Strain-based design, direct macrocyclization, and metal complexation of thiazole-containing calix[3]pyrrole analogues
The coordination chemistry of ring-contracted porphyrinoids, such as subporphyrins and calix[3]pyrroles, has been largely unexplored owing to the synthetic difficulty of their free-base analogues. Here, we report strain-based molecular design and high-yield synthesis of thiazole-containing calix[3]p...
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creator | Watanabe, Keita Shibata, Kotaro Ichino, Tomoya Ide, Yuki Yoneda, Tomoki Maeda, Satoshi Inokuma, Yasuhide |
description | The coordination chemistry of ring-contracted porphyrinoids, such as subporphyrins and calix[3]pyrroles, has been largely unexplored owing to the synthetic difficulty of their free-base analogues. Here, we report strain-based molecular design and high-yield synthesis of thiazole-containing calix[3]pyrrole analogues for metal complexation. The artificial force induced reaction and StrainViz analysis methods were used to perform a conformational search and evaluate/visualize the ring strain. The results indicated that the thiazole-containing analogues are less strained than the parent calix[3]pyrrole, while incorporation of imidazole or oxazole unexpectedly leads to an increase in the total strain. Calix[1]furan[2]thiazole was obtained in 60% yield by the direct macrocyclization between α-bromoketone and bis(thioamide), whereas the
meso
-N(sp
2
)-bridged analogue, which was calculated to be 5.1 kcal mol
−1
more strained, was only obtained in a 2% yield. Calix[1]furan[2]thiazole was converted to calix[1]pyrrole[2]thiazole to investigate metal complexation. Through the reaction with Et
2
Zn, calix[1]pyrrole[2]thiazole bound a Zn(
ii
) ion in a tridentate fashion adopting a cone conformation, giving a water/air stable organozinc complex that catalyzes polymerization of lactide. Conversely, Ag(
i
) and Pd(
ii
) ions coordinated to the partial cone conformation of calix[1]pyrrole[2]thiazole in a bidentate fashion. Strain-based molecular design expands the synthetic access to contracted porphyrinoids and provides the opportunity to take advantage of their rich coordination chemistry.
AFIR- and StrainViz-based evaluation of macrocyclic ring strain allowed rational design and high-yield synthesis of calix[3]pyrrole analogues. Among them, calix[1]pyrrole[2]thiazole afforded various metal complexes including water-stable organozinc. |
doi_str_mv | 10.1039/d4qi00684d |
format | Article |
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meso
-N(sp
2
)-bridged analogue, which was calculated to be 5.1 kcal mol
−1
more strained, was only obtained in a 2% yield. Calix[1]furan[2]thiazole was converted to calix[1]pyrrole[2]thiazole to investigate metal complexation. Through the reaction with Et
2
Zn, calix[1]pyrrole[2]thiazole bound a Zn(
ii
) ion in a tridentate fashion adopting a cone conformation, giving a water/air stable organozinc complex that catalyzes polymerization of lactide. Conversely, Ag(
i
) and Pd(
ii
) ions coordinated to the partial cone conformation of calix[1]pyrrole[2]thiazole in a bidentate fashion. Strain-based molecular design expands the synthetic access to contracted porphyrinoids and provides the opportunity to take advantage of their rich coordination chemistry.
AFIR- and StrainViz-based evaluation of macrocyclic ring strain allowed rational design and high-yield synthesis of calix[3]pyrrole analogues. Among them, calix[1]pyrrole[2]thiazole afforded various metal complexes including water-stable organozinc.</description><identifier>ISSN: 2052-1553</identifier><identifier>ISSN: 2052-1545</identifier><identifier>EISSN: 2052-1553</identifier><identifier>DOI: 10.1039/d4qi00684d</identifier><language>eng</language><publisher>London: Royal Society of Chemistry</publisher><subject>Chemical synthesis ; Complexation ; Coordination ; Imidazole ; Oxazole ; Palladium ; Pyrroles</subject><ispartof>Inorganic chemistry frontiers, 2024-06, Vol.11 (12), p.3548-3554</ispartof><rights>Copyright Royal Society of Chemistry 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c276t-ba636b7cecd2f6641dabcc39deb6f0464117d684c21d11f34de5587261cbed553</cites><orcidid>0000-0003-0648-0503 ; 0000-0001-8822-1147 ; 0000-0002-9804-0240 ; 0000-0001-6558-3356</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids></links><search><creatorcontrib>Watanabe, Keita</creatorcontrib><creatorcontrib>Shibata, Kotaro</creatorcontrib><creatorcontrib>Ichino, Tomoya</creatorcontrib><creatorcontrib>Ide, Yuki</creatorcontrib><creatorcontrib>Yoneda, Tomoki</creatorcontrib><creatorcontrib>Maeda, Satoshi</creatorcontrib><creatorcontrib>Inokuma, Yasuhide</creatorcontrib><title>Strain-based design, direct macrocyclization, and metal complexation of thiazole-containing calix[3]pyrrole analogues</title><title>Inorganic chemistry frontiers</title><description>The coordination chemistry of ring-contracted porphyrinoids, such as subporphyrins and calix[3]pyrroles, has been largely unexplored owing to the synthetic difficulty of their free-base analogues. Here, we report strain-based molecular design and high-yield synthesis of thiazole-containing calix[3]pyrrole analogues for metal complexation. The artificial force induced reaction and StrainViz analysis methods were used to perform a conformational search and evaluate/visualize the ring strain. The results indicated that the thiazole-containing analogues are less strained than the parent calix[3]pyrrole, while incorporation of imidazole or oxazole unexpectedly leads to an increase in the total strain. Calix[1]furan[2]thiazole was obtained in 60% yield by the direct macrocyclization between α-bromoketone and bis(thioamide), whereas the
meso
-N(sp
2
)-bridged analogue, which was calculated to be 5.1 kcal mol
−1
more strained, was only obtained in a 2% yield. Calix[1]furan[2]thiazole was converted to calix[1]pyrrole[2]thiazole to investigate metal complexation. Through the reaction with Et
2
Zn, calix[1]pyrrole[2]thiazole bound a Zn(
ii
) ion in a tridentate fashion adopting a cone conformation, giving a water/air stable organozinc complex that catalyzes polymerization of lactide. Conversely, Ag(
i
) and Pd(
ii
) ions coordinated to the partial cone conformation of calix[1]pyrrole[2]thiazole in a bidentate fashion. Strain-based molecular design expands the synthetic access to contracted porphyrinoids and provides the opportunity to take advantage of their rich coordination chemistry.
AFIR- and StrainViz-based evaluation of macrocyclic ring strain allowed rational design and high-yield synthesis of calix[3]pyrrole analogues. Among them, calix[1]pyrrole[2]thiazole afforded various metal complexes including water-stable organozinc.</description><subject>Chemical synthesis</subject><subject>Complexation</subject><subject>Coordination</subject><subject>Imidazole</subject><subject>Oxazole</subject><subject>Palladium</subject><subject>Pyrroles</subject><issn>2052-1553</issn><issn>2052-1545</issn><issn>2052-1553</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNpNkMtLAzEQxoMoWGov3oWAN3E1r822R2l9FAoi6klkySbZmpLdbJMU2v71pq2opxlmfvP4PgDOMbrBiI5uFVsahPiQqSPQIygnGc5zevwvPwWDEBYIIYwZwhz1wOo1emHarBJBK6h0MPP2GirjtYywEdI7uZHWbEU0LjVEq2Cjo7BQuqazer2vQ1fD-GXE1lmdSdfGtNG0cyiFNesP-tltvE-tNC2sm690OAMntbBBD35iH7w_3L-Nn7LZ8-N0fDfLJCl4TE9xyqtCaqlIzTnDSlRS0pHSFa8RSwVcqKRXEqwwrilTOs-HBeFYVlolvX1wedjbebdMd2O5cCufvgglRZwTMmJoR10dqKQ2BK_rsvOmEX5TYlTunC0n7GW6d3aS4IsD7IP85f6cp9-4-Xee</recordid><startdate>20240611</startdate><enddate>20240611</enddate><creator>Watanabe, Keita</creator><creator>Shibata, Kotaro</creator><creator>Ichino, Tomoya</creator><creator>Ide, Yuki</creator><creator>Yoneda, Tomoki</creator><creator>Maeda, Satoshi</creator><creator>Inokuma, Yasuhide</creator><general>Royal Society of Chemistry</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><orcidid>https://orcid.org/0000-0003-0648-0503</orcidid><orcidid>https://orcid.org/0000-0001-8822-1147</orcidid><orcidid>https://orcid.org/0000-0002-9804-0240</orcidid><orcidid>https://orcid.org/0000-0001-6558-3356</orcidid></search><sort><creationdate>20240611</creationdate><title>Strain-based design, direct macrocyclization, and metal complexation of thiazole-containing calix[3]pyrrole analogues</title><author>Watanabe, Keita ; Shibata, Kotaro ; Ichino, Tomoya ; Ide, Yuki ; Yoneda, Tomoki ; Maeda, Satoshi ; Inokuma, Yasuhide</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c276t-ba636b7cecd2f6641dabcc39deb6f0464117d684c21d11f34de5587261cbed553</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Chemical synthesis</topic><topic>Complexation</topic><topic>Coordination</topic><topic>Imidazole</topic><topic>Oxazole</topic><topic>Palladium</topic><topic>Pyrroles</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Watanabe, Keita</creatorcontrib><creatorcontrib>Shibata, Kotaro</creatorcontrib><creatorcontrib>Ichino, Tomoya</creatorcontrib><creatorcontrib>Ide, Yuki</creatorcontrib><creatorcontrib>Yoneda, Tomoki</creatorcontrib><creatorcontrib>Maeda, Satoshi</creatorcontrib><creatorcontrib>Inokuma, Yasuhide</creatorcontrib><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><jtitle>Inorganic chemistry frontiers</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Watanabe, Keita</au><au>Shibata, Kotaro</au><au>Ichino, Tomoya</au><au>Ide, Yuki</au><au>Yoneda, Tomoki</au><au>Maeda, Satoshi</au><au>Inokuma, Yasuhide</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Strain-based design, direct macrocyclization, and metal complexation of thiazole-containing calix[3]pyrrole analogues</atitle><jtitle>Inorganic chemistry frontiers</jtitle><date>2024-06-11</date><risdate>2024</risdate><volume>11</volume><issue>12</issue><spage>3548</spage><epage>3554</epage><pages>3548-3554</pages><issn>2052-1553</issn><issn>2052-1545</issn><eissn>2052-1553</eissn><abstract>The coordination chemistry of ring-contracted porphyrinoids, such as subporphyrins and calix[3]pyrroles, has been largely unexplored owing to the synthetic difficulty of their free-base analogues. Here, we report strain-based molecular design and high-yield synthesis of thiazole-containing calix[3]pyrrole analogues for metal complexation. The artificial force induced reaction and StrainViz analysis methods were used to perform a conformational search and evaluate/visualize the ring strain. The results indicated that the thiazole-containing analogues are less strained than the parent calix[3]pyrrole, while incorporation of imidazole or oxazole unexpectedly leads to an increase in the total strain. Calix[1]furan[2]thiazole was obtained in 60% yield by the direct macrocyclization between α-bromoketone and bis(thioamide), whereas the
meso
-N(sp
2
)-bridged analogue, which was calculated to be 5.1 kcal mol
−1
more strained, was only obtained in a 2% yield. Calix[1]furan[2]thiazole was converted to calix[1]pyrrole[2]thiazole to investigate metal complexation. Through the reaction with Et
2
Zn, calix[1]pyrrole[2]thiazole bound a Zn(
ii
) ion in a tridentate fashion adopting a cone conformation, giving a water/air stable organozinc complex that catalyzes polymerization of lactide. Conversely, Ag(
i
) and Pd(
ii
) ions coordinated to the partial cone conformation of calix[1]pyrrole[2]thiazole in a bidentate fashion. Strain-based molecular design expands the synthetic access to contracted porphyrinoids and provides the opportunity to take advantage of their rich coordination chemistry.
AFIR- and StrainViz-based evaluation of macrocyclic ring strain allowed rational design and high-yield synthesis of calix[3]pyrrole analogues. Among them, calix[1]pyrrole[2]thiazole afforded various metal complexes including water-stable organozinc.</abstract><cop>London</cop><pub>Royal Society of Chemistry</pub><doi>10.1039/d4qi00684d</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0003-0648-0503</orcidid><orcidid>https://orcid.org/0000-0001-8822-1147</orcidid><orcidid>https://orcid.org/0000-0002-9804-0240</orcidid><orcidid>https://orcid.org/0000-0001-6558-3356</orcidid><oa>free_for_read</oa></addata></record> |
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source | Royal Society Of Chemistry Journals 2008- |
subjects | Chemical synthesis Complexation Coordination Imidazole Oxazole Palladium Pyrroles |
title | Strain-based design, direct macrocyclization, and metal complexation of thiazole-containing calix[3]pyrrole analogues |
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