07</date><risdate>2013</risdate><volume>280</volume><issue>13</issue><spage>3109</spage><epage>3119</epage><pages>3109-3119</pages><issn>1742-464X</issn><eissn>1742-4658</eissn><abstract>The fluorescent probes N ile R ed (nonsteroidal dye) and 25‐{ N ‐[(7‐nitrobenz‐2‐oxa‐1,3‐diazol‐4‐yl)‐methyl]amino}‐27‐norcholesterol (25‐ NBD ‐cholesterol) (a cholesterol analog) were evaluated as novel substrates for steroid‐converting oxidoreductases. Docking simulations with autodock showed that Nile Red fits well into the substrate‐binding site of cytochrome P450 17α‐hydroxylase/17,20‐lyase ( CYP 17A1) (binding energy value of −8.3 kcal·mol −1 ). Recombinant S accharomyces cerevisiae and Y arrowia lipolytica , both expressing CYP 17A1, were found to catalyze the conversion of N ile R ed into two N ‐dealkylated derivatives. The conversion by the yeasts was shown to increase in the cases of coexpression of electron‐donating partners of CYP 17A1. The highest specific activity value (1.30 ± 0.02 min −1 ) was achieved for the strain Y. lipolytica   DC 5, expressing CYP 17A1 and the yeast's NADPH ‐cytochrome P450 reductase. The dye was also metabolized by pure CYP 17A1 into the N‐dealkylated derivatives, and gave a type I difference spectrum when titrated into low‐spin CYP 17A1. Analogously, docking simulations demonstrated that 25‐ NBD ‐cholesterol binds into the active site of the microbial cholesterol oxidase ( CHOX ) from B revibacterium sterolicum (binding energy value of −5.6 kcal·mol −1 ). The steroid was found to be converted into its 4‐en‐3‐one derivative by CHOX ( K m and k cat values were estimated to be 58.1 ± 5.9 μ m and 0.66 ± 0.14 s −1 , respectively). The 4‐en‐3‐one derivative was also detected as the product of 25‐ NBD ‐cholesterol oxidation with both pure microbial cholesterol dehydrogenase ( CHDH ) and a pathogenic bacterium, P seudomonas aeruginosa , possessing CHOX s and CHDH s. These results provide novel opportunities for investigation of the structure–function relationships of the aforementioned oxidoreductases, which catalyze essential steps of steroid bioconversion in mammals ( CYP 17A1) and bacteria ( CHOX and CHDH ), with fluorescence‐based techniques.</abstract><doi>10.1111/febs.12265</doi><tpages>11</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1742-464X
ispartof The FEBS journal, 2013-07, Vol.280 (13), p.3109-3119
issn 1742-464X
1742-4658
language eng
recordid cdi_crossref_primary_10_1111_febs_12265
source Access via Wiley Online Library; IngentaConnect Free/Open Access Journals; Wiley Online Library (Open Access Collection); Free Full-Text Journals in Chemistry
title Evaluation of the fluorescent probes N ile R ed and 25‐NBD‐cholesterol as substrates for steroid‐converting oxidoreductases using pure enzymes and microorganisms
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-27T18%3A41%3A48IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-crossref&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Evaluation%20of%20the%20fluorescent%20probes%20N%20ile%20R%20ed%20and%2025%E2%80%90NBD%E2%80%90cholesterol%20as%20substrates%20for%20steroid%E2%80%90converting%20oxidoreductases%20using%20pure%20enzymes%20and%20microorganisms&rft.jtitle=The%20FEBS%20journal&rft.au=Faletrov,%20Yaroslav%20V.&rft.date=2013-07&rft.volume=280&rft.issue=13&rft.spage=3109&rft.epage=3119&rft.pages=3109-3119&rft.issn=1742-464X&rft.eissn=1742-4658&rft_id=info:doi/10.1111/febs.12265&rft_dat=%3Ccrossref%3E10_1111_febs_12265%3C/crossref%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true