Optimization of the reconstruction parameters in [123I]FP-CIT SPECT

The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was us...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Physics in medicine & biology 2018-04, Vol.63 (8), p.085009-085009
Hauptverfasser: Niñerola-Baizán, Aida, Gallego, Judith, Cot, Albert, Aguiar, Pablo, Lomeña, Francisco, Pavía, Javier, Ros, Domènec
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 085009
container_issue 8
container_start_page 085009
container_title Physics in medicine & biology
container_volume 63
creator Niñerola-Baizán, Aida
Gallego, Judith
Cot, Albert
Aguiar, Pablo
Lomeña, Francisco
Pavía, Javier
Ros, Domènec
description The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.
doi_str_mv 10.1088/1361-6560/aab799
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1088_1361_6560_aab799</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2015409956</sourcerecordid><originalsourceid>FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</originalsourceid><addsrcrecordid>eNp1kE1Lw0AQhhdRbK3ePUmOHoyd_Wz2KKHVgtCC9SSybDYbTGmycTc56K83NbU3LzMwPO8L8yB0jeEeQ5JMMRU4FlzAVOtsJuUJGh9Pp2gMQHEsMecjdBHCFgDjhLBzNCKScwosGaN01bRlVX7rtnR15Iqo_bCRt8bVofWd-b022uvKttaHqKyjN0zo8n2xjtPlJnpZz9PNJTor9C7Yq8OeoNfFfJM-xc-rx2X68BwbxljbT0KEzgsxM4YyQfRM2pkkXGQFT4CJPNcm18wyQYFSaYUByAQuCJeQgU7oBN0OvY13n50NrarKYOxup2vruqAIYM5ASi56FAbUeBeCt4VqfFlp_6UwqL06tfek9p7UoK6P3Bzau6yy-THw56oH7gagdI3aus7X_bP_9_0AjSJ1cg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2015409956</pqid></control><display><type>article</type><title>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</title><source>IOP Publishing Journals</source><source>Institute of Physics (IOP) Journals - HEAL-Link</source><creator>Niñerola-Baizán, Aida ; Gallego, Judith ; Cot, Albert ; Aguiar, Pablo ; Lomeña, Francisco ; Pavía, Javier ; Ros, Domènec</creator><creatorcontrib>Niñerola-Baizán, Aida ; Gallego, Judith ; Cot, Albert ; Aguiar, Pablo ; Lomeña, Francisco ; Pavía, Javier ; Ros, Domènec</creatorcontrib><description>The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.</description><identifier>ISSN: 0031-9155</identifier><identifier>ISSN: 1361-6560</identifier><identifier>EISSN: 1361-6560</identifier><identifier>DOI: 10.1088/1361-6560/aab799</identifier><identifier>PMID: 29553048</identifier><identifier>CODEN: PHMBA7</identifier><language>eng</language><publisher>England: IOP Publishing</publisher><subject>Monte Carlo simulation ; nuclear imaging ; parkinson's disease ; reconstruction parameters optimization ; single photon computed emission tomography quantification</subject><ispartof>Physics in medicine &amp; biology, 2018-04, Vol.63 (8), p.085009-085009</ispartof><rights>2018 Institute of Physics and Engineering in Medicine</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</citedby><cites>FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://iopscience.iop.org/article/10.1088/1361-6560/aab799/pdf$$EPDF$$P50$$Giop$$Hfree_for_read</linktopdf><link.rule.ids>314,776,780,27903,27904,53824,53871</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29553048$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Niñerola-Baizán, Aida</creatorcontrib><creatorcontrib>Gallego, Judith</creatorcontrib><creatorcontrib>Cot, Albert</creatorcontrib><creatorcontrib>Aguiar, Pablo</creatorcontrib><creatorcontrib>Lomeña, Francisco</creatorcontrib><creatorcontrib>Pavía, Javier</creatorcontrib><creatorcontrib>Ros, Domènec</creatorcontrib><title>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</title><title>Physics in medicine &amp; biology</title><addtitle>PMB</addtitle><addtitle>Phys. Med. Biol</addtitle><description>The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.</description><subject>Monte Carlo simulation</subject><subject>nuclear imaging</subject><subject>parkinson's disease</subject><subject>reconstruction parameters optimization</subject><subject>single photon computed emission tomography quantification</subject><issn>0031-9155</issn><issn>1361-6560</issn><issn>1361-6560</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>O3W</sourceid><recordid>eNp1kE1Lw0AQhhdRbK3ePUmOHoyd_Wz2KKHVgtCC9SSybDYbTGmycTc56K83NbU3LzMwPO8L8yB0jeEeQ5JMMRU4FlzAVOtsJuUJGh9Pp2gMQHEsMecjdBHCFgDjhLBzNCKScwosGaN01bRlVX7rtnR15Iqo_bCRt8bVofWd-b022uvKttaHqKyjN0zo8n2xjtPlJnpZz9PNJTor9C7Yq8OeoNfFfJM-xc-rx2X68BwbxljbT0KEzgsxM4YyQfRM2pkkXGQFT4CJPNcm18wyQYFSaYUByAQuCJeQgU7oBN0OvY13n50NrarKYOxup2vruqAIYM5ASi56FAbUeBeCt4VqfFlp_6UwqL06tfek9p7UoK6P3Bzau6yy-THw56oH7gagdI3aus7X_bP_9_0AjSJ1cg</recordid><startdate>20180413</startdate><enddate>20180413</enddate><creator>Niñerola-Baizán, Aida</creator><creator>Gallego, Judith</creator><creator>Cot, Albert</creator><creator>Aguiar, Pablo</creator><creator>Lomeña, Francisco</creator><creator>Pavía, Javier</creator><creator>Ros, Domènec</creator><general>IOP Publishing</general><scope>O3W</scope><scope>TSCCA</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20180413</creationdate><title>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</title><author>Niñerola-Baizán, Aida ; Gallego, Judith ; Cot, Albert ; Aguiar, Pablo ; Lomeña, Francisco ; Pavía, Javier ; Ros, Domènec</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Monte Carlo simulation</topic><topic>nuclear imaging</topic><topic>parkinson's disease</topic><topic>reconstruction parameters optimization</topic><topic>single photon computed emission tomography quantification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Niñerola-Baizán, Aida</creatorcontrib><creatorcontrib>Gallego, Judith</creatorcontrib><creatorcontrib>Cot, Albert</creatorcontrib><creatorcontrib>Aguiar, Pablo</creatorcontrib><creatorcontrib>Lomeña, Francisco</creatorcontrib><creatorcontrib>Pavía, Javier</creatorcontrib><creatorcontrib>Ros, Domènec</creatorcontrib><collection>IOP Publishing Free Content</collection><collection>IOPscience (Open Access)</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Physics in medicine &amp; biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Niñerola-Baizán, Aida</au><au>Gallego, Judith</au><au>Cot, Albert</au><au>Aguiar, Pablo</au><au>Lomeña, Francisco</au><au>Pavía, Javier</au><au>Ros, Domènec</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</atitle><jtitle>Physics in medicine &amp; biology</jtitle><stitle>PMB</stitle><addtitle>Phys. Med. Biol</addtitle><date>2018-04-13</date><risdate>2018</risdate><volume>63</volume><issue>8</issue><spage>085009</spage><epage>085009</epage><pages>085009-085009</pages><issn>0031-9155</issn><issn>1361-6560</issn><eissn>1361-6560</eissn><coden>PHMBA7</coden><abstract>The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.</abstract><cop>England</cop><pub>IOP Publishing</pub><pmid>29553048</pmid><doi>10.1088/1361-6560/aab799</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0031-9155
ispartof Physics in medicine & biology, 2018-04, Vol.63 (8), p.085009-085009
issn 0031-9155
1361-6560
1361-6560
language eng
recordid cdi_crossref_primary_10_1088_1361_6560_aab799
source IOP Publishing Journals; Institute of Physics (IOP) Journals - HEAL-Link
subjects Monte Carlo simulation
nuclear imaging
parkinson's disease
reconstruction parameters optimization
single photon computed emission tomography quantification
title Optimization of the reconstruction parameters in [123I]FP-CIT SPECT
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-28T00%3A24%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Optimization%20of%20the%20reconstruction%20parameters%20in%20%5B123I%5DFP-CIT%20SPECT&rft.jtitle=Physics%20in%20medicine%20&%20biology&rft.au=Ni%C3%B1erola-Baiz%C3%A1n,%20Aida&rft.date=2018-04-13&rft.volume=63&rft.issue=8&rft.spage=085009&rft.epage=085009&rft.pages=085009-085009&rft.issn=0031-9155&rft.eissn=1361-6560&rft.coden=PHMBA7&rft_id=info:doi/10.1088/1361-6560/aab799&rft_dat=%3Cproquest_cross%3E2015409956%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2015409956&rft_id=info:pmid/29553048&rfr_iscdi=true