Deep Learning Applications in MRI-Based Detection of the Hippocampal Region for Alzheimer's Diagnosis
The hippocampal region is one of the most affected brain areas observed as a landmark in Magnetic Resonance Imaging (MRI) images for Alzheimer's disease (AD) diagnosis. The diminished alterations in the hippocampal and degeneration of cholinergic circuits have been conclusively correlated with...
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creator | Pusparani, Yori Lin, Chih-Yang Jan, Yih-Kuen Lin, Fu-Yu Liau, Ben-Yi Ardhianto, Peter Furqon, Elvin Nur Alex, John Sahaya Rani Aparajeeta, Jeetashree Lung, Chi-Wen |
description | The hippocampal region is one of the most affected brain areas observed as a landmark in Magnetic Resonance Imaging (MRI) images for Alzheimer's disease (AD) diagnosis. The diminished alterations in the hippocampal and degeneration of cholinergic circuits have been conclusively correlated with a decline in memory and cognitive function. However, the hippocampal region may not appear as clearly defined as other brain regions, making it difficult for neurologists and researchers to identify by visual inspection. The application of deep learning models to pinpoint the hippocampal region was initially valued. We assessed the ability of a deep learning model, You Only Live Once (YOLO), to detect hippocampal regions in three MRI image views and categories. The Alzheimer's Disease Neuroimaging Initiative-first (ADNI−1) dataset was used with 220 subjects in three categories using the three YOLO models. We obtained the YOLO performance for hippocampal region detection with accuracy in three views and categories. The average mean Average Precision (mAP) performance accuracy for YOLOv3 was 0.87, YOLOv4 was 0.85, and YOLOv5 was 0.96, respectively. The high accuracy of the detection of the hippocampal region was remarkable. We found that the sagittal view was higher than the axial and coronal views. Simultaneously, the Mild Cognitive Impairment (MCI) in the coronal view was lower among the three models. The results showed that YOLOv5 is a suitable model for detecting the hippocampal region in MRI images, and the sagittal view is the most reliable for detecting the hippocampal region in diagnosing AD. Our findings demonstrate the importance of detecting the hippocampal region to diagnose AD and accurately analyzing the hippocampal area within the region. The YOLOv5 model substantially affected performance metrics and interpretability across the three views and categories. |
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The diminished alterations in the hippocampal and degeneration of cholinergic circuits have been conclusively correlated with a decline in memory and cognitive function. However, the hippocampal region may not appear as clearly defined as other brain regions, making it difficult for neurologists and researchers to identify by visual inspection. The application of deep learning models to pinpoint the hippocampal region was initially valued. We assessed the ability of a deep learning model, You Only Live Once (YOLO), to detect hippocampal regions in three MRI image views and categories. The Alzheimer's Disease Neuroimaging Initiative-first (ADNI−1) dataset was used with 220 subjects in three categories using the three YOLO models. We obtained the YOLO performance for hippocampal region detection with accuracy in three views and categories. The average mean Average Precision (mAP) performance accuracy for YOLOv3 was 0.87, YOLOv4 was 0.85, and YOLOv5 was 0.96, respectively. The high accuracy of the detection of the hippocampal region was remarkable. We found that the sagittal view was higher than the axial and coronal views. Simultaneously, the Mild Cognitive Impairment (MCI) in the coronal view was lower among the three models. The results showed that YOLOv5 is a suitable model for detecting the hippocampal region in MRI images, and the sagittal view is the most reliable for detecting the hippocampal region in diagnosing AD. Our findings demonstrate the importance of detecting the hippocampal region to diagnose AD and accurately analyzing the hippocampal area within the region. The YOLOv5 model substantially affected performance metrics and interpretability across the three views and categories.</description><identifier>ISSN: 2169-3536</identifier><identifier>EISSN: 2169-3536</identifier><identifier>DOI: 10.1109/ACCESS.2024.3426085</identifier><identifier>CODEN: IAECCG</identifier><language>eng</language><publisher>IEEE</publisher><subject>Accuracy ; Alzheimer's disease ; Brain modeling ; Feature extraction ; hippocampal region ; Imaging ; Landmark ; Magnetic resonance imaging ; MRI image ; object detection ; YOLO</subject><ispartof>IEEE access, 2024, Vol.12, p.103830-103838</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c216t-64b9ad96d4c3bb256aa33b75264ba4d71d837b7e1507cce5eae7df3a3e0cfdae3</cites><orcidid>0000-0002-8894-748X ; 0000-0002-5140-2769 ; 0000-0003-0373-976X ; 0000-0002-7048-2493 ; 0000-0002-0401-8473 ; 0000-0001-7149-4034 ; 0000-0002-1492-7689</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/10613028$$EHTML$$P50$$Gieee$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,860,2096,4010,27610,27900,27901,27902,54908</link.rule.ids></links><search><creatorcontrib>Pusparani, Yori</creatorcontrib><creatorcontrib>Lin, Chih-Yang</creatorcontrib><creatorcontrib>Jan, Yih-Kuen</creatorcontrib><creatorcontrib>Lin, Fu-Yu</creatorcontrib><creatorcontrib>Liau, Ben-Yi</creatorcontrib><creatorcontrib>Ardhianto, Peter</creatorcontrib><creatorcontrib>Furqon, Elvin Nur</creatorcontrib><creatorcontrib>Alex, John Sahaya Rani</creatorcontrib><creatorcontrib>Aparajeeta, Jeetashree</creatorcontrib><creatorcontrib>Lung, Chi-Wen</creatorcontrib><title>Deep Learning Applications in MRI-Based Detection of the Hippocampal Region for Alzheimer's Diagnosis</title><title>IEEE access</title><addtitle>Access</addtitle><description>The hippocampal region is one of the most affected brain areas observed as a landmark in Magnetic Resonance Imaging (MRI) images for Alzheimer's disease (AD) diagnosis. The diminished alterations in the hippocampal and degeneration of cholinergic circuits have been conclusively correlated with a decline in memory and cognitive function. However, the hippocampal region may not appear as clearly defined as other brain regions, making it difficult for neurologists and researchers to identify by visual inspection. The application of deep learning models to pinpoint the hippocampal region was initially valued. We assessed the ability of a deep learning model, You Only Live Once (YOLO), to detect hippocampal regions in three MRI image views and categories. The Alzheimer's Disease Neuroimaging Initiative-first (ADNI−1) dataset was used with 220 subjects in three categories using the three YOLO models. We obtained the YOLO performance for hippocampal region detection with accuracy in three views and categories. The average mean Average Precision (mAP) performance accuracy for YOLOv3 was 0.87, YOLOv4 was 0.85, and YOLOv5 was 0.96, respectively. The high accuracy of the detection of the hippocampal region was remarkable. We found that the sagittal view was higher than the axial and coronal views. Simultaneously, the Mild Cognitive Impairment (MCI) in the coronal view was lower among the three models. The results showed that YOLOv5 is a suitable model for detecting the hippocampal region in MRI images, and the sagittal view is the most reliable for detecting the hippocampal region in diagnosing AD. Our findings demonstrate the importance of detecting the hippocampal region to diagnose AD and accurately analyzing the hippocampal area within the region. The YOLOv5 model substantially affected performance metrics and interpretability across the three views and categories.</description><subject>Accuracy</subject><subject>Alzheimer's disease</subject><subject>Brain modeling</subject><subject>Feature extraction</subject><subject>hippocampal region</subject><subject>Imaging</subject><subject>Landmark</subject><subject>Magnetic resonance imaging</subject><subject>MRI image</subject><subject>object detection</subject><subject>YOLO</subject><issn>2169-3536</issn><issn>2169-3536</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>ESBDL</sourceid><sourceid>RIE</sourceid><sourceid>DOA</sourceid><recordid>eNpNkEtPwzAQhCMEEhXwC-DgG6cUPxI7OZa2QKUiJB5na2OvW1dpHNm5wK8npQixl13NaD6tJsuuGZ0yRuu72Xy-fHubcsqLqSi4pFV5kk04k3UuSiFP_93n2VVKOzpONUqlmmS4QOzJGiF2vtuQWd-33sDgQ5eI78jz6yq_h4SWLHBAc9BJcGTYInnyfR8M7HtoyStuDo4Lkczary36PcbbRBYeNl1IPl1mZw7ahFe_-yL7eFi-z5_y9cvjaj5b52Z8cchl0dRga2kLI5qGlxJAiEaVfDSgsIrZSqhGISupMgZLBFTWCRBIjbOA4iJbHbk2wE730e8hfuoAXv8IIW40xMGbFjVvqqasZFVbXhTA69opVqCCmoKTlruRJY4sE0NKEd0fj1F9KF4fi9eH4vVv8WPq5pjyiPgvIZmgvBLfTbOAMw</recordid><startdate>2024</startdate><enddate>2024</enddate><creator>Pusparani, Yori</creator><creator>Lin, Chih-Yang</creator><creator>Jan, Yih-Kuen</creator><creator>Lin, Fu-Yu</creator><creator>Liau, Ben-Yi</creator><creator>Ardhianto, Peter</creator><creator>Furqon, Elvin Nur</creator><creator>Alex, John Sahaya Rani</creator><creator>Aparajeeta, Jeetashree</creator><creator>Lung, Chi-Wen</creator><general>IEEE</general><scope>97E</scope><scope>ESBDL</scope><scope>RIA</scope><scope>RIE</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-8894-748X</orcidid><orcidid>https://orcid.org/0000-0002-5140-2769</orcidid><orcidid>https://orcid.org/0000-0003-0373-976X</orcidid><orcidid>https://orcid.org/0000-0002-7048-2493</orcidid><orcidid>https://orcid.org/0000-0002-0401-8473</orcidid><orcidid>https://orcid.org/0000-0001-7149-4034</orcidid><orcidid>https://orcid.org/0000-0002-1492-7689</orcidid></search><sort><creationdate>2024</creationdate><title>Deep Learning Applications in MRI-Based Detection of the Hippocampal Region for Alzheimer's Diagnosis</title><author>Pusparani, Yori ; Lin, Chih-Yang ; Jan, Yih-Kuen ; Lin, Fu-Yu ; Liau, Ben-Yi ; Ardhianto, Peter ; Furqon, Elvin Nur ; Alex, John Sahaya Rani ; Aparajeeta, Jeetashree ; Lung, Chi-Wen</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c216t-64b9ad96d4c3bb256aa33b75264ba4d71d837b7e1507cce5eae7df3a3e0cfdae3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Accuracy</topic><topic>Alzheimer's disease</topic><topic>Brain modeling</topic><topic>Feature extraction</topic><topic>hippocampal region</topic><topic>Imaging</topic><topic>Landmark</topic><topic>Magnetic resonance imaging</topic><topic>MRI image</topic><topic>object detection</topic><topic>YOLO</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pusparani, Yori</creatorcontrib><creatorcontrib>Lin, Chih-Yang</creatorcontrib><creatorcontrib>Jan, Yih-Kuen</creatorcontrib><creatorcontrib>Lin, Fu-Yu</creatorcontrib><creatorcontrib>Liau, Ben-Yi</creatorcontrib><creatorcontrib>Ardhianto, Peter</creatorcontrib><creatorcontrib>Furqon, Elvin Nur</creatorcontrib><creatorcontrib>Alex, John Sahaya Rani</creatorcontrib><creatorcontrib>Aparajeeta, Jeetashree</creatorcontrib><creatorcontrib>Lung, Chi-Wen</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE Open Access Journals</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Electronic Library (IEL)</collection><collection>CrossRef</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>IEEE access</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pusparani, Yori</au><au>Lin, Chih-Yang</au><au>Jan, Yih-Kuen</au><au>Lin, Fu-Yu</au><au>Liau, Ben-Yi</au><au>Ardhianto, Peter</au><au>Furqon, Elvin Nur</au><au>Alex, John Sahaya Rani</au><au>Aparajeeta, Jeetashree</au><au>Lung, Chi-Wen</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Deep Learning Applications in MRI-Based Detection of the Hippocampal Region for Alzheimer's Diagnosis</atitle><jtitle>IEEE access</jtitle><stitle>Access</stitle><date>2024</date><risdate>2024</risdate><volume>12</volume><spage>103830</spage><epage>103838</epage><pages>103830-103838</pages><issn>2169-3536</issn><eissn>2169-3536</eissn><coden>IAECCG</coden><abstract>The hippocampal region is one of the most affected brain areas observed as a landmark in Magnetic Resonance Imaging (MRI) images for Alzheimer's disease (AD) diagnosis. The diminished alterations in the hippocampal and degeneration of cholinergic circuits have been conclusively correlated with a decline in memory and cognitive function. However, the hippocampal region may not appear as clearly defined as other brain regions, making it difficult for neurologists and researchers to identify by visual inspection. The application of deep learning models to pinpoint the hippocampal region was initially valued. We assessed the ability of a deep learning model, You Only Live Once (YOLO), to detect hippocampal regions in three MRI image views and categories. The Alzheimer's Disease Neuroimaging Initiative-first (ADNI−1) dataset was used with 220 subjects in three categories using the three YOLO models. We obtained the YOLO performance for hippocampal region detection with accuracy in three views and categories. The average mean Average Precision (mAP) performance accuracy for YOLOv3 was 0.87, YOLOv4 was 0.85, and YOLOv5 was 0.96, respectively. The high accuracy of the detection of the hippocampal region was remarkable. We found that the sagittal view was higher than the axial and coronal views. Simultaneously, the Mild Cognitive Impairment (MCI) in the coronal view was lower among the three models. The results showed that YOLOv5 is a suitable model for detecting the hippocampal region in MRI images, and the sagittal view is the most reliable for detecting the hippocampal region in diagnosing AD. Our findings demonstrate the importance of detecting the hippocampal region to diagnose AD and accurately analyzing the hippocampal area within the region. 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subjects | Accuracy Alzheimer's disease Brain modeling Feature extraction hippocampal region Imaging Landmark Magnetic resonance imaging MRI image object detection YOLO |
title | Deep Learning Applications in MRI-Based Detection of the Hippocampal Region for Alzheimer's Diagnosis |
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