Closing the gaps on the viral photosystem‐ I psa DCAB gene organization
Marine photosynthesis is largely driven by cyanobacteria, namely S ynechococcus and P rochlorococcus . Genes encoding for photosystem ( PS ) I and II reaction centre proteins are found in cyanophages and are believed to increase their fitness. Two viral PSI gene arrangements are known, psaJF→ C →A→...
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Veröffentlicht in: | Environmental microbiology 2015-12, Vol.17 (12), p.5100-5108 |
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Sprache: | eng |
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Zusammenfassung: | Marine photosynthesis is largely driven by cyanobacteria, namely
S
ynechococcus
and
P
rochlorococcus
. Genes encoding for photosystem (
PS
)
I
and
II
reaction centre proteins are found in cyanophages and are believed to increase their fitness. Two viral
PSI
gene arrangements are known,
psaJF→
C
→A→
B
→
K
→
E
→
D
and
psaD→
C
→A→
B
. The shared genes between these gene cassettes and their encoded proteins are distinguished by %G +
C
and protein sequence respectively. The data on the
psaD→
C
→A→
B
gene organization were reported from only two partial gene cassettes coming from Global Ocean Sampling stations in the
P
acific and
I
ndian oceans. Now we have extended our search to 370 marine stations from six metagenomic projects. Genes corresponding to both
PSI
gene arrangements were detected in the
P
acific,
I
ndian and
A
tlantic oceans, confined to a strip along the equator (30°N and 30°S). In addition, we found that the predicted structure of the viral
PsaA
protein from the
psaD→
C
→
A
→
B
organization contains a lumenal loop conserved in
PsaA
proteins from
S
ynechococcus
, but is completely absent in viral
PsaA
proteins from the
psaJF→
C
→
A
→
B
→
K
→
E
→
D
gene organization and most
P
rochlorococcus
strains. This may indicate a co‐evolutionary scenario where cyanophages containing either of these gene organizations infect cyanobacterial ecotypes biogeographically restricted to the 30°N and 30°S equatorial strip. |
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ISSN: | 1462-2912 1462-2920 |
DOI: | 10.1111/1462-2920.13036 |