The complete plastome sequence of Illigera grandiflora
Illigera grandiflora, a kind of traditional medicinal liana, belongs to the Illigera Blume of the Hernandiaceae. In this study, we reported the characteristics of complete plastome for I. grandiflora. Its total plastome was 156,138 bp in length, comprising a large single-copy region(LSC) of 84,931 b...
Gespeichert in:
| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2021-08, Vol.6 (8), p.2406-2407 |
|---|---|
| Hauptverfasser: | , , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 2407 |
|---|---|
| container_issue | 8 |
| container_start_page | 2406 |
| container_title | Mitochondrial DNA. Part B. Resources |
| container_volume | 6 |
| creator | Qu, Yaya Yang, Linyi Sun, Zhenghai Ma, Luyao Xin, Jing Song, Yu Xin, Peiyao |
| description | Illigera grandiflora, a kind of traditional medicinal liana, belongs to the Illigera Blume of the Hernandiaceae. In this study, we reported the characteristics of complete plastome for I. grandiflora. Its total plastome was 156,138 bp in length, comprising a large single-copy region(LSC) of 84,931 bp, a small single-copy region (SSC) of 18,544 bp, and a pair of inverted repeat (IR) regions of 26,549 bp. The overall GC content was 39.16% (LSC, 37.77%; SSC, 33.89%; IR, 43.21%). The plastome encoded 134 genes, including 83 protein-coding genes, 42 transfer RNA genes, and 10 ribosomal RNA genes. The relationships in our phylogeny showed that the two Illigera species are located in the same clade, with Hernandia nymphaeifolia being the next sister group, followed by Wilkiea huegeliana. |
| doi_str_mv | 10.1080/23802359.2021.1951625 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1080_23802359_2021_1951625</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_db18bcf6fae941318613f642baa43097</doaj_id><sourcerecordid>2558090401</sourcerecordid><originalsourceid>FETCH-LOGICAL-c510t-ad43a461c87970b712309a8fa332f13597f9ab800c9a9b565fa241806d2c11093</originalsourceid><addsrcrecordid>eNp9kU1v1DAQhiMEolXpTyiKxIXLLjN27NgXBKoKrFSJS3u2Jo69zcqJFzsL6r_H291WLQdOtmbeeebjraoLhCWCgk-MK2Bc6CUDhkvUAiUTr6rTfXyxT7x-9j-pznPeAABK3ra6fVud8IY3ogV9WsmbO1fbOG6Dm129DZTnOLo6u187N1lXR1-vQhjWLlG9TjT1gw8x0bvqjaeQ3fnxPatuv13dXP5YXP_8vrr8er2wAmFeUN9waiRaVfpC1yLjoEl54px5LLO1XlOnAKwm3QkpPLEGFcieWUTQ_KxaHbh9pI3ZpmGkdG8iDeYhENPaUJoHG5zpO1Sd9dKT0w1yVBK5lw3riJrStS2szwfWdteNrrdumhOFF9CXmWm4M-v42yimClAVwMcjIMVynjybccjWhUCTi7tsmBAKNDSARfrhH-km7tJUTlVUkoEWikFRiYPKpphzcv5pGASzN9o8Gm32Rpuj0aXu_fNNnqoebS2CLwfBMPmYRvoTU-jNTPfFO19ctEM2_P89_gK4OrUU</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2562095820</pqid></control><display><type>article</type><title>The complete plastome sequence of Illigera grandiflora</title><source>Taylor & Francis Open Access</source><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><creator>Qu, Yaya ; Yang, Linyi ; Sun, Zhenghai ; Ma, Luyao ; Xin, Jing ; Song, Yu ; Xin, Peiyao</creator><creatorcontrib>Qu, Yaya ; Yang, Linyi ; Sun, Zhenghai ; Ma, Luyao ; Xin, Jing ; Song, Yu ; Xin, Peiyao</creatorcontrib><description>Illigera grandiflora, a kind of traditional medicinal liana, belongs to the Illigera Blume of the Hernandiaceae. In this study, we reported the characteristics of complete plastome for I. grandiflora. Its total plastome was 156,138 bp in length, comprising a large single-copy region(LSC) of 84,931 bp, a small single-copy region (SSC) of 18,544 bp, and a pair of inverted repeat (IR) regions of 26,549 bp. The overall GC content was 39.16% (LSC, 37.77%; SSC, 33.89%; IR, 43.21%). The plastome encoded 134 genes, including 83 protein-coding genes, 42 transfer RNA genes, and 10 ribosomal RNA genes. The relationships in our phylogeny showed that the two Illigera species are located in the same clade, with Hernandia nymphaeifolia being the next sister group, followed by Wilkiea huegeliana.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2021.1951625</identifier><identifier>PMID: 34345709</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>Illigera ; Inverted repeat ; Lianas ; phylogenetic relationship ; Phylogeny ; plastome ; Rapid Communication ; rRNA ; Transfer RNA</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2021-08, Vol.6 (8), p.2406-2407</ispartof><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2021</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This work is licensed under the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2021 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c510t-ad43a461c87970b712309a8fa332f13597f9ab800c9a9b565fa241806d2c11093</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284138/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8284138/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,27479,27901,27902,53766,53768,59116,59117</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34345709$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Qu, Yaya</creatorcontrib><creatorcontrib>Yang, Linyi</creatorcontrib><creatorcontrib>Sun, Zhenghai</creatorcontrib><creatorcontrib>Ma, Luyao</creatorcontrib><creatorcontrib>Xin, Jing</creatorcontrib><creatorcontrib>Song, Yu</creatorcontrib><creatorcontrib>Xin, Peiyao</creatorcontrib><title>The complete plastome sequence of Illigera grandiflora</title><title>Mitochondrial DNA. Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>Illigera grandiflora, a kind of traditional medicinal liana, belongs to the Illigera Blume of the Hernandiaceae. In this study, we reported the characteristics of complete plastome for I. grandiflora. Its total plastome was 156,138 bp in length, comprising a large single-copy region(LSC) of 84,931 bp, a small single-copy region (SSC) of 18,544 bp, and a pair of inverted repeat (IR) regions of 26,549 bp. The overall GC content was 39.16% (LSC, 37.77%; SSC, 33.89%; IR, 43.21%). The plastome encoded 134 genes, including 83 protein-coding genes, 42 transfer RNA genes, and 10 ribosomal RNA genes. The relationships in our phylogeny showed that the two Illigera species are located in the same clade, with Hernandia nymphaeifolia being the next sister group, followed by Wilkiea huegeliana.</description><subject>Illigera</subject><subject>Inverted repeat</subject><subject>Lianas</subject><subject>phylogenetic relationship</subject><subject>Phylogeny</subject><subject>plastome</subject><subject>Rapid Communication</subject><subject>rRNA</subject><subject>Transfer RNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9kU1v1DAQhiMEolXpTyiKxIXLLjN27NgXBKoKrFSJS3u2Jo69zcqJFzsL6r_H291WLQdOtmbeeebjraoLhCWCgk-MK2Bc6CUDhkvUAiUTr6rTfXyxT7x-9j-pznPeAABK3ra6fVud8IY3ogV9WsmbO1fbOG6Dm129DZTnOLo6u187N1lXR1-vQhjWLlG9TjT1gw8x0bvqjaeQ3fnxPatuv13dXP5YXP_8vrr8er2wAmFeUN9waiRaVfpC1yLjoEl54px5LLO1XlOnAKwm3QkpPLEGFcieWUTQ_KxaHbh9pI3ZpmGkdG8iDeYhENPaUJoHG5zpO1Sd9dKT0w1yVBK5lw3riJrStS2szwfWdteNrrdumhOFF9CXmWm4M-v42yimClAVwMcjIMVynjybccjWhUCTi7tsmBAKNDSARfrhH-km7tJUTlVUkoEWikFRiYPKpphzcv5pGASzN9o8Gm32Rpuj0aXu_fNNnqoebS2CLwfBMPmYRvoTU-jNTPfFO19ctEM2_P89_gK4OrUU</recordid><startdate>20210803</startdate><enddate>20210803</enddate><creator>Qu, Yaya</creator><creator>Yang, Linyi</creator><creator>Sun, Zhenghai</creator><creator>Ma, Luyao</creator><creator>Xin, Jing</creator><creator>Song, Yu</creator><creator>Xin, Peiyao</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20210803</creationdate><title>The complete plastome sequence of Illigera grandiflora</title><author>Qu, Yaya ; Yang, Linyi ; Sun, Zhenghai ; Ma, Luyao ; Xin, Jing ; Song, Yu ; Xin, Peiyao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c510t-ad43a461c87970b712309a8fa332f13597f9ab800c9a9b565fa241806d2c11093</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Illigera</topic><topic>Inverted repeat</topic><topic>Lianas</topic><topic>phylogenetic relationship</topic><topic>Phylogeny</topic><topic>plastome</topic><topic>Rapid Communication</topic><topic>rRNA</topic><topic>Transfer RNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Qu, Yaya</creatorcontrib><creatorcontrib>Yang, Linyi</creatorcontrib><creatorcontrib>Sun, Zhenghai</creatorcontrib><creatorcontrib>Ma, Luyao</creatorcontrib><creatorcontrib>Xin, Jing</creatorcontrib><creatorcontrib>Song, Yu</creatorcontrib><creatorcontrib>Xin, Peiyao</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. Part B. Resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Qu, Yaya</au><au>Yang, Linyi</au><au>Sun, Zhenghai</au><au>Ma, Luyao</au><au>Xin, Jing</au><au>Song, Yu</au><au>Xin, Peiyao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The complete plastome sequence of Illigera grandiflora</atitle><jtitle>Mitochondrial DNA. Part B. Resources</jtitle><addtitle>Mitochondrial DNA B Resour</addtitle><date>2021-08-03</date><risdate>2021</risdate><volume>6</volume><issue>8</issue><spage>2406</spage><epage>2407</epage><pages>2406-2407</pages><issn>2380-2359</issn><eissn>2380-2359</eissn><abstract>Illigera grandiflora, a kind of traditional medicinal liana, belongs to the Illigera Blume of the Hernandiaceae. In this study, we reported the characteristics of complete plastome for I. grandiflora. Its total plastome was 156,138 bp in length, comprising a large single-copy region(LSC) of 84,931 bp, a small single-copy region (SSC) of 18,544 bp, and a pair of inverted repeat (IR) regions of 26,549 bp. The overall GC content was 39.16% (LSC, 37.77%; SSC, 33.89%; IR, 43.21%). The plastome encoded 134 genes, including 83 protein-coding genes, 42 transfer RNA genes, and 10 ribosomal RNA genes. The relationships in our phylogeny showed that the two Illigera species are located in the same clade, with Hernandia nymphaeifolia being the next sister group, followed by Wilkiea huegeliana.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>34345709</pmid><doi>10.1080/23802359.2021.1951625</doi><tpages>2</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 2380-2359 |
| ispartof | Mitochondrial DNA. Part B. Resources, 2021-08, Vol.6 (8), p.2406-2407 |
| issn | 2380-2359 2380-2359 |
| language | eng |
| recordid | cdi_crossref_primary_10_1080_23802359_2021_1951625 |
| source | Taylor & Francis Open Access; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
| subjects | Illigera Inverted repeat Lianas phylogenetic relationship Phylogeny plastome Rapid Communication rRNA Transfer RNA |
| title | The complete plastome sequence of Illigera grandiflora |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-08T23%3A42%3A27IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=The%20complete%20plastome%20sequence%20of%20Illigera%20grandiflora&rft.jtitle=Mitochondrial%20DNA.%20Part%20B.%20Resources&rft.au=Qu,%20Yaya&rft.date=2021-08-03&rft.volume=6&rft.issue=8&rft.spage=2406&rft.epage=2407&rft.pages=2406-2407&rft.issn=2380-2359&rft.eissn=2380-2359&rft_id=info:doi/10.1080/23802359.2021.1951625&rft_dat=%3Cproquest_cross%3E2558090401%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2562095820&rft_id=info:pmid/34345709&rft_doaj_id=oai_doaj_org_article_db18bcf6fae941318613f642baa43097&rfr_iscdi=true |