Solution of the structure of tetrameric human glucose 6-phosphate dehydrogenase by molecular replacement
Recombinant human glucose 6‐phosphate dehydrogenase (G6PD) has been crystallized and its structure solved by molecular replacement. Crystals of the natural mutant R459L grow under similar conditions in space groups P212121 and C2221 with eight or four 515‐residue molecules in the asymmetric unit, re...
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Veröffentlicht in: | Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 1999-04, Vol.55 (4), p.826-834 |
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container_title | Acta crystallographica. Section D, Biological crystallography. |
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creator | Au, Shannon W. N. Naylor, Claire E. Gover, Sheila Vandeputte-Rutten, Lucy Scopes, Deborah A. Mason, Philip J. Luzzatto, Lucio Lam, Veronica M. S. Adams, Margaret J. |
description | Recombinant human glucose 6‐phosphate dehydrogenase (G6PD) has been crystallized and its structure solved by molecular replacement. Crystals of the natural mutant R459L grow under similar conditions in space groups P212121 and C2221 with eight or four 515‐residue molecules in the asymmetric unit, respectively. A non‐crystallographic 222 tetramer was found in the C2221 crystal form using a 4 Å resolution data set and a dimer of the large β + α domains of the Leuconostoc mesenteroides enzyme as a search model. This tetramer was the only successful search model for the P212121 crystal form using data to 3 Å. Crystals of the deletion mutant ΔG6PD grow in space group F222 with a monomer in the asymmetric unit; 2.5 Å resolution data have been collected. Comparison of the packing of tetramers in the three space groups suggests that the N‐terminal tail of the enzyme prevents crystallization with exact 222 molecular symmetry. |
doi_str_mv | 10.1107/S0907444999000827 |
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N. ; Naylor, Claire E. ; Gover, Sheila ; Vandeputte-Rutten, Lucy ; Scopes, Deborah A. ; Mason, Philip J. ; Luzzatto, Lucio ; Lam, Veronica M. S. ; Adams, Margaret J.</creator><creatorcontrib>Au, Shannon W. N. ; Naylor, Claire E. ; Gover, Sheila ; Vandeputte-Rutten, Lucy ; Scopes, Deborah A. ; Mason, Philip J. ; Luzzatto, Lucio ; Lam, Veronica M. S. ; Adams, Margaret J.</creatorcontrib><description>Recombinant human glucose 6‐phosphate dehydrogenase (G6PD) has been crystallized and its structure solved by molecular replacement. Crystals of the natural mutant R459L grow under similar conditions in space groups P212121 and C2221 with eight or four 515‐residue molecules in the asymmetric unit, respectively. A non‐crystallographic 222 tetramer was found in the C2221 crystal form using a 4 Å resolution data set and a dimer of the large β + α domains of the Leuconostoc mesenteroides enzyme as a search model. This tetramer was the only successful search model for the P212121 crystal form using data to 3 Å. Crystals of the deletion mutant ΔG6PD grow in space group F222 with a monomer in the asymmetric unit; 2.5 Å resolution data have been collected. Comparison of the packing of tetramers in the three space groups suggests that the N‐terminal tail of the enzyme prevents crystallization with exact 222 molecular symmetry.</description><identifier>ISSN: 1399-0047</identifier><identifier>ISSN: 0907-4449</identifier><identifier>EISSN: 1399-0047</identifier><identifier>DOI: 10.1107/S0907444999000827</identifier><identifier>PMID: 10089300</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>Amino Acid Sequence ; Base Sequence ; Crystallization ; Crystallography, X-Ray ; Dimerization ; glucose 6-phosphate dehydrogenase ; Glucosephosphate Dehydrogenase - chemistry ; Glucosephosphate Dehydrogenase - genetics ; Humans ; Leuconostoc - enzymology ; molecular replacement ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; oxidoreductases ; Protein Conformation</subject><ispartof>Acta crystallographica. 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N.</creatorcontrib><creatorcontrib>Naylor, Claire E.</creatorcontrib><creatorcontrib>Gover, Sheila</creatorcontrib><creatorcontrib>Vandeputte-Rutten, Lucy</creatorcontrib><creatorcontrib>Scopes, Deborah A.</creatorcontrib><creatorcontrib>Mason, Philip J.</creatorcontrib><creatorcontrib>Luzzatto, Lucio</creatorcontrib><creatorcontrib>Lam, Veronica M. S.</creatorcontrib><creatorcontrib>Adams, Margaret J.</creatorcontrib><title>Solution of the structure of tetrameric human glucose 6-phosphate dehydrogenase by molecular replacement</title><title>Acta crystallographica. Section D, Biological crystallography.</title><addtitle>Acta Cryst. D</addtitle><description>Recombinant human glucose 6‐phosphate dehydrogenase (G6PD) has been crystallized and its structure solved by molecular replacement. Crystals of the natural mutant R459L grow under similar conditions in space groups P212121 and C2221 with eight or four 515‐residue molecules in the asymmetric unit, respectively. A non‐crystallographic 222 tetramer was found in the C2221 crystal form using a 4 Å resolution data set and a dimer of the large β + α domains of the Leuconostoc mesenteroides enzyme as a search model. This tetramer was the only successful search model for the P212121 crystal form using data to 3 Å. Crystals of the deletion mutant ΔG6PD grow in space group F222 with a monomer in the asymmetric unit; 2.5 Å resolution data have been collected. Comparison of the packing of tetramers in the three space groups suggests that the N‐terminal tail of the enzyme prevents crystallization with exact 222 molecular symmetry.</description><subject>Amino Acid Sequence</subject><subject>Base Sequence</subject><subject>Crystallization</subject><subject>Crystallography, X-Ray</subject><subject>Dimerization</subject><subject>glucose 6-phosphate dehydrogenase</subject><subject>Glucosephosphate Dehydrogenase - chemistry</subject><subject>Glucosephosphate Dehydrogenase - genetics</subject><subject>Humans</subject><subject>Leuconostoc - enzymology</subject><subject>molecular replacement</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed</subject><subject>oxidoreductases</subject><subject>Protein Conformation</subject><issn>1399-0047</issn><issn>0907-4449</issn><issn>1399-0047</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE1OwzAQhS0EoqVwADbIFwjYcWLXy6pAQar4rVSxshx33ASSJrITQW-PIQhVYsFqRjPve5p5CJ1Sck4pERfPRBKRJImUkhAyjsUeGlImZURIIvZ3-gE68v41aOKYiUM0oEEtGSFDlD_XZdcW9QbXFrc5YN-6zrSdg-8BtE5X4AqD867SG7wuO1N7wDxq8to3uW4BryDfrly9ho0Om2yLq7oE05XaYQdNqQ1UsGmP0YHVpYeTnzpCi-urxfQmmt_PbqeTeWTCI3EUy5QZliY8nMep5VkibZwKTfkKMmuAWc4NWJFRYWVKqRE6M1xyEHxsEs1GiPa2xtXeO7CqcUWl3VZRor5CU39CC8xZzzRdVsFqh-hTCoJxL3gvStj-76gmL5ezpwDHAY16tPAtfPyi2r0pLphI1fJupqb04eZxvFwqyj4BK7SIgg</recordid><startdate>19990401</startdate><enddate>19990401</enddate><creator>Au, Shannon W. 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S. ; Adams, Margaret J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4442-2953c354693061f6b49f257a16debfce3f66cef7b17f9511c7abc696e768c4a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Amino Acid Sequence</topic><topic>Base Sequence</topic><topic>Crystallization</topic><topic>Crystallography, X-Ray</topic><topic>Dimerization</topic><topic>glucose 6-phosphate dehydrogenase</topic><topic>Glucosephosphate Dehydrogenase - chemistry</topic><topic>Glucosephosphate Dehydrogenase - genetics</topic><topic>Humans</topic><topic>Leuconostoc - enzymology</topic><topic>molecular replacement</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed</topic><topic>oxidoreductases</topic><topic>Protein Conformation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Au, Shannon W. N.</creatorcontrib><creatorcontrib>Naylor, Claire E.</creatorcontrib><creatorcontrib>Gover, Sheila</creatorcontrib><creatorcontrib>Vandeputte-Rutten, Lucy</creatorcontrib><creatorcontrib>Scopes, Deborah A.</creatorcontrib><creatorcontrib>Mason, Philip J.</creatorcontrib><creatorcontrib>Luzzatto, Lucio</creatorcontrib><creatorcontrib>Lam, Veronica M. S.</creatorcontrib><creatorcontrib>Adams, Margaret J.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Au, Shannon W. N.</au><au>Naylor, Claire E.</au><au>Gover, Sheila</au><au>Vandeputte-Rutten, Lucy</au><au>Scopes, Deborah A.</au><au>Mason, Philip J.</au><au>Luzzatto, Lucio</au><au>Lam, Veronica M. S.</au><au>Adams, Margaret J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Solution of the structure of tetrameric human glucose 6-phosphate dehydrogenase by molecular replacement</atitle><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle><addtitle>Acta Cryst. D</addtitle><date>1999-04-01</date><risdate>1999</risdate><volume>55</volume><issue>4</issue><spage>826</spage><epage>834</epage><pages>826-834</pages><issn>1399-0047</issn><issn>0907-4449</issn><eissn>1399-0047</eissn><abstract>Recombinant human glucose 6‐phosphate dehydrogenase (G6PD) has been crystallized and its structure solved by molecular replacement. Crystals of the natural mutant R459L grow under similar conditions in space groups P212121 and C2221 with eight or four 515‐residue molecules in the asymmetric unit, respectively. A non‐crystallographic 222 tetramer was found in the C2221 crystal form using a 4 Å resolution data set and a dimer of the large β + α domains of the Leuconostoc mesenteroides enzyme as a search model. This tetramer was the only successful search model for the P212121 crystal form using data to 3 Å. Crystals of the deletion mutant ΔG6PD grow in space group F222 with a monomer in the asymmetric unit; 2.5 Å resolution data have been collected. Comparison of the packing of tetramers in the three space groups suggests that the N‐terminal tail of the enzyme prevents crystallization with exact 222 molecular symmetry.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>10089300</pmid><doi>10.1107/S0907444999000827</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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source | MEDLINE; Crystallography Journals Online; Wiley Online Library Journals Frontfile Complete; Alma/SFX Local Collection |
subjects | Amino Acid Sequence Base Sequence Crystallization Crystallography, X-Ray Dimerization glucose 6-phosphate dehydrogenase Glucosephosphate Dehydrogenase - chemistry Glucosephosphate Dehydrogenase - genetics Humans Leuconostoc - enzymology molecular replacement Molecular Sequence Data Mutagenesis, Site-Directed oxidoreductases Protein Conformation |
title | Solution of the structure of tetrameric human glucose 6-phosphate dehydrogenase by molecular replacement |
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