Optimization of the reconstruction parameters in [123I]FP-CIT SPECT
The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was us...
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Veröffentlicht in: | Physics in medicine & biology 2018-04, Vol.63 (8), p.085009-085009 |
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description | The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used. |
doi_str_mv | 10.1088/1361-6560/aab799 |
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To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.</description><identifier>ISSN: 0031-9155</identifier><identifier>ISSN: 1361-6560</identifier><identifier>EISSN: 1361-6560</identifier><identifier>DOI: 10.1088/1361-6560/aab799</identifier><identifier>PMID: 29553048</identifier><identifier>CODEN: PHMBA7</identifier><language>eng</language><publisher>England: IOP Publishing</publisher><subject>Monte Carlo simulation ; nuclear imaging ; parkinson's disease ; reconstruction parameters optimization ; single photon computed emission tomography quantification</subject><ispartof>Physics in medicine & biology, 2018-04, Vol.63 (8), p.085009-085009</ispartof><rights>2018 Institute of Physics and Engineering in Medicine</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</citedby><cites>FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://iopscience.iop.org/article/10.1088/1361-6560/aab799/pdf$$EPDF$$P50$$Giop$$Hfree_for_read</linktopdf><link.rule.ids>314,776,780,27903,27904,53824,53871</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29553048$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Niñerola-Baizán, Aida</creatorcontrib><creatorcontrib>Gallego, Judith</creatorcontrib><creatorcontrib>Cot, Albert</creatorcontrib><creatorcontrib>Aguiar, Pablo</creatorcontrib><creatorcontrib>Lomeña, Francisco</creatorcontrib><creatorcontrib>Pavía, Javier</creatorcontrib><creatorcontrib>Ros, Domènec</creatorcontrib><title>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</title><title>Physics in medicine & biology</title><addtitle>PMB</addtitle><addtitle>Phys. Med. Biol</addtitle><description>The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.</description><subject>Monte Carlo simulation</subject><subject>nuclear imaging</subject><subject>parkinson's disease</subject><subject>reconstruction parameters optimization</subject><subject>single photon computed emission tomography quantification</subject><issn>0031-9155</issn><issn>1361-6560</issn><issn>1361-6560</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>O3W</sourceid><recordid>eNp1kE1Lw0AQhhdRbK3ePUmOHoyd_Wz2KKHVgtCC9SSybDYbTGmycTc56K83NbU3LzMwPO8L8yB0jeEeQ5JMMRU4FlzAVOtsJuUJGh9Pp2gMQHEsMecjdBHCFgDjhLBzNCKScwosGaN01bRlVX7rtnR15Iqo_bCRt8bVofWd-b022uvKttaHqKyjN0zo8n2xjtPlJnpZz9PNJTor9C7Yq8OeoNfFfJM-xc-rx2X68BwbxljbT0KEzgsxM4YyQfRM2pkkXGQFT4CJPNcm18wyQYFSaYUByAQuCJeQgU7oBN0OvY13n50NrarKYOxup2vruqAIYM5ASi56FAbUeBeCt4VqfFlp_6UwqL06tfek9p7UoK6P3Bzau6yy-THw56oH7gagdI3aus7X_bP_9_0AjSJ1cg</recordid><startdate>20180413</startdate><enddate>20180413</enddate><creator>Niñerola-Baizán, Aida</creator><creator>Gallego, Judith</creator><creator>Cot, Albert</creator><creator>Aguiar, Pablo</creator><creator>Lomeña, Francisco</creator><creator>Pavía, Javier</creator><creator>Ros, Domènec</creator><general>IOP Publishing</general><scope>O3W</scope><scope>TSCCA</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20180413</creationdate><title>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</title><author>Niñerola-Baizán, Aida ; Gallego, Judith ; Cot, Albert ; Aguiar, Pablo ; Lomeña, Francisco ; Pavía, Javier ; Ros, Domènec</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c444t-c4226adf67cc3462a79e79256bf58046ddacda4e4630339e6c00b61f2590b0a83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Monte Carlo simulation</topic><topic>nuclear imaging</topic><topic>parkinson's disease</topic><topic>reconstruction parameters optimization</topic><topic>single photon computed emission tomography quantification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Niñerola-Baizán, Aida</creatorcontrib><creatorcontrib>Gallego, Judith</creatorcontrib><creatorcontrib>Cot, Albert</creatorcontrib><creatorcontrib>Aguiar, Pablo</creatorcontrib><creatorcontrib>Lomeña, Francisco</creatorcontrib><creatorcontrib>Pavía, Javier</creatorcontrib><creatorcontrib>Ros, Domènec</creatorcontrib><collection>IOP Publishing Free Content</collection><collection>IOPscience (Open Access)</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Physics in medicine & biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Niñerola-Baizán, Aida</au><au>Gallego, Judith</au><au>Cot, Albert</au><au>Aguiar, Pablo</au><au>Lomeña, Francisco</au><au>Pavía, Javier</au><au>Ros, Domènec</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Optimization of the reconstruction parameters in [123I]FP-CIT SPECT</atitle><jtitle>Physics in medicine & biology</jtitle><stitle>PMB</stitle><addtitle>Phys. Med. Biol</addtitle><date>2018-04-13</date><risdate>2018</risdate><volume>63</volume><issue>8</issue><spage>085009</spage><epage>085009</epage><pages>085009-085009</pages><issn>0031-9155</issn><issn>1361-6560</issn><eissn>1361-6560</eissn><coden>PHMBA7</coden><abstract>The aim of this work was to obtain a set of parameters to be applied in [123I]FP-CIT SPECT reconstruction in order to minimize the error between standardized and true values of the specific uptake ratio (SUR) in dopaminergic neurotransmission SPECT studies. To this end, Monte Carlo simulation was used to generate a database of 1380 projection data-sets from 23 subjects, including normal cases and a variety of pathologies. Studies were reconstructed using filtered back projection (FBP) with attenuation correction and ordered subset expectation maximization (OSEM) with correction for different degradations (attenuation, scatter and PSF). Reconstruction parameters to be optimized were the cut-off frequency of a 2D Butterworth pre-filter in FBP, and the number of iterations and the full width at Half maximum of a 3D Gaussian post-filter in OSEM. Reconstructed images were quantified using regions of interest (ROIs) derived from Magnetic Resonance scans and from the Automated Anatomical Labeling map. Results were standardized by applying a simple linear regression line obtained from the entire patient dataset. Our findings show that we can obtain a set of optimal parameters for each reconstruction strategy. The accuracy of the standardized SUR increases when the reconstruction method includes more corrections. The use of generic ROIs instead of subject-specific ROIs adds significant inaccuracies. Thus, after reconstruction with OSEM and correction for all degradations, subject-specific ROIs led to errors between standardized and true SUR values in the range [−0.5, +0.5] in 87% and 92% of the cases for caudate and putamen, respectively. These percentages dropped to 75% and 88% when the generic ROIs were used.</abstract><cop>England</cop><pub>IOP Publishing</pub><pmid>29553048</pmid><doi>10.1088/1361-6560/aab799</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Monte Carlo simulation nuclear imaging parkinson's disease reconstruction parameters optimization single photon computed emission tomography quantification |
title | Optimization of the reconstruction parameters in [123I]FP-CIT SPECT |
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