Comparative amino acid analysis of coat proteins of Plum Pox Virus isolates
Seven PPV isolates from different natural hosts were compared on the base of amino acid sequences of their coat protein genes.The results obtained allowed the division of that isolates into two subgroups - A and B.Two of the isolates, PPV-C and PPV-NL showed high level of identity with D and AT isol...
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| Veröffentlicht in: | Biotechnology, biotechnological equipment biotechnological equipment, 2001, Vol.15 (1), p.45-50 |
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| creator | Kamenova, I. (Agrobioinstitute, National Centre of Agricultural Science, Kostinbrod (Bulgaria)) Lohuis, D Peters, D |
| description | Seven PPV isolates from different natural hosts were compared on the base of amino acid sequences of their coat protein genes.The results obtained allowed the division of that isolates into two subgroups - A and B.Two of the isolates, PPV-C and PPV-NL showed high level of identity with D and AT isolates and were placed into subgroup A. PPV-P48, PPV-P45 and PPV-II/7 shared significant sequence homology also with D and AT strains, but they all had deletions in their coat proteins and formed a detached subcloster into subgroup A. PPV-A and PPV-P isolates were placed into subgroup B, on the base of high level of identities with the Hungarium isolate SK-68. |
| doi_str_mv | 10.1080/13102818.2001.10819103 |
| format | Article |
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(Agrobioinstitute, National Centre of Agricultural Science, Kostinbrod (Bulgaria)) ; Lohuis, D ; Peters, D</creator><creatorcontrib>Kamenova, I. (Agrobioinstitute, National Centre of Agricultural Science, Kostinbrod (Bulgaria)) ; Lohuis, D ; Peters, D ; Diagnosis Press, Sofia (Bulgaria)</creatorcontrib><description>Seven PPV isolates from different natural hosts were compared on the base of amino acid sequences of their coat protein genes.The results obtained allowed the division of that isolates into two subgroups - A and B.Two of the isolates, PPV-C and PPV-NL showed high level of identity with D and AT isolates and were placed into subgroup A. PPV-P48, PPV-P45 and PPV-II/7 shared significant sequence homology also with D and AT strains, but they all had deletions in their coat proteins and formed a detached subcloster into subgroup A. PPV-A and PPV-P isolates were placed into subgroup B, on the base of high level of identities with the Hungarium isolate SK-68.</description><identifier>ISSN: 1310-2818</identifier><identifier>EISSN: 1314-3530</identifier><identifier>DOI: 10.1080/13102818.2001.10819103</identifier><language>eng</language><publisher>Taylor & Francis</publisher><subject>AMINO ACID SEQUENCES ; GENE ; GENES ; MICROBIAL PROTEINS ; PLUM POX POTYVIRUS ; POTYVIRUS SHARKA DEL CIRUELO ; POTYVIRUS SHARKA DU PRUNIER ; PROTEINAS MICROBIANAS ; PROTEINE MICROBIENNE</subject><ispartof>Biotechnology, biotechnological equipment, 2001, Vol.15 (1), p.45-50</ispartof><rights>2001 Taylor and Francis Group, LLC 2001</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c381t-ebd9a7b55b0b06b59a1d631376c2ca4c317b0a3e9e9691252a71a9cbda34a90f3</citedby><cites>FETCH-LOGICAL-c381t-ebd9a7b55b0b06b59a1d631376c2ca4c317b0a3e9e9691252a71a9cbda34a90f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids></links><search><creatorcontrib>Kamenova, I. (Agrobioinstitute, National Centre of Agricultural Science, Kostinbrod (Bulgaria))</creatorcontrib><creatorcontrib>Lohuis, D</creatorcontrib><creatorcontrib>Peters, D</creatorcontrib><creatorcontrib>Diagnosis Press, Sofia (Bulgaria)</creatorcontrib><title>Comparative amino acid analysis of coat proteins of Plum Pox Virus isolates</title><title>Biotechnology, biotechnological equipment</title><description>Seven PPV isolates from different natural hosts were compared on the base of amino acid sequences of their coat protein genes.The results obtained allowed the division of that isolates into two subgroups - A and B.Two of the isolates, PPV-C and PPV-NL showed high level of identity with D and AT isolates and were placed into subgroup A. PPV-P48, PPV-P45 and PPV-II/7 shared significant sequence homology also with D and AT strains, but they all had deletions in their coat proteins and formed a detached subcloster into subgroup A. PPV-A and PPV-P isolates were placed into subgroup B, on the base of high level of identities with the Hungarium isolate SK-68.</description><subject>AMINO ACID SEQUENCES</subject><subject>GENE</subject><subject>GENES</subject><subject>MICROBIAL PROTEINS</subject><subject>PLUM POX POTYVIRUS</subject><subject>POTYVIRUS SHARKA DEL CIRUELO</subject><subject>POTYVIRUS SHARKA DU PRUNIER</subject><subject>PROTEINAS MICROBIANAS</subject><subject>PROTEINE MICROBIENNE</subject><issn>1310-2818</issn><issn>1314-3530</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2001</creationdate><recordtype>article</recordtype><recordid>eNqFkN1OwzAMhSMEEmPwCKC8QIfdrD-5HBMMxCR2AdxGbpqioLaZkg7o29Nu7BrLki37nHPxMXaDMEPI4RYFQpxjPosBcDyhRBAnbDI85pFIBJzud4hG1Tm7COETIBvE2YQ9L12zJU-d_TKcGts6TtqWnFqq-2ADdxXXjjq-9a4ztt0fNvWu4Rv3w9-t3wVug6upM-GSnVVUB3P1N6fs7eH-dfkYrV9WT8vFOtIixy4yRSkpK5KkgALSIpGEZSpQZKmONc21wKwAEkYamUqMk5gyJKmLksScJFRiytJDrvYuBG8qtfW2Id8rBDUiUUckakSijkgG4-JgtG3lfEPfztel6qivna88tdoGJf7NuD5kVOQUffjBcrcaJEMPlYhfAXxxBw</recordid><startdate>2001</startdate><enddate>2001</enddate><creator>Kamenova, I. 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(Agrobioinstitute, National Centre of Agricultural Science, Kostinbrod (Bulgaria))</creatorcontrib><creatorcontrib>Lohuis, D</creatorcontrib><creatorcontrib>Peters, D</creatorcontrib><creatorcontrib>Diagnosis Press, Sofia (Bulgaria)</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><jtitle>Biotechnology, biotechnological equipment</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kamenova, I. 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PPV-P48, PPV-P45 and PPV-II/7 shared significant sequence homology also with D and AT strains, but they all had deletions in their coat proteins and formed a detached subcloster into subgroup A. PPV-A and PPV-P isolates were placed into subgroup B, on the base of high level of identities with the Hungarium isolate SK-68.</abstract><pub>Taylor & Francis</pub><doi>10.1080/13102818.2001.10819103</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Biotechnology, biotechnological equipment, 2001, Vol.15 (1), p.45-50 |
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| source | EZB-FREE-00999 freely available EZB journals |
| subjects | AMINO ACID SEQUENCES GENE GENES MICROBIAL PROTEINS PLUM POX POTYVIRUS POTYVIRUS SHARKA DEL CIRUELO POTYVIRUS SHARKA DU PRUNIER PROTEINAS MICROBIANAS PROTEINE MICROBIENNE |
| title | Comparative amino acid analysis of coat proteins of Plum Pox Virus isolates |
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