Image-based, unsupervised estimation of fish size from commercial landings using deep learning

Abstract The dynamics of fish length distribution is a key input for understanding the fish population dynamics and taking informed management decisions on exploited stocks. Nevertheless, in most fisheries, the length of landed fish is still made by hand. As a result, length estimation is precise at...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:ICES journal of marine science 2020-07, Vol.77 (4), p.1330-1339
Hauptverfasser: Álvarez-Ellacuría, Amaya, Palmer, Miquel, Catalán, Ignacio A, Lisani, Jose-Luis
Format: Artikel
Sprache:eng
Online-Zugang:Volltext bestellen
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1339
container_issue 4
container_start_page 1330
container_title ICES journal of marine science
container_volume 77
creator Álvarez-Ellacuría, Amaya
Palmer, Miquel
Catalán, Ignacio A
Lisani, Jose-Luis
description Abstract The dynamics of fish length distribution is a key input for understanding the fish population dynamics and taking informed management decisions on exploited stocks. Nevertheless, in most fisheries, the length of landed fish is still made by hand. As a result, length estimation is precise at fish level, but due to the inherent high costs of manual sampling, the sample size tends to be small. Accordingly, the precision of population-level estimates is often suboptimal and prone to bias when properly stratified sampling programmes are not affordable. Recent applications of artificial intelligence to fisheries science are opening a promising opportunity for the massive sampling of fish catches. Here, we present the results obtained using a deep convolutional network (Mask R-CNN) for unsupervised (i.e. fully automatic) European hake length estimation from images of fish boxes automatically collected at the auction centre. The estimated mean of fish lengths at the box level is accurate; for average lengths ranging 20–40 cm, the root-mean-square deviation was 1.9 cm, and maximum deviation between the estimated and the measured mean body length was 4.0 cm. We discuss the challenges and opportunities that arise with the use of this technology to improve data acquisition in fisheries.
doi_str_mv 10.1093/icesjms/fsz216
format Article
fullrecord <record><control><sourceid>oup_TOX</sourceid><recordid>TN_cdi_crossref_primary_10_1093_icesjms_fsz216</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><oup_id>10.1093/icesjms/fsz216</oup_id><sourcerecordid>10.1093/icesjms/fsz216</sourcerecordid><originalsourceid>FETCH-LOGICAL-c379t-de8a9bc2ec453a47cba381f4263e18ce21121c6be766287207c796ae742dbf153</originalsourceid><addsrcrecordid>eNqFkM1LxDAQxYMouK5ePecq2N18tEl7lMWPhQUverWk6WTN0jYl0wruX2-le_Dm6c0b5g2PHyG3nK04K-TaW8BDi2uHR8HVGVlM2ywpRF6c_5kvyRXigTGmU8UW5GPbmj0klUGo7-nY4dhD_PKTo4CDb83gQ0eDo87jJ0V_BOpiaKkNbQvRetPQxnS17_ZIR5yE1gA9bcDEbnLX5MKZBuHmpEvy_vT4tnlJdq_P283DLrFSF0NSQ26KygqwaSZNqm1lZM5dKpQEnlsQnAtuVQVaKZFrwbTVhTKgU1FXjmdySVbzXxsDYgRX9nEqH79LzspfOuWJTjnTmQJ3cyCM_X-3P2Ova00</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Image-based, unsupervised estimation of fish size from commercial landings using deep learning</title><source>Oxford Journals Open Access Collection</source><creator>Álvarez-Ellacuría, Amaya ; Palmer, Miquel ; Catalán, Ignacio A ; Lisani, Jose-Luis</creator><creatorcontrib>Álvarez-Ellacuría, Amaya ; Palmer, Miquel ; Catalán, Ignacio A ; Lisani, Jose-Luis</creatorcontrib><description>Abstract The dynamics of fish length distribution is a key input for understanding the fish population dynamics and taking informed management decisions on exploited stocks. Nevertheless, in most fisheries, the length of landed fish is still made by hand. As a result, length estimation is precise at fish level, but due to the inherent high costs of manual sampling, the sample size tends to be small. Accordingly, the precision of population-level estimates is often suboptimal and prone to bias when properly stratified sampling programmes are not affordable. Recent applications of artificial intelligence to fisheries science are opening a promising opportunity for the massive sampling of fish catches. Here, we present the results obtained using a deep convolutional network (Mask R-CNN) for unsupervised (i.e. fully automatic) European hake length estimation from images of fish boxes automatically collected at the auction centre. The estimated mean of fish lengths at the box level is accurate; for average lengths ranging 20–40 cm, the root-mean-square deviation was 1.9 cm, and maximum deviation between the estimated and the measured mean body length was 4.0 cm. We discuss the challenges and opportunities that arise with the use of this technology to improve data acquisition in fisheries.</description><identifier>ISSN: 1095-9289</identifier><identifier>EISSN: 1095-9289</identifier><identifier>DOI: 10.1093/icesjms/fsz216</identifier><language>eng</language><publisher>Oxford University Press</publisher><ispartof>ICES journal of marine science, 2020-07, Vol.77 (4), p.1330-1339</ispartof><rights>International Council for the Exploration of the Sea 2019. All rights reserved. For permissions, please email: journals.permissions@oup.com 2019</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c379t-de8a9bc2ec453a47cba381f4263e18ce21121c6be766287207c796ae742dbf153</citedby><cites>FETCH-LOGICAL-c379t-de8a9bc2ec453a47cba381f4263e18ce21121c6be766287207c796ae742dbf153</cites><orcidid>0000-0002-7004-2252</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,1598,27901,27902</link.rule.ids><linktorsrc>$$Uhttps://dx.doi.org/10.1093/icesjms/fsz216$$EView_record_in_Oxford_University_Press$$FView_record_in_$$GOxford_University_Press</linktorsrc></links><search><creatorcontrib>Álvarez-Ellacuría, Amaya</creatorcontrib><creatorcontrib>Palmer, Miquel</creatorcontrib><creatorcontrib>Catalán, Ignacio A</creatorcontrib><creatorcontrib>Lisani, Jose-Luis</creatorcontrib><title>Image-based, unsupervised estimation of fish size from commercial landings using deep learning</title><title>ICES journal of marine science</title><description>Abstract The dynamics of fish length distribution is a key input for understanding the fish population dynamics and taking informed management decisions on exploited stocks. Nevertheless, in most fisheries, the length of landed fish is still made by hand. As a result, length estimation is precise at fish level, but due to the inherent high costs of manual sampling, the sample size tends to be small. Accordingly, the precision of population-level estimates is often suboptimal and prone to bias when properly stratified sampling programmes are not affordable. Recent applications of artificial intelligence to fisheries science are opening a promising opportunity for the massive sampling of fish catches. Here, we present the results obtained using a deep convolutional network (Mask R-CNN) for unsupervised (i.e. fully automatic) European hake length estimation from images of fish boxes automatically collected at the auction centre. The estimated mean of fish lengths at the box level is accurate; for average lengths ranging 20–40 cm, the root-mean-square deviation was 1.9 cm, and maximum deviation between the estimated and the measured mean body length was 4.0 cm. We discuss the challenges and opportunities that arise with the use of this technology to improve data acquisition in fisheries.</description><issn>1095-9289</issn><issn>1095-9289</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNqFkM1LxDAQxYMouK5ePecq2N18tEl7lMWPhQUverWk6WTN0jYl0wruX2-le_Dm6c0b5g2PHyG3nK04K-TaW8BDi2uHR8HVGVlM2ywpRF6c_5kvyRXigTGmU8UW5GPbmj0klUGo7-nY4dhD_PKTo4CDb83gQ0eDo87jJ0V_BOpiaKkNbQvRetPQxnS17_ZIR5yE1gA9bcDEbnLX5MKZBuHmpEvy_vT4tnlJdq_P283DLrFSF0NSQ26KygqwaSZNqm1lZM5dKpQEnlsQnAtuVQVaKZFrwbTVhTKgU1FXjmdySVbzXxsDYgRX9nEqH79LzspfOuWJTjnTmQJ3cyCM_X-3P2Ova00</recordid><startdate>20200701</startdate><enddate>20200701</enddate><creator>Álvarez-Ellacuría, Amaya</creator><creator>Palmer, Miquel</creator><creator>Catalán, Ignacio A</creator><creator>Lisani, Jose-Luis</creator><general>Oxford University Press</general><scope>AAYXX</scope><scope>CITATION</scope><orcidid>https://orcid.org/0000-0002-7004-2252</orcidid></search><sort><creationdate>20200701</creationdate><title>Image-based, unsupervised estimation of fish size from commercial landings using deep learning</title><author>Álvarez-Ellacuría, Amaya ; Palmer, Miquel ; Catalán, Ignacio A ; Lisani, Jose-Luis</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c379t-de8a9bc2ec453a47cba381f4263e18ce21121c6be766287207c796ae742dbf153</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Álvarez-Ellacuría, Amaya</creatorcontrib><creatorcontrib>Palmer, Miquel</creatorcontrib><creatorcontrib>Catalán, Ignacio A</creatorcontrib><creatorcontrib>Lisani, Jose-Luis</creatorcontrib><collection>CrossRef</collection><jtitle>ICES journal of marine science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Álvarez-Ellacuría, Amaya</au><au>Palmer, Miquel</au><au>Catalán, Ignacio A</au><au>Lisani, Jose-Luis</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Image-based, unsupervised estimation of fish size from commercial landings using deep learning</atitle><jtitle>ICES journal of marine science</jtitle><date>2020-07-01</date><risdate>2020</risdate><volume>77</volume><issue>4</issue><spage>1330</spage><epage>1339</epage><pages>1330-1339</pages><issn>1095-9289</issn><eissn>1095-9289</eissn><abstract>Abstract The dynamics of fish length distribution is a key input for understanding the fish population dynamics and taking informed management decisions on exploited stocks. Nevertheless, in most fisheries, the length of landed fish is still made by hand. As a result, length estimation is precise at fish level, but due to the inherent high costs of manual sampling, the sample size tends to be small. Accordingly, the precision of population-level estimates is often suboptimal and prone to bias when properly stratified sampling programmes are not affordable. Recent applications of artificial intelligence to fisheries science are opening a promising opportunity for the massive sampling of fish catches. Here, we present the results obtained using a deep convolutional network (Mask R-CNN) for unsupervised (i.e. fully automatic) European hake length estimation from images of fish boxes automatically collected at the auction centre. The estimated mean of fish lengths at the box level is accurate; for average lengths ranging 20–40 cm, the root-mean-square deviation was 1.9 cm, and maximum deviation between the estimated and the measured mean body length was 4.0 cm. We discuss the challenges and opportunities that arise with the use of this technology to improve data acquisition in fisheries.</abstract><pub>Oxford University Press</pub><doi>10.1093/icesjms/fsz216</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-7004-2252</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext_linktorsrc
identifier ISSN: 1095-9289
ispartof ICES journal of marine science, 2020-07, Vol.77 (4), p.1330-1339
issn 1095-9289
1095-9289
language eng
recordid cdi_crossref_primary_10_1093_icesjms_fsz216
source Oxford Journals Open Access Collection
title Image-based, unsupervised estimation of fish size from commercial landings using deep learning
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-08T03%3A40%3A33IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-oup_TOX&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Image-based,%20unsupervised%20estimation%20of%20fish%20size%20from%20commercial%20landings%20using%20deep%20learning&rft.jtitle=ICES%20journal%20of%20marine%20science&rft.au=%C3%81lvarez-Ellacur%C3%ADa,%20Amaya&rft.date=2020-07-01&rft.volume=77&rft.issue=4&rft.spage=1330&rft.epage=1339&rft.pages=1330-1339&rft.issn=1095-9289&rft.eissn=1095-9289&rft_id=info:doi/10.1093/icesjms/fsz216&rft_dat=%3Coup_TOX%3E10.1093/icesjms/fsz216%3C/oup_TOX%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rft_oup_id=10.1093/icesjms/fsz216&rfr_iscdi=true