Databases for Protein-Ligand Complexes
Recent advances in experimental techniques have led to an enormous explosion of available data about protein–ligand complexes. To exploit the information that is hidden in these large data, collection tools for managing and accessing huge data collections are needed. This paper discusses databases f...
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Veröffentlicht in: | Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 1998-11, Vol.54 (6-1), p.1178-1182 |
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container_title | Acta crystallographica. Section D, Biological crystallography. |
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creator | Hendlich, Manfred |
description | Recent advances in experimental techniques have led to an enormous explosion of available data about protein–ligand complexes. To exploit the information that is hidden in these large data, collection tools for managing and accessing huge data collections are needed. This paper discusses databases for protein–ligand data which are accessible via the World Wide Web. A strong focus is placed on the ReLiBase database system which is a new three‐dimensional database for storing and analysing structures of protein–ligand complexes currently deposited in the Brookhaven Protein Data Bank (PDB). ReLiBase contains efficient query tools for identifying and analysing ligands and protein–ligand complexes. Its application for structure‐based drug design is illustrated. |
doi_str_mv | 10.1107/S0907444998007124 |
format | Article |
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Section D, Biological crystallography.</title><addtitle>Acta Cryst. D</addtitle><description>Recent advances in experimental techniques have led to an enormous explosion of available data about protein–ligand complexes. To exploit the information that is hidden in these large data, collection tools for managing and accessing huge data collections are needed. This paper discusses databases for protein–ligand data which are accessible via the World Wide Web. A strong focus is placed on the ReLiBase database system which is a new three‐dimensional database for storing and analysing structures of protein–ligand complexes currently deposited in the Brookhaven Protein Data Bank (PDB). ReLiBase contains efficient query tools for identifying and analysing ligands and protein–ligand complexes. Its application for structure‐based drug design is illustrated.</description><subject>Databases, Factual</subject><subject>Ligands</subject><subject>Protein Binding</subject><subject>Proteins - metabolism</subject><issn>1399-0047</issn><issn>0907-4449</issn><issn>1399-0047</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkMFKAzEURYMotlY_wI105W70JXlJJsva0SoUFayoq5CZZGS07QxJxfbvHRmRggtX7y7uuXAeIccUzigFdf4AGhQiap0CKMpwh_Qp1zoBQLW7lXvkIMY3AGCMq33SowCpRo19cprZlc1t9HFY1mF4H-qVr5bJtHq1Szcc14tm7tc-HpK90s6jP_q5A_J4dTkbXyfTu8nNeDRNCq6lTAQ6K0WJDrnClIHkHLVgUiBFxkRRCmWF5YV2TnqaM-fQY6FEnmupSwZ8QGi3W4Q6xuBL04RqYcPGUDDfzuaPc8ucdEzzkS-82yI6ybaQdoXPau43_y-a0Ut2MWq_JVs06dAqrvz6F7Xh3UjFlTBPtxOjZix71hmYGf8CmXhuBQ</recordid><startdate>19981101</startdate><enddate>19981101</enddate><creator>Hendlich, Manfred</creator><general>International Union of Crystallography</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>19981101</creationdate><title>Databases for Protein-Ligand Complexes</title><author>Hendlich, Manfred</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3966-54da65f4d4374820633495265414225cf57a5a3c9dd6e1b2dd4e4c75bb969f203</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Databases, Factual</topic><topic>Ligands</topic><topic>Protein Binding</topic><topic>Proteins - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hendlich, Manfred</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><jtitle>Acta crystallographica. 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This paper discusses databases for protein–ligand data which are accessible via the World Wide Web. A strong focus is placed on the ReLiBase database system which is a new three‐dimensional database for storing and analysing structures of protein–ligand complexes currently deposited in the Brookhaven Protein Data Bank (PDB). ReLiBase contains efficient query tools for identifying and analysing ligands and protein–ligand complexes. Its application for structure‐based drug design is illustrated.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>10089494</pmid><doi>10.1107/S0907444998007124</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Databases, Factual Ligands Protein Binding Proteins - metabolism |
title | Databases for Protein-Ligand Complexes |
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