The complete chloroplast genome of Abies georgei Orr var. smithii, a species endemic to the Qinghai-Tibet Plateau, China
Abies georgei Orr var. smithii is an evergreen coniferous species of Pinaceae, and is endemic to the Qinghai-Tibet Plateau of China. Considering its vital ecological functions in this unique area, the complete chloroplast (cp) genome was constructed in this study to provide genetic information for i...
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| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2020-07, Vol.5 (3), p.2553-2554 |
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| description | Abies georgei Orr var. smithii is an evergreen coniferous species of Pinaceae, and is endemic to the Qinghai-Tibet Plateau of China. Considering its vital ecological functions in this unique area, the complete chloroplast (cp) genome was constructed in this study to provide genetic information for its further study of conservation and evolution. The complete cp genome is 121,213 bp in length with GC content of 38.3%, and contains a tetrad structure, including a large single copy region of 76,278 bp, a small single copy of 42,575 bp, and two very short repeats of 1,180 bp for each. Besides, it contains 113 genes in total, including 74 CDSs, 35 tRNAs, and four rRNAs. This genome has been deposited in Genbank under accession number of MT527722. |
| doi_str_mv | 10.1080/23802359.2020.1780981 |
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Considering its vital ecological functions in this unique area, the complete chloroplast (cp) genome was constructed in this study to provide genetic information for its further study of conservation and evolution. The complete cp genome is 121,213 bp in length with GC content of 38.3%, and contains a tetrad structure, including a large single copy region of 76,278 bp, a small single copy of 42,575 bp, and two very short repeats of 1,180 bp for each. Besides, it contains 113 genes in total, including 74 CDSs, 35 tRNAs, and four rRNAs. 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Published by Informa UK Limited, trading as Taylor & Francis Group. 2020 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4771-f6bbfa15eb2ccb8dc506f3ba808c5b4b70921f3d57358142331f6b61286648e03</citedby><cites>FETCH-LOGICAL-c4771-f6bbfa15eb2ccb8dc506f3ba808c5b4b70921f3d57358142331f6b61286648e03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783149/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7783149/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,27479,27901,27902,53766,53768,59116,59117</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33457860$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Jiang-Rong</creatorcontrib><creatorcontrib>Chen, Jia-Rui</creatorcontrib><creatorcontrib>Wang, Jian-Ke</creatorcontrib><creatorcontrib>Zheng, Wei-Lie</creatorcontrib><title>The complete chloroplast genome of Abies georgei Orr var. smithii, a species endemic to the Qinghai-Tibet Plateau, China</title><title>Mitochondrial DNA. Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>Abies georgei Orr var. smithii is an evergreen coniferous species of Pinaceae, and is endemic to the Qinghai-Tibet Plateau of China. Considering its vital ecological functions in this unique area, the complete chloroplast (cp) genome was constructed in this study to provide genetic information for its further study of conservation and evolution. The complete cp genome is 121,213 bp in length with GC content of 38.3%, and contains a tetrad structure, including a large single copy region of 76,278 bp, a small single copy of 42,575 bp, and two very short repeats of 1,180 bp for each. Besides, it contains 113 genes in total, including 74 CDSs, 35 tRNAs, and four rRNAs. This genome has been deposited in Genbank under accession number of MT527722.</description><subject>Abies georgei</subject><subject>Chloroplasts</subject><subject>Coniferous</subject><subject>Endemic species</subject><subject>Evolutionary conservation</subject><subject>Genomes</subject><subject>Mitogenome Announcement</subject><subject>phylogeny</subject><subject>Pinaceae</subject><subject>plastid genome</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9kk1v1DAQhiMEolXpTwBZ4sKhu_gzdi6IasVHpUoFaTlbjjPeeJXEi-0t9N_jsNuq5cDJ45l3nvFYb1W9JnhJsMLvKVOYMtEsKaYlJRVuFHlWnc75xVx4_ig-qc5T2mKMSc2kbOTL6oQxLqSq8Wn1e90DsmHcDZBL0A8hht1gUkYbmMIIKDh02XpI5R7iBjy6iRHdmrhEafS59_4CGZR2YGcNTB2M3qIcUC7c737a9MYv1r6FjL4NJoPZX6BV7yfzqnrhzJDg_HieVT8-f1qvvi6ub75crS6vF5ZLSRaubltniICWWtuqzgpcO9YahZUVLW8lbihxrBOSCUU4ZYyUlppQVddcAWZn1dWB2wWz1bvoRxPvdDBe_02UnbSJ2dsBNGeUd4ClIQAcnDKcO9qZDoMVtLa0sD4cWLt9O0JnYcrRDE-gTyuT7_Um3GopFSO8KYB3R0AMP_eQsh59sjAMZoKwT5pyqcrWisyz3v4j3YZ9nMpXaSooFYSTRhWVOKhsDClFcA-PIVjPVtH3VtGzVfTRKqXvzeNNHrrujVEEHw8CP7kQR_MrxKHT2dwVg7hoJuuTZv-f8QfA3c01</recordid><startdate>20200702</startdate><enddate>20200702</enddate><creator>Li, Jiang-Rong</creator><creator>Chen, Jia-Rui</creator><creator>Wang, Jian-Ke</creator><creator>Zheng, Wei-Lie</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20200702</creationdate><title>The complete chloroplast genome of Abies georgei Orr var. smithii, a species endemic to the Qinghai-Tibet Plateau, China</title><author>Li, Jiang-Rong ; Chen, Jia-Rui ; Wang, Jian-Ke ; Zheng, Wei-Lie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4771-f6bbfa15eb2ccb8dc506f3ba808c5b4b70921f3d57358142331f6b61286648e03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Abies georgei</topic><topic>Chloroplasts</topic><topic>Coniferous</topic><topic>Endemic species</topic><topic>Evolutionary conservation</topic><topic>Genomes</topic><topic>Mitogenome Announcement</topic><topic>phylogeny</topic><topic>Pinaceae</topic><topic>plastid genome</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Jiang-Rong</creatorcontrib><creatorcontrib>Chen, Jia-Rui</creatorcontrib><creatorcontrib>Wang, Jian-Ke</creatorcontrib><creatorcontrib>Zheng, Wei-Lie</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. 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| subjects | Abies georgei Chloroplasts Coniferous Endemic species Evolutionary conservation Genomes Mitogenome Announcement phylogeny Pinaceae plastid genome |
| title | The complete chloroplast genome of Abies georgei Orr var. smithii, a species endemic to the Qinghai-Tibet Plateau, China |
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