Structural features localizing the ferroptosis inhibitor GIF-2197-r to lysosomes
We previously reported that N , N -dimethylaniline derivatives are potent ferroptosis inhibitors. Among them, the novel aminoindan derivative GIF-2197-r (the racemate of GIF-2115 (R-form) and GIF-2196 (S-form)) is effective at a concentration of 0.01 μM due to its localization to lysosomes and ferro...
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creator | Hirata, Yoko Hashimoto, Tomohiro Ando, Kaori Kamatari, Yuji O Takemori, Hiroshi Furuta, Kyoji |
description | We previously reported that
N
,
N
-dimethylaniline derivatives are potent ferroptosis inhibitors. Among them, the novel aminoindan derivative GIF-2197-r (the racemate of GIF-2115 (R-form) and GIF-2196 (S-form)) is effective at a concentration of 0.01 μM due to its localization to lysosomes and ferrous ion coordination capacity. The current study demonstrates that the aliphatic tertiary amine moiety of GIF-2197-r is responsible for lysosomal localization. Although
N
,
N
-dimethylaniline derivatives cannot form chelate structures with Fe
2+
, density functional theory computation demonstrates that they can form stable monodentate complexes with a hydrated ferrous ion, likely due to the highly electron-rich nature of the (dialkylamino)phenyl ring. Furthermore, the results suggest that the aliphatic tertiary amine moiety contributes to stabilizing the complexation. These findings could prove useful for developing improved lysosomotropic ferroptosis inhibitors for neurodegenerative diseases.
Structural features of
N
,
N
-dimethylaniline derivatives as potent ferroptosis inhibitors:lysosomal localization and stabilization of ferrous ion complexation. |
doi_str_mv | 10.1039/d3ra06611h |
format | Article |
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N
,
N
-dimethylaniline derivatives are potent ferroptosis inhibitors. Among them, the novel aminoindan derivative GIF-2197-r (the racemate of GIF-2115 (R-form) and GIF-2196 (S-form)) is effective at a concentration of 0.01 μM due to its localization to lysosomes and ferrous ion coordination capacity. The current study demonstrates that the aliphatic tertiary amine moiety of GIF-2197-r is responsible for lysosomal localization. Although
N
,
N
-dimethylaniline derivatives cannot form chelate structures with Fe
2+
, density functional theory computation demonstrates that they can form stable monodentate complexes with a hydrated ferrous ion, likely due to the highly electron-rich nature of the (dialkylamino)phenyl ring. Furthermore, the results suggest that the aliphatic tertiary amine moiety contributes to stabilizing the complexation. These findings could prove useful for developing improved lysosomotropic ferroptosis inhibitors for neurodegenerative diseases.
Structural features of
N
,
N
-dimethylaniline derivatives as potent ferroptosis inhibitors:lysosomal localization and stabilization of ferrous ion complexation.</description><identifier>ISSN: 2046-2069</identifier><identifier>EISSN: 2046-2069</identifier><identifier>DOI: 10.1039/d3ra06611h</identifier><language>eng</language><publisher>Cambridge: Royal Society of Chemistry</publisher><subject>Aliphatic compounds ; Chemistry ; Density functional theory ; Ferrous ions ; Inhibitors ; Localization ; Lysosomes</subject><ispartof>RSC advances, 2023-11, Vol.13 (46), p.32276-32281</ispartof><rights>Copyright Royal Society of Chemistry 2023</rights><rights>This journal is © The Royal Society of Chemistry 2023 The Royal Society of Chemistry</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-9ec4a3225524142cb74abcbb77ceb9bea664d94b851454f204ac1b48b3e818973</citedby><cites>FETCH-LOGICAL-c406t-9ec4a3225524142cb74abcbb77ceb9bea664d94b851454f204ac1b48b3e818973</cites><orcidid>0000-0001-9573-5162 ; 0000-0002-1815-2964 ; 0000-0002-7081-4937 ; 0000-0001-5345-2754</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10620646/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10620646/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,27901,27902,53766,53768</link.rule.ids></links><search><creatorcontrib>Hirata, Yoko</creatorcontrib><creatorcontrib>Hashimoto, Tomohiro</creatorcontrib><creatorcontrib>Ando, Kaori</creatorcontrib><creatorcontrib>Kamatari, Yuji O</creatorcontrib><creatorcontrib>Takemori, Hiroshi</creatorcontrib><creatorcontrib>Furuta, Kyoji</creatorcontrib><title>Structural features localizing the ferroptosis inhibitor GIF-2197-r to lysosomes</title><title>RSC advances</title><description>We previously reported that
N
,
N
-dimethylaniline derivatives are potent ferroptosis inhibitors. Among them, the novel aminoindan derivative GIF-2197-r (the racemate of GIF-2115 (R-form) and GIF-2196 (S-form)) is effective at a concentration of 0.01 μM due to its localization to lysosomes and ferrous ion coordination capacity. The current study demonstrates that the aliphatic tertiary amine moiety of GIF-2197-r is responsible for lysosomal localization. Although
N
,
N
-dimethylaniline derivatives cannot form chelate structures with Fe
2+
, density functional theory computation demonstrates that they can form stable monodentate complexes with a hydrated ferrous ion, likely due to the highly electron-rich nature of the (dialkylamino)phenyl ring. Furthermore, the results suggest that the aliphatic tertiary amine moiety contributes to stabilizing the complexation. These findings could prove useful for developing improved lysosomotropic ferroptosis inhibitors for neurodegenerative diseases.
Structural features of
N
,
N
-dimethylaniline derivatives as potent ferroptosis inhibitors:lysosomal localization and stabilization of ferrous ion complexation.</description><subject>Aliphatic compounds</subject><subject>Chemistry</subject><subject>Density functional theory</subject><subject>Ferrous ions</subject><subject>Inhibitors</subject><subject>Localization</subject><subject>Lysosomes</subject><issn>2046-2069</issn><issn>2046-2069</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpdkdtLwzAYxYsoOOZefBcKvohQTdI0TZ9kTHeBgeLlOSRZuma0zUxSYf71xm3MS15y-PLj8J2cKDqH4AaCtLhdpJYDQiCsjqIeApgkCJDi-Jc-jQbOrUA4JIOIwF709OJtJ31neR2XigehXFwbyWv9qdtl7CsV5taatTdOu1i3lRbaGxtPZuMEwSJPbOxNXG-ccaZR7iw6KXnt1GB_96O38cPraJrMHyez0XCeSAyITwolMU8RyjKEIUZS5JgLKUSeSyUKoTgheFFgQTOIM1yGBFxCgalIFYW0yNN-dLfzXXeiUQupWh8ysLXVDbcbZrhmf19aXbGl-WAQkPAVmASHq72DNe-dcp412klV17xVpnMMUUoIgJDigF7-Q1ems23It6UoygHNAnW9o6Q1zllVHraBgH03xO7T5-G2oWmAL3awdfLA_TSYfgEUko1u</recordid><startdate>20231102</startdate><enddate>20231102</enddate><creator>Hirata, Yoko</creator><creator>Hashimoto, Tomohiro</creator><creator>Ando, Kaori</creator><creator>Kamatari, Yuji O</creator><creator>Takemori, Hiroshi</creator><creator>Furuta, Kyoji</creator><general>Royal Society of Chemistry</general><general>The Royal Society of Chemistry</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-9573-5162</orcidid><orcidid>https://orcid.org/0000-0002-1815-2964</orcidid><orcidid>https://orcid.org/0000-0002-7081-4937</orcidid><orcidid>https://orcid.org/0000-0001-5345-2754</orcidid></search><sort><creationdate>20231102</creationdate><title>Structural features localizing the ferroptosis inhibitor GIF-2197-r to lysosomes</title><author>Hirata, Yoko ; Hashimoto, Tomohiro ; Ando, Kaori ; Kamatari, Yuji O ; Takemori, Hiroshi ; Furuta, Kyoji</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-9ec4a3225524142cb74abcbb77ceb9bea664d94b851454f204ac1b48b3e818973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Aliphatic compounds</topic><topic>Chemistry</topic><topic>Density functional theory</topic><topic>Ferrous ions</topic><topic>Inhibitors</topic><topic>Localization</topic><topic>Lysosomes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hirata, Yoko</creatorcontrib><creatorcontrib>Hashimoto, Tomohiro</creatorcontrib><creatorcontrib>Ando, Kaori</creatorcontrib><creatorcontrib>Kamatari, Yuji O</creatorcontrib><creatorcontrib>Takemori, Hiroshi</creatorcontrib><creatorcontrib>Furuta, Kyoji</creatorcontrib><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>RSC advances</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hirata, Yoko</au><au>Hashimoto, Tomohiro</au><au>Ando, Kaori</au><au>Kamatari, Yuji O</au><au>Takemori, Hiroshi</au><au>Furuta, Kyoji</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structural features localizing the ferroptosis inhibitor GIF-2197-r to lysosomes</atitle><jtitle>RSC advances</jtitle><date>2023-11-02</date><risdate>2023</risdate><volume>13</volume><issue>46</issue><spage>32276</spage><epage>32281</epage><pages>32276-32281</pages><issn>2046-2069</issn><eissn>2046-2069</eissn><abstract>We previously reported that
N
,
N
-dimethylaniline derivatives are potent ferroptosis inhibitors. Among them, the novel aminoindan derivative GIF-2197-r (the racemate of GIF-2115 (R-form) and GIF-2196 (S-form)) is effective at a concentration of 0.01 μM due to its localization to lysosomes and ferrous ion coordination capacity. The current study demonstrates that the aliphatic tertiary amine moiety of GIF-2197-r is responsible for lysosomal localization. Although
N
,
N
-dimethylaniline derivatives cannot form chelate structures with Fe
2+
, density functional theory computation demonstrates that they can form stable monodentate complexes with a hydrated ferrous ion, likely due to the highly electron-rich nature of the (dialkylamino)phenyl ring. Furthermore, the results suggest that the aliphatic tertiary amine moiety contributes to stabilizing the complexation. These findings could prove useful for developing improved lysosomotropic ferroptosis inhibitors for neurodegenerative diseases.
Structural features of
N
,
N
-dimethylaniline derivatives as potent ferroptosis inhibitors:lysosomal localization and stabilization of ferrous ion complexation.</abstract><cop>Cambridge</cop><pub>Royal Society of Chemistry</pub><doi>10.1039/d3ra06611h</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0001-9573-5162</orcidid><orcidid>https://orcid.org/0000-0002-1815-2964</orcidid><orcidid>https://orcid.org/0000-0002-7081-4937</orcidid><orcidid>https://orcid.org/0000-0001-5345-2754</orcidid><oa>free_for_read</oa></addata></record> |
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source | DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; PubMed Central Open Access |
subjects | Aliphatic compounds Chemistry Density functional theory Ferrous ions Inhibitors Localization Lysosomes |
title | Structural features localizing the ferroptosis inhibitor GIF-2197-r to lysosomes |
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