Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data

Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is us...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Australian journal of agricultural research 2008-01, Vol.59 (12), p.1103-1112
Hauptverfasser: Ghamkhar, K, Snowball, R, Wintle, B.J, Brown, A.H.D
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1112
container_issue 12
container_start_page 1103
container_title Australian journal of agricultural research
container_volume 59
creator Ghamkhar, K
Snowball, R
Wintle, B.J
Brown, A.H.D
description Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.
doi_str_mv 10.1071/AR08209
format Article
fullrecord <record><control><sourceid>fao_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1071_AR08209</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>US201301559017</sourcerecordid><originalsourceid>FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</originalsourceid><addsrcrecordid>eNo9kE1PwzAMhiMEEmMgfgK5IOBQcJqmbY5o4kuahMTgXLn5GEHtUiUdEmf-OBmbdrEt6_H72ibknMEtg4rd3b9BnYM8IBNW8zITlRSHZAIARSYLkMfkJMYvgLIQrJyQ38UYcDRLZyK1PlBtvk3nB7daUqTKB5NC1xk1Or-i3tK2Q61NoKrz3yld0_fgrO_cuqdxWPc-pmJ-e0PXcSNh0rBfOoUdxZWmuAw-630YPvdtjSOekiOLXTRnuzwlH48P77PnbP769DK7n2eK82rMpBBFWee1NFpLpbgWVuYCQeel5nVV5y22okVlLVMKDeelKguAvDaKCdZWfEqutroq-BiDsc0QXI_hp2HQbH7X7H6XyMstOWBMW9qAK-XiHt8gsqhE4i62nEXfpOsS87HIgXFgQkhgG0-684wu-L0Chn-j5nPs-R_y8IR2</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</title><source>CSIRO Publishing Journals</source><creator>Ghamkhar, K ; Snowball, R ; Wintle, B.J ; Brown, A.H.D</creator><creatorcontrib>Ghamkhar, K ; Snowball, R ; Wintle, B.J ; Brown, A.H.D</creatorcontrib><description>Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.</description><identifier>ISSN: 0004-9409</identifier><identifier>EISSN: 1836-5795</identifier><identifier>DOI: 10.1071/AR08209</identifier><identifier>CODEN: AJAEA9</identifier><language>eng</language><publisher>Collingwood: Collingwood, Victoria: CSIRO Publishing</publisher><subject>Agronomy. Soil science and plant productions ; Animal, plant and microbial ecology ; Biological and medical sciences ; canonical redundancy analysis ; canonical redundancy analysis (RDA) ; cluster analysis ; core size ; ecogeography ; ecoregions ; forage legumes ; Fundamental and applied biological sciences. Psychology ; germplasm conservation ; GIS ; MSTRAT ; plant ecology ; plant morphology ; sampling ; sampling strategy ; statistical analysis ; Trifolium ; Trifolium spumosum</subject><ispartof>Australian journal of agricultural research, 2008-01, Vol.59 (12), p.1103-1112</ispartof><rights>2009 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</citedby><cites>FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,3339,3340,27907,27908</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=20939475$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Ghamkhar, K</creatorcontrib><creatorcontrib>Snowball, R</creatorcontrib><creatorcontrib>Wintle, B.J</creatorcontrib><creatorcontrib>Brown, A.H.D</creatorcontrib><title>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</title><title>Australian journal of agricultural research</title><description>Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Animal, plant and microbial ecology</subject><subject>Biological and medical sciences</subject><subject>canonical redundancy analysis</subject><subject>canonical redundancy analysis (RDA)</subject><subject>cluster analysis</subject><subject>core size</subject><subject>ecogeography</subject><subject>ecoregions</subject><subject>forage legumes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>germplasm conservation</subject><subject>GIS</subject><subject>MSTRAT</subject><subject>plant ecology</subject><subject>plant morphology</subject><subject>sampling</subject><subject>sampling strategy</subject><subject>statistical analysis</subject><subject>Trifolium</subject><subject>Trifolium spumosum</subject><issn>0004-9409</issn><issn>1836-5795</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><recordid>eNo9kE1PwzAMhiMEEmMgfgK5IOBQcJqmbY5o4kuahMTgXLn5GEHtUiUdEmf-OBmbdrEt6_H72ibknMEtg4rd3b9BnYM8IBNW8zITlRSHZAIARSYLkMfkJMYvgLIQrJyQ38UYcDRLZyK1PlBtvk3nB7daUqTKB5NC1xk1Or-i3tK2Q61NoKrz3yld0_fgrO_cuqdxWPc-pmJ-e0PXcSNh0rBfOoUdxZWmuAw-630YPvdtjSOekiOLXTRnuzwlH48P77PnbP769DK7n2eK82rMpBBFWee1NFpLpbgWVuYCQeel5nVV5y22okVlLVMKDeelKguAvDaKCdZWfEqutroq-BiDsc0QXI_hp2HQbH7X7H6XyMstOWBMW9qAK-XiHt8gsqhE4i62nEXfpOsS87HIgXFgQkhgG0-684wu-L0Chn-j5nPs-R_y8IR2</recordid><startdate>20080101</startdate><enddate>20080101</enddate><creator>Ghamkhar, K</creator><creator>Snowball, R</creator><creator>Wintle, B.J</creator><creator>Brown, A.H.D</creator><general>Collingwood, Victoria: CSIRO Publishing</general><general>Commonwealth Scientific and Industrial Research Organization</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20080101</creationdate><title>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</title><author>Ghamkhar, K ; Snowball, R ; Wintle, B.J ; Brown, A.H.D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c337t-955468289edd9cc3d5f925a0d26d38782bab5bacff1ccae336c640028ec151b73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Agronomy. Soil science and plant productions</topic><topic>Animal, plant and microbial ecology</topic><topic>Biological and medical sciences</topic><topic>canonical redundancy analysis</topic><topic>canonical redundancy analysis (RDA)</topic><topic>cluster analysis</topic><topic>core size</topic><topic>ecogeography</topic><topic>ecoregions</topic><topic>forage legumes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>germplasm conservation</topic><topic>GIS</topic><topic>MSTRAT</topic><topic>plant ecology</topic><topic>plant morphology</topic><topic>sampling</topic><topic>sampling strategy</topic><topic>statistical analysis</topic><topic>Trifolium</topic><topic>Trifolium spumosum</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ghamkhar, K</creatorcontrib><creatorcontrib>Snowball, R</creatorcontrib><creatorcontrib>Wintle, B.J</creatorcontrib><creatorcontrib>Brown, A.H.D</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><jtitle>Australian journal of agricultural research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ghamkhar, K</au><au>Snowball, R</au><au>Wintle, B.J</au><au>Brown, A.H.D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data</atitle><jtitle>Australian journal of agricultural research</jtitle><date>2008-01-01</date><risdate>2008</risdate><volume>59</volume><issue>12</issue><spage>1103</spage><epage>1112</epage><pages>1103-1112</pages><issn>0004-9409</issn><eissn>1836-5795</eissn><coden>AJAEA9</coden><abstract>Core collections are a way to improve the functioning of germplasm collections through systematic evaluation, exploitation, and improved management of the whole collection. The published sizes of cores have ranged from 10 to 30% of the collection. The first step in developing a core collection is usually stratification of the whole collection. We adopted three approaches in the process of core designation. First, the existing ecological data and newly acquired agro-morphological (evaluation) data were analysed to determine the optimal method for capturing the ecological and morphological diversity of accessions. Second, different selection strategies were compared to identify the most powerful analysis with the greatest likelihood of covering maximum diversity. Third, the correlation between the two datasets was investigated. The annual pasture legume, bladder clover ( Trifolium spumosum L.), was used for this pilot study because 80% of the existing 398 accessions have near-complete ecological data. The study found that a two-step selection process using ecological data and stratified proportional strategy followed by combined datasets and maximising strategy best represents the whole collection of T. spumosum in the core.</abstract><cop>Collingwood</cop><pub>Collingwood, Victoria: CSIRO Publishing</pub><doi>10.1071/AR08209</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 0004-9409
ispartof Australian journal of agricultural research, 2008-01, Vol.59 (12), p.1103-1112
issn 0004-9409
1836-5795
language eng
recordid cdi_crossref_primary_10_1071_AR08209
source CSIRO Publishing Journals
subjects Agronomy. Soil science and plant productions
Animal, plant and microbial ecology
Biological and medical sciences
canonical redundancy analysis
canonical redundancy analysis (RDA)
cluster analysis
core size
ecogeography
ecoregions
forage legumes
Fundamental and applied biological sciences. Psychology
germplasm conservation
GIS
MSTRAT
plant ecology
plant morphology
sampling
sampling strategy
statistical analysis
Trifolium
Trifolium spumosum
title Strategies for developing a core collection of bladder clover ( Trifolium spumosum L.) using ecological and agro-morphological data
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-16T20%3A21%3A29IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-fao_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Strategies%20for%20developing%20a%20core%20collection%20of%20bladder%20clover%20(%20Trifolium%20spumosum%20L.)%20using%20ecological%20and%20agro-morphological%20data&rft.jtitle=Australian%20journal%20of%20agricultural%20research&rft.au=Ghamkhar,%20K&rft.date=2008-01-01&rft.volume=59&rft.issue=12&rft.spage=1103&rft.epage=1112&rft.pages=1103-1112&rft.issn=0004-9409&rft.eissn=1836-5795&rft.coden=AJAEA9&rft_id=info:doi/10.1071/AR08209&rft_dat=%3Cfao_cross%3EUS201301559017%3C/fao_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true