Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data
Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is us...
Gespeichert in:
Veröffentlicht in: | Australian journal of agricultural research 2008-01, Vol.59 (12), p.1103-1112 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 1112 |
---|---|
container_issue | 12 |
container_start_page | 1103 |
container_title | Australian journal of agricultural research |
container_volume | 59 |
creator | Ghamkhar, K Snowball, R Wintle, B.J Brown, A.H.D |
description | Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core. |
doi_str_mv | 10.1071/AR08209 |
format | Article |
fullrecord | <record><control><sourceid>fao_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1071_AR08209</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>US201301559017</sourcerecordid><originalsourceid>FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</originalsourceid><addsrcrecordid>eNo9kE1PwzAMhiMEEmMgfgK5IOBQcJqmbY5o4kuahMTgXLn5GEHtUiUdEmf-OBmbdrEt6_H72ibknMEtg4rd3b9BnYM8IBNW8zITlRSHZAIARSYLkMfkJMYvgLIQrJyQ38UYcDRLZyK1PlBtvk3nB7daUqTKB5NC1xk1Or-i3tK2Q61NoKrz3yld0_fgrO_cuqdxWPc-pmJ-e0PXcSNh0rBfOoUdxZWmuAw-630YPvdtjSOekiOLXTRnuzwlH48P77PnbP769DK7n2eK82rMpBBFWee1NFpLpbgWVuYCQeel5nVV5y22okVlLVMKDeelKguAvDaKCdZWfEqutroq-BiDsc0QXI_hp2HQbH7X7H6XyMstOWBMW9qAK-XiHt8gsqhE4i62nEXfpOsS87HIgXFgQkhgG0-684wu-L0Chn-j5nPs-R_y8IR2</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</title><source>CSIRO Publishing Journals</source><creator>Ghamkhar, K ; Snowball, R ; Wintle, B.J ; Brown, A.H.D</creator><creatorcontrib>Ghamkhar, K ; Snowball, R ; Wintle, B.J ; Brown, A.H.D</creatorcontrib><description>Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.</description><identifier>ISSN: 0004-9409</identifier><identifier>EISSN: 1836-5795</identifier><identifier>DOI: 10.1071/AR08209</identifier><identifier>CODEN: AJAEA9</identifier><language>eng</language><publisher>Collingwood: Collingwood, Victoria: CSIRO Publishing</publisher><subject>Agronomy. Soil science and plant productions ; Animal, plant and microbial ecology ; Biological and medical sciences ; canonical redundancy analysis ; canonical redundancy analysis (RDA) ; cluster analysis ; core size ; ecogeography ; ecoregions ; forage legumes ; Fundamental and applied biological sciences. Psychology ; germplasm conservation ; GIS ; MSTRAT ; plant ecology ; plant morphology ; sampling ; sampling strategy ; statistical analysis ; Trifolium ; Trifolium spumosum</subject><ispartof>Australian journal of agricultural research, 2008-01, Vol.59 (12), p.1103-1112</ispartof><rights>2009 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</citedby><cites>FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,3339,3340,27907,27908</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20939475$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Ghamkhar, K</creatorcontrib><creatorcontrib>Snowball, R</creatorcontrib><creatorcontrib>Wintle, B.J</creatorcontrib><creatorcontrib>Brown, A.H.D</creatorcontrib><title>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</title><title>Australian journal of agricultural research</title><description>Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Animal, plant and microbial ecology</subject><subject>Biological and medical sciences</subject><subject>canonical redundancy analysis</subject><subject>canonical redundancy analysis (RDA)</subject><subject>cluster analysis</subject><subject>core size</subject><subject>ecogeography</subject><subject>ecoregions</subject><subject>forage legumes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>germplasm conservation</subject><subject>GIS</subject><subject>MSTRAT</subject><subject>plant ecology</subject><subject>plant morphology</subject><subject>sampling</subject><subject>sampling strategy</subject><subject>statistical analysis</subject><subject>Trifolium</subject><subject>Trifolium spumosum</subject><issn>0004-9409</issn><issn>1836-5795</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><recordid>eNo9kE1PwzAMhiMEEmMgfgK5IOBQcJqmbY5o4kuahMTgXLn5GEHtUiUdEmf-OBmbdrEt6_H72ibknMEtg4rd3b9BnYM8IBNW8zITlRSHZAIARSYLkMfkJMYvgLIQrJyQ38UYcDRLZyK1PlBtvk3nB7daUqTKB5NC1xk1Or-i3tK2Q61NoKrz3yld0_fgrO_cuqdxWPc-pmJ-e0PXcSNh0rBfOoUdxZWmuAw-630YPvdtjSOekiOLXTRnuzwlH48P77PnbP769DK7n2eK82rMpBBFWee1NFpLpbgWVuYCQeel5nVV5y22okVlLVMKDeelKguAvDaKCdZWfEqutroq-BiDsc0QXI_hp2HQbH7X7H6XyMstOWBMW9qAK-XiHt8gsqhE4i62nEXfpOsS87HIgXFgQkhgG0-684wu-L0Chn-j5nPs-R_y8IR2</recordid><startdate>20080101</startdate><enddate>20080101</enddate><creator>Ghamkhar, K</creator><creator>Snowball, R</creator><creator>Wintle, B.J</creator><creator>Brown, A.H.D</creator><general>Collingwood, Victoria: CSIRO Publishing</general><general>Commonwealth Scientific and Industrial Research Organization</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20080101</creationdate><title>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</title><author>Ghamkhar, K ; Snowball, R ; Wintle, B.J ; Brown, A.H.D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Agronomy. Soil science and plant productions</topic><topic>Animal, plant and microbial ecology</topic><topic>Biological and medical sciences</topic><topic>canonical redundancy analysis</topic><topic>canonical redundancy analysis (RDA)</topic><topic>cluster analysis</topic><topic>core size</topic><topic>ecogeography</topic><topic>ecoregions</topic><topic>forage legumes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>germplasm conservation</topic><topic>GIS</topic><topic>MSTRAT</topic><topic>plant ecology</topic><topic>plant morphology</topic><topic>sampling</topic><topic>sampling strategy</topic><topic>statistical analysis</topic><topic>Trifolium</topic><topic>Trifolium spumosum</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ghamkhar, K</creatorcontrib><creatorcontrib>Snowball, R</creatorcontrib><creatorcontrib>Wintle, B.J</creatorcontrib><creatorcontrib>Brown, A.H.D</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><jtitle>Australian journal of agricultural research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ghamkhar, K</au><au>Snowball, R</au><au>Wintle, B.J</au><au>Brown, A.H.D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</atitle><jtitle>Australian journal of agricultural research</jtitle><date>2008-01-01</date><risdate>2008</risdate><volume>59</volume><issue>12</issue><spage>1103</spage><epage>1112</epage><pages>1103-1112</pages><issn>0004-9409</issn><eissn>1836-5795</eissn><coden>AJAEA9</coden><abstract>Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.</abstract><cop>Collingwood</cop><pub>Collingwood, Victoria: CSIRO Publishing</pub><doi>10.1071/AR08209</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0004-9409 |
ispartof | Australian journal of agricultural research, 2008-01, Vol.59 (12), p.1103-1112 |
issn | 0004-9409 1836-5795 |
language | eng |
recordid | cdi_crossref_primary_10_1071_AR08209 |
source | CSIRO Publishing Journals |
subjects | Agronomy. Soil science and plant productions Animal, plant and microbial ecology Biological and medical sciences canonical redundancy analysis canonical redundancy analysis (RDA) cluster analysis core size ecogeography ecoregions forage legumes Fundamental and applied biological sciences. Psychology germplasm conservation GIS MSTRAT plant ecology plant morphology sampling sampling strategy statistical analysis Trifolium Trifolium spumosum |
title | Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-16T20%3A21%3A29IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-fao_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Strategies%20for%20developing%20a%20core%20collection%20of%20bladder%20clover%20(%20Trifolium%20spumosum%20L.)%20using%20ecological%20and%20agro-morphological%20data&rft.jtitle=Australian%20journal%20of%20agricultural%20research&rft.au=Ghamkhar,%20K&rft.date=2008-01-01&rft.volume=59&rft.issue=12&rft.spage=1103&rft.epage=1112&rft.pages=1103-1112&rft.issn=0004-9409&rft.eissn=1836-5795&rft.coden=AJAEA9&rft_id=info:doi/10.1071/AR08209&rft_dat=%3Cfao_cross%3EUS201301559017%3C/fao_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true |