NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy
Diatomic ligands in hemoproteins and the way they bind to the active center are central to the protein’s function. Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitros...
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Veröffentlicht in: | Proceedings of the National Academy of Sciences - PNAS 2015-10, Vol.112 (42), p.12922-12927 |
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creator | Silatani, Mahsa Lima, Frederico A. Penfold, Thomas J. Rittmann, Jochen Reinhard, Marco E. Rittmann-Frank, Hannelore M. Borca, Camelia Grolimund, Daniel Milne, Christopher J. Chergui, Majed |
description | Diatomic ligands in hemoproteins and the way they bind to the active center are central to the protein’s function. Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitrosylmyoglobin (MbNO) in physiological solutions. The transients at 70 and 300 ps are identical, but they deviate from the difference between the static spectra of deoxymyoglobin and MbNO, showing the formation of an intermediate species. We propose the latter to be a six-coordinated domed species that is populated on a timescale of ∼200 ps by recombination with NO ligands. This work shows the feasibility of ultrafast pump–probe X-ray spectroscopic studies of proteins in physiological media, delivering insight into the electronic and geometric structure of the active center. |
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Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitrosylmyoglobin (MbNO) in physiological solutions. The transients at 70 and 300 ps are identical, but they deviate from the difference between the static spectra of deoxymyoglobin and MbNO, showing the formation of an intermediate species. We propose the latter to be a six-coordinated domed species that is populated on a timescale of ∼200 ps by recombination with NO ligands. This work shows the feasibility of ultrafast pump–probe X-ray spectroscopic studies of proteins in physiological media, delivering insight into the electronic and geometric structure of the active center.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.1424446112</identifier><identifier>PMID: 26438842</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Absorption spectroscopy ; Enzyme kinetics ; Kinetics ; Ligands ; Molecules ; Myoglobin - metabolism ; Myoglobins ; Nitric Oxide - metabolism ; Physical Sciences ; Physiology ; Proteins ; Spectrum analysis ; Spectrum Analysis - methods</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2015-10, Vol.112 (42), p.12922-12927</ispartof><rights>Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles</rights><rights>Copyright National Academy of Sciences Oct 20, 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c501t-d6d4ea8dea9d032860c8fb764710d9d26a3f613f660f3f9bf0a4ab1a7b4f121c3</citedby><cites>FETCH-LOGICAL-c501t-d6d4ea8dea9d032860c8fb764710d9d26a3f613f660f3f9bf0a4ab1a7b4f121c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/112/42.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/26465540$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/26465540$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,803,885,27924,27925,53791,53793,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26438842$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Silatani, Mahsa</creatorcontrib><creatorcontrib>Lima, Frederico A.</creatorcontrib><creatorcontrib>Penfold, Thomas J.</creatorcontrib><creatorcontrib>Rittmann, Jochen</creatorcontrib><creatorcontrib>Reinhard, Marco E.</creatorcontrib><creatorcontrib>Rittmann-Frank, Hannelore M.</creatorcontrib><creatorcontrib>Borca, Camelia</creatorcontrib><creatorcontrib>Grolimund, Daniel</creatorcontrib><creatorcontrib>Milne, Christopher J.</creatorcontrib><creatorcontrib>Chergui, Majed</creatorcontrib><title>NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>Diatomic ligands in hemoproteins and the way they bind to the active center are central to the protein’s function. Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitrosylmyoglobin (MbNO) in physiological solutions. The transients at 70 and 300 ps are identical, but they deviate from the difference between the static spectra of deoxymyoglobin and MbNO, showing the formation of an intermediate species. We propose the latter to be a six-coordinated domed species that is populated on a timescale of ∼200 ps by recombination with NO ligands. This work shows the feasibility of ultrafast pump–probe X-ray spectroscopic studies of proteins in physiological media, delivering insight into the electronic and geometric structure of the active center.</description><subject>Absorption spectroscopy</subject><subject>Enzyme kinetics</subject><subject>Kinetics</subject><subject>Ligands</subject><subject>Molecules</subject><subject>Myoglobin - metabolism</subject><subject>Myoglobins</subject><subject>Nitric Oxide - metabolism</subject><subject>Physical Sciences</subject><subject>Physiology</subject><subject>Proteins</subject><subject>Spectrum analysis</subject><subject>Spectrum Analysis - methods</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkcGP1CAUxonRuOPq2ZOGxIuX7r4HlNKLidm4aty4Fz0aQoGOjB2opbPJ_PfSzDiunkwghHy_98F7HyHPES4QGn45RpMvUDAhhERkD8gKocVKihYekhUAaypV1DPyJOcNALS1gsfkjEnBVRFW5NvnW9qF6EJc0x8h-jnYTEOk231aD6ko5XLn8xzWZvaOdns6Bpuytyk6eu3pp8q7taemy2ka55AizaO385SyTeP-KXnUmyH7Z8fznHy9fvfl6kN1c_v-49Xbm8rWgHPlpBPeKOdN64AzJcGqvmukaBBc65g0vJdYtoSe923XgxGmQ9N0okeGlp-TNwffcddtvbM-zpMZ9DiFrZn2Opmg_1Zi-K7X6U4LyUC1WAxeHw2m9HNX-tXbkK0fBhN92mWNjZCqqZWC_0BZXSNvOCvoq3_QTdpNsUxioVrFy1revjxQtkwtT74__RtBLynrJWX9J-VS8fJ-uyf-d6wFoEdgqTzZIdOCaWQtW5AXB2ST5zTdt5B1LYD_AnFauGw</recordid><startdate>20151020</startdate><enddate>20151020</enddate><creator>Silatani, Mahsa</creator><creator>Lima, Frederico A.</creator><creator>Penfold, Thomas J.</creator><creator>Rittmann, Jochen</creator><creator>Reinhard, Marco E.</creator><creator>Rittmann-Frank, Hannelore M.</creator><creator>Borca, Camelia</creator><creator>Grolimund, Daniel</creator><creator>Milne, Christopher J.</creator><creator>Chergui, Majed</creator><general>National Academy of Sciences</general><general>National Acad Sciences</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>7ST</scope><scope>SOI</scope><scope>5PM</scope></search><sort><creationdate>20151020</creationdate><title>NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy</title><author>Silatani, Mahsa ; 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subjects | Absorption spectroscopy Enzyme kinetics Kinetics Ligands Molecules Myoglobin - metabolism Myoglobins Nitric Oxide - metabolism Physical Sciences Physiology Proteins Spectrum analysis Spectrum Analysis - methods |
title | NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy |
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