Multiscale Vascular Enhancement Filter Applied to In Vivo Morphologic and Functional Photoacoustic Imaging of Rat Ocular Vasculature
Optical-resolution photoacoustic microscopy (OR-PAM) is used for in vivo imaging of a variety of albino and pigmented eyes taking advantages of requiring no exogenous dye, performing high-resolution imaging, and achieving morphologic and functional imaging at the same time. However, to accurately di...
Gespeichert in:
Veröffentlicht in: | IEEE photonics journal 2019-12, Vol.11 (6), p.1-12 |
---|---|
Hauptverfasser: | , , , , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 12 |
---|---|
container_issue | 6 |
container_start_page | 1 |
container_title | IEEE photonics journal |
container_volume | 11 |
creator | Zhao, Huangxuan Liu, Chengbo Li, Ke Chen, Ningbo Zhang, Kunya Wang, Lidai Lin, Riqiang Gong, Xiaojing Song, Liang Liu, Zhicheng |
description | Optical-resolution photoacoustic microscopy (OR-PAM) is used for in vivo imaging of a variety of albino and pigmented eyes taking advantages of requiring no exogenous dye, performing high-resolution imaging, and achieving morphologic and functional imaging at the same time. However, to accurately diagnose the ophthalmic disease in the OR-PAM images, vascular enhancement algorithms are necessary for extracting vessels and quantifying them correctly. Vascular enhancement algorithms developed for other imaging technologies, are not suitable to be used for OR-PAM, because of the underlying differences in the physics of the formation of images. In this study, a new vascular enhancement algorithm called photoacoustic imaging vasculature enhancement filter (PAIVEF) is proposed, which not only enhances vasculature including micro-vessels signals, suppresses noise signals effectively, but also achieves highly sensitive and accurate enhancement of the vasculature within a large depth range in and out of the system's depth of focus (DOF). Using the PAIVEF, the morphologic and functional 3D images of the whole rat's ocular anterior vasculature segment was displayed simultaneously for a depth range of ~0.6 mm, which was ~7 times of the system's DOF. This study paves the way for the application of OR-PAM technology in ophthalmic disease research. |
doi_str_mv | 10.1109/JPHOT.2019.2948955 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1109_JPHOT_2019_2948955</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><ieee_id>8879490</ieee_id><doaj_id>oai_doaj_org_article_02ea3a0519e64cb48537f272dfb62be1</doaj_id><sourcerecordid>2322872181</sourcerecordid><originalsourceid>FETCH-LOGICAL-c361t-88135904b461dfdae875fe9d70ec1871b55f7156c7ccdea61a0b35e1879083a73</originalsourceid><addsrcrecordid>eNpNUU1r3DAQNaWFpmn-QHsR9LxbfViWdAwhm2xJ2FCSXMVYHu9q8VquJAdy7w-vN15CTzPMm_feDK8ovjG6ZIyan78ebjePS06ZWXJTaiPlh-KMmVIsaCXlx__6z8WXlPaUVoZJc1b8vR-77JODDskzJDd2EMl1v4Pe4QH7TFa-yxjJ5TB0HhuSA1n35Nm_BHIf4rALXdh6R6BvyGrsXfahh4487EIO4MKY8gSuD7D1_ZaElvyGTDazycktjxG_Fp9a6BJenOp58bS6fry6XdxtbtZXl3cLJyqWF1ozIQ0t67JiTdsAaiVbNI2i6JhWrJayVUxWTjnXIFQMaC0kTpChWoAS58V61m0C7O0Q_QHiqw3g7dsgxK2FOF3coaUcQQCVzGBVurrUUqiWK960dcVrZJPWj1lriOHPiCnbfRjj9HyyXHCuFWf6uMXnLRdDShHbd1dG7TE5-5acPSZnT8lNpO8zySPiO0FPb5SGin_SdJYr</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2322872181</pqid></control><display><type>article</type><title>Multiscale Vascular Enhancement Filter Applied to In Vivo Morphologic and Functional Photoacoustic Imaging of Rat Ocular Vasculature</title><source>IEEE Open Access Journals</source><source>DOAJ Directory of Open Access Journals</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Zhao, Huangxuan ; Liu, Chengbo ; Li, Ke ; Chen, Ningbo ; Zhang, Kunya ; Wang, Lidai ; Lin, Riqiang ; Gong, Xiaojing ; Song, Liang ; Liu, Zhicheng</creator><creatorcontrib>Zhao, Huangxuan ; Liu, Chengbo ; Li, Ke ; Chen, Ningbo ; Zhang, Kunya ; Wang, Lidai ; Lin, Riqiang ; Gong, Xiaojing ; Song, Liang ; Liu, Zhicheng</creatorcontrib><description>Optical-resolution photoacoustic microscopy (OR-PAM) is used for in vivo imaging of a variety of albino and pigmented eyes taking advantages of requiring no exogenous dye, performing high-resolution imaging, and achieving morphologic and functional imaging at the same time. However, to accurately diagnose the ophthalmic disease in the OR-PAM images, vascular enhancement algorithms are necessary for extracting vessels and quantifying them correctly. Vascular enhancement algorithms developed for other imaging technologies, are not suitable to be used for OR-PAM, because of the underlying differences in the physics of the formation of images. In this study, a new vascular enhancement algorithm called photoacoustic imaging vasculature enhancement filter (PAIVEF) is proposed, which not only enhances vasculature including micro-vessels signals, suppresses noise signals effectively, but also achieves highly sensitive and accurate enhancement of the vasculature within a large depth range in and out of the system's depth of focus (DOF). Using the PAIVEF, the morphologic and functional 3D images of the whole rat's ocular anterior vasculature segment was displayed simultaneously for a depth range of ~0.6 mm, which was ~7 times of the system's DOF. This study paves the way for the application of OR-PAM technology in ophthalmic disease research.</description><identifier>ISSN: 1943-0655</identifier><identifier>EISSN: 1943-0655</identifier><identifier>EISSN: 1943-0647</identifier><identifier>DOI: 10.1109/JPHOT.2019.2948955</identifier><identifier>CODEN: PJHOC3</identifier><language>eng</language><publisher>Piscataway: IEEE</publisher><subject>Algorithms ; Blood vessels ; Depth of field ; Diseases ; Eye (anatomy) ; Image enhancement ; Image resolution ; morphologic and functional imaging ; ocular vasculature ; Optical filters ; Optical imaging ; Photoacoustic imaging ; Photoacoustic microscopy ; Three-dimensional displays ; vascular enhancement filter</subject><ispartof>IEEE photonics journal, 2019-12, Vol.11 (6), p.1-12</ispartof><rights>Copyright The Institute of Electrical and Electronics Engineers, Inc. (IEEE) 2019</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c361t-88135904b461dfdae875fe9d70ec1871b55f7156c7ccdea61a0b35e1879083a73</citedby><cites>FETCH-LOGICAL-c361t-88135904b461dfdae875fe9d70ec1871b55f7156c7ccdea61a0b35e1879083a73</cites><orcidid>0000-0002-8221-3522 ; 0000-0002-9995-7528 ; 0000-0002-0352-3419 ; 0000-0001-7565-2044</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/8879490$$EHTML$$P50$$Gieee$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,860,2096,27610,27901,27902,54908</link.rule.ids></links><search><creatorcontrib>Zhao, Huangxuan</creatorcontrib><creatorcontrib>Liu, Chengbo</creatorcontrib><creatorcontrib>Li, Ke</creatorcontrib><creatorcontrib>Chen, Ningbo</creatorcontrib><creatorcontrib>Zhang, Kunya</creatorcontrib><creatorcontrib>Wang, Lidai</creatorcontrib><creatorcontrib>Lin, Riqiang</creatorcontrib><creatorcontrib>Gong, Xiaojing</creatorcontrib><creatorcontrib>Song, Liang</creatorcontrib><creatorcontrib>Liu, Zhicheng</creatorcontrib><title>Multiscale Vascular Enhancement Filter Applied to In Vivo Morphologic and Functional Photoacoustic Imaging of Rat Ocular Vasculature</title><title>IEEE photonics journal</title><addtitle>JPHOT</addtitle><description>Optical-resolution photoacoustic microscopy (OR-PAM) is used for in vivo imaging of a variety of albino and pigmented eyes taking advantages of requiring no exogenous dye, performing high-resolution imaging, and achieving morphologic and functional imaging at the same time. However, to accurately diagnose the ophthalmic disease in the OR-PAM images, vascular enhancement algorithms are necessary for extracting vessels and quantifying them correctly. Vascular enhancement algorithms developed for other imaging technologies, are not suitable to be used for OR-PAM, because of the underlying differences in the physics of the formation of images. In this study, a new vascular enhancement algorithm called photoacoustic imaging vasculature enhancement filter (PAIVEF) is proposed, which not only enhances vasculature including micro-vessels signals, suppresses noise signals effectively, but also achieves highly sensitive and accurate enhancement of the vasculature within a large depth range in and out of the system's depth of focus (DOF). Using the PAIVEF, the morphologic and functional 3D images of the whole rat's ocular anterior vasculature segment was displayed simultaneously for a depth range of ~0.6 mm, which was ~7 times of the system's DOF. This study paves the way for the application of OR-PAM technology in ophthalmic disease research.</description><subject>Algorithms</subject><subject>Blood vessels</subject><subject>Depth of field</subject><subject>Diseases</subject><subject>Eye (anatomy)</subject><subject>Image enhancement</subject><subject>Image resolution</subject><subject>morphologic and functional imaging</subject><subject>ocular vasculature</subject><subject>Optical filters</subject><subject>Optical imaging</subject><subject>Photoacoustic imaging</subject><subject>Photoacoustic microscopy</subject><subject>Three-dimensional displays</subject><subject>vascular enhancement filter</subject><issn>1943-0655</issn><issn>1943-0655</issn><issn>1943-0647</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>ESBDL</sourceid><sourceid>RIE</sourceid><sourceid>DOA</sourceid><recordid>eNpNUU1r3DAQNaWFpmn-QHsR9LxbfViWdAwhm2xJ2FCSXMVYHu9q8VquJAdy7w-vN15CTzPMm_feDK8ovjG6ZIyan78ebjePS06ZWXJTaiPlh-KMmVIsaCXlx__6z8WXlPaUVoZJc1b8vR-77JODDskzJDd2EMl1v4Pe4QH7TFa-yxjJ5TB0HhuSA1n35Nm_BHIf4rALXdh6R6BvyGrsXfahh4487EIO4MKY8gSuD7D1_ZaElvyGTDazycktjxG_Fp9a6BJenOp58bS6fry6XdxtbtZXl3cLJyqWF1ozIQ0t67JiTdsAaiVbNI2i6JhWrJayVUxWTjnXIFQMaC0kTpChWoAS58V61m0C7O0Q_QHiqw3g7dsgxK2FOF3coaUcQQCVzGBVurrUUqiWK960dcVrZJPWj1lriOHPiCnbfRjj9HyyXHCuFWf6uMXnLRdDShHbd1dG7TE5-5acPSZnT8lNpO8zySPiO0FPb5SGin_SdJYr</recordid><startdate>20191201</startdate><enddate>20191201</enddate><creator>Zhao, Huangxuan</creator><creator>Liu, Chengbo</creator><creator>Li, Ke</creator><creator>Chen, Ningbo</creator><creator>Zhang, Kunya</creator><creator>Wang, Lidai</creator><creator>Lin, Riqiang</creator><creator>Gong, Xiaojing</creator><creator>Song, Liang</creator><creator>Liu, Zhicheng</creator><general>IEEE</general><general>The Institute of Electrical and Electronics Engineers, Inc. (IEEE)</general><scope>97E</scope><scope>ESBDL</scope><scope>RIA</scope><scope>RIE</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SP</scope><scope>7U5</scope><scope>8FD</scope><scope>H8D</scope><scope>L7M</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-8221-3522</orcidid><orcidid>https://orcid.org/0000-0002-9995-7528</orcidid><orcidid>https://orcid.org/0000-0002-0352-3419</orcidid><orcidid>https://orcid.org/0000-0001-7565-2044</orcidid></search><sort><creationdate>20191201</creationdate><title>Multiscale Vascular Enhancement Filter Applied to In Vivo Morphologic and Functional Photoacoustic Imaging of Rat Ocular Vasculature</title><author>Zhao, Huangxuan ; Liu, Chengbo ; Li, Ke ; Chen, Ningbo ; Zhang, Kunya ; Wang, Lidai ; Lin, Riqiang ; Gong, Xiaojing ; Song, Liang ; Liu, Zhicheng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c361t-88135904b461dfdae875fe9d70ec1871b55f7156c7ccdea61a0b35e1879083a73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Algorithms</topic><topic>Blood vessels</topic><topic>Depth of field</topic><topic>Diseases</topic><topic>Eye (anatomy)</topic><topic>Image enhancement</topic><topic>Image resolution</topic><topic>morphologic and functional imaging</topic><topic>ocular vasculature</topic><topic>Optical filters</topic><topic>Optical imaging</topic><topic>Photoacoustic imaging</topic><topic>Photoacoustic microscopy</topic><topic>Three-dimensional displays</topic><topic>vascular enhancement filter</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Huangxuan</creatorcontrib><creatorcontrib>Liu, Chengbo</creatorcontrib><creatorcontrib>Li, Ke</creatorcontrib><creatorcontrib>Chen, Ningbo</creatorcontrib><creatorcontrib>Zhang, Kunya</creatorcontrib><creatorcontrib>Wang, Lidai</creatorcontrib><creatorcontrib>Lin, Riqiang</creatorcontrib><creatorcontrib>Gong, Xiaojing</creatorcontrib><creatorcontrib>Song, Liang</creatorcontrib><creatorcontrib>Liu, Zhicheng</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE Open Access Journals</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Electronic Library (IEL)</collection><collection>CrossRef</collection><collection>Electronics & Communications Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>Aerospace Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>IEEE photonics journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Huangxuan</au><au>Liu, Chengbo</au><au>Li, Ke</au><au>Chen, Ningbo</au><au>Zhang, Kunya</au><au>Wang, Lidai</au><au>Lin, Riqiang</au><au>Gong, Xiaojing</au><au>Song, Liang</au><au>Liu, Zhicheng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Multiscale Vascular Enhancement Filter Applied to In Vivo Morphologic and Functional Photoacoustic Imaging of Rat Ocular Vasculature</atitle><jtitle>IEEE photonics journal</jtitle><stitle>JPHOT</stitle><date>2019-12-01</date><risdate>2019</risdate><volume>11</volume><issue>6</issue><spage>1</spage><epage>12</epage><pages>1-12</pages><issn>1943-0655</issn><eissn>1943-0655</eissn><eissn>1943-0647</eissn><coden>PJHOC3</coden><abstract>Optical-resolution photoacoustic microscopy (OR-PAM) is used for in vivo imaging of a variety of albino and pigmented eyes taking advantages of requiring no exogenous dye, performing high-resolution imaging, and achieving morphologic and functional imaging at the same time. However, to accurately diagnose the ophthalmic disease in the OR-PAM images, vascular enhancement algorithms are necessary for extracting vessels and quantifying them correctly. Vascular enhancement algorithms developed for other imaging technologies, are not suitable to be used for OR-PAM, because of the underlying differences in the physics of the formation of images. In this study, a new vascular enhancement algorithm called photoacoustic imaging vasculature enhancement filter (PAIVEF) is proposed, which not only enhances vasculature including micro-vessels signals, suppresses noise signals effectively, but also achieves highly sensitive and accurate enhancement of the vasculature within a large depth range in and out of the system's depth of focus (DOF). Using the PAIVEF, the morphologic and functional 3D images of the whole rat's ocular anterior vasculature segment was displayed simultaneously for a depth range of ~0.6 mm, which was ~7 times of the system's DOF. This study paves the way for the application of OR-PAM technology in ophthalmic disease research.</abstract><cop>Piscataway</cop><pub>IEEE</pub><doi>10.1109/JPHOT.2019.2948955</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0002-8221-3522</orcidid><orcidid>https://orcid.org/0000-0002-9995-7528</orcidid><orcidid>https://orcid.org/0000-0002-0352-3419</orcidid><orcidid>https://orcid.org/0000-0001-7565-2044</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1943-0655 |
ispartof | IEEE photonics journal, 2019-12, Vol.11 (6), p.1-12 |
issn | 1943-0655 1943-0655 1943-0647 |
language | eng |
recordid | cdi_crossref_primary_10_1109_JPHOT_2019_2948955 |
source | IEEE Open Access Journals; DOAJ Directory of Open Access Journals; EZB-FREE-00999 freely available EZB journals |
subjects | Algorithms Blood vessels Depth of field Diseases Eye (anatomy) Image enhancement Image resolution morphologic and functional imaging ocular vasculature Optical filters Optical imaging Photoacoustic imaging Photoacoustic microscopy Three-dimensional displays vascular enhancement filter |
title | Multiscale Vascular Enhancement Filter Applied to In Vivo Morphologic and Functional Photoacoustic Imaging of Rat Ocular Vasculature |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-07T06%3A12%3A32IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Multiscale%20Vascular%20Enhancement%20Filter%20Applied%20to%20In%20Vivo%20Morphologic%20and%20Functional%20Photoacoustic%20Imaging%20of%20Rat%20Ocular%20Vasculature&rft.jtitle=IEEE%20photonics%20journal&rft.au=Zhao,%20Huangxuan&rft.date=2019-12-01&rft.volume=11&rft.issue=6&rft.spage=1&rft.epage=12&rft.pages=1-12&rft.issn=1943-0655&rft.eissn=1943-0655&rft.coden=PJHOC3&rft_id=info:doi/10.1109/JPHOT.2019.2948955&rft_dat=%3Cproquest_cross%3E2322872181%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2322872181&rft_id=info:pmid/&rft_ieee_id=8879490&rft_doaj_id=oai_doaj_org_article_02ea3a0519e64cb48537f272dfb62be1&rfr_iscdi=true |