STEM Footprints and Bound Mass Distributions for DNA Control Proteins

We review a current methodology which analyzes quantitative scattering data from Scanning Transmission Electron Microscopy to establish footprints—positions of DNA-binding proteins on cloned genes—and mass distributions for the bound protein. Recognition by computer of the DNA path and the extent of...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Bio/Technology 1985-06, Vol.3 (6), p.549-553
Hauptverfasser: Hough, Paul V. C, Mastrangelo, Iris A, Wall, Joseph S, Hainfeld, James F, Wilson, Van G, Ryder, Kevin, Tegtmeyer, Peter
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 553
container_issue 6
container_start_page 549
container_title Bio/Technology
container_volume 3
creator Hough, Paul V. C
Mastrangelo, Iris A
Wall, Joseph S
Hainfeld, James F
Wilson, Van G
Ryder, Kevin
Tegtmeyer, Peter
description We review a current methodology which analyzes quantitative scattering data from Scanning Transmission Electron Microscopy to establish footprints—positions of DNA-binding proteins on cloned genes—and mass distributions for the bound protein. Recognition by computer of the DNA path and the extent of the bound protein leads to an analysis rate which is high for image-based data. The methods have been applied in the study of eukaryotic transcription initiation and T antigen interaction with the SV40 control region.
doi_str_mv 10.1038/nbt0685-549
format Article
fullrecord <record><control><sourceid>nature_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1038_nbt0685_549</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>nbt0685-549</sourcerecordid><originalsourceid>FETCH-LOGICAL-c254t-4ef0c014955237e21645fa1b0b179eda1d84da05e54a6a0303309c3738a6d4b63</originalsourceid><addsrcrecordid>eNp1kLFOwzAURS0EEqUw8QNmhsCzn-0kY2lTQGoBiSKxRU7ioFTFRrYz9O9J1QqxsLy7HF3ddwi5ZHDLALM7W0VQmUykyI_IiCOyBFUmjskIUsSEc_5xSs5CWAOIVHExIsXbqljSuXPx23c2BqptQ-9dP9ylDoHOuhB9V_WxczbQ1nk6e57QqbPRuw199S6azoZzctLqTTAXhxyT93mxmj4mi5eHp-lkkdRcipgI00INTORSckwNZ0rIVrMKKpbmptGsyUSjQRoptNKAgAh5jSlmWjWiUjgm1_ve2rsQvGnLYfWX9tuSQbkzUB4MlIOBgb7Z02H326fx5dr13g4D_8Gv9rjVsffmt_qPVPwBRcVnaw</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>STEM Footprints and Bound Mass Distributions for DNA Control Proteins</title><source>Nature</source><source>Alma/SFX Local Collection</source><creator>Hough, Paul V. C ; Mastrangelo, Iris A ; Wall, Joseph S ; Hainfeld, James F ; Wilson, Van G ; Ryder, Kevin ; Tegtmeyer, Peter</creator><creatorcontrib>Hough, Paul V. C ; Mastrangelo, Iris A ; Wall, Joseph S ; Hainfeld, James F ; Wilson, Van G ; Ryder, Kevin ; Tegtmeyer, Peter</creatorcontrib><description>We review a current methodology which analyzes quantitative scattering data from Scanning Transmission Electron Microscopy to establish footprints—positions of DNA-binding proteins on cloned genes—and mass distributions for the bound protein. Recognition by computer of the DNA path and the extent of the bound protein leads to an analysis rate which is high for image-based data. The methods have been applied in the study of eukaryotic transcription initiation and T antigen interaction with the SV40 control region.</description><identifier>ISSN: 0733-222X</identifier><identifier>ISSN: 1087-0156</identifier><identifier>EISSN: 2331-3684</identifier><identifier>EISSN: 1546-1696</identifier><identifier>DOI: 10.1038/nbt0685-549</identifier><language>eng</language><publisher>New York: Nature Publishing Group US</publisher><subject>Agriculture ; Bioinformatics ; Biomedical and Life Sciences ; Biomedical Engineering/Biotechnology ; Biomedicine ; Biotechnology ; Life Sciences ; review-article</subject><ispartof>Bio/Technology, 1985-06, Vol.3 (6), p.549-553</ispartof><rights>Nature Publishing Company 1985</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c254t-4ef0c014955237e21645fa1b0b179eda1d84da05e54a6a0303309c3738a6d4b63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,2727,27924,27925</link.rule.ids></links><search><creatorcontrib>Hough, Paul V. C</creatorcontrib><creatorcontrib>Mastrangelo, Iris A</creatorcontrib><creatorcontrib>Wall, Joseph S</creatorcontrib><creatorcontrib>Hainfeld, James F</creatorcontrib><creatorcontrib>Wilson, Van G</creatorcontrib><creatorcontrib>Ryder, Kevin</creatorcontrib><creatorcontrib>Tegtmeyer, Peter</creatorcontrib><title>STEM Footprints and Bound Mass Distributions for DNA Control Proteins</title><title>Bio/Technology</title><addtitle>Nat Biotechnol</addtitle><description>We review a current methodology which analyzes quantitative scattering data from Scanning Transmission Electron Microscopy to establish footprints—positions of DNA-binding proteins on cloned genes—and mass distributions for the bound protein. Recognition by computer of the DNA path and the extent of the bound protein leads to an analysis rate which is high for image-based data. The methods have been applied in the study of eukaryotic transcription initiation and T antigen interaction with the SV40 control region.</description><subject>Agriculture</subject><subject>Bioinformatics</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedical Engineering/Biotechnology</subject><subject>Biomedicine</subject><subject>Biotechnology</subject><subject>Life Sciences</subject><subject>review-article</subject><issn>0733-222X</issn><issn>1087-0156</issn><issn>2331-3684</issn><issn>1546-1696</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1985</creationdate><recordtype>article</recordtype><recordid>eNp1kLFOwzAURS0EEqUw8QNmhsCzn-0kY2lTQGoBiSKxRU7ioFTFRrYz9O9J1QqxsLy7HF3ddwi5ZHDLALM7W0VQmUykyI_IiCOyBFUmjskIUsSEc_5xSs5CWAOIVHExIsXbqljSuXPx23c2BqptQ-9dP9ylDoHOuhB9V_WxczbQ1nk6e57QqbPRuw199S6azoZzctLqTTAXhxyT93mxmj4mi5eHp-lkkdRcipgI00INTORSckwNZ0rIVrMKKpbmptGsyUSjQRoptNKAgAh5jSlmWjWiUjgm1_ve2rsQvGnLYfWX9tuSQbkzUB4MlIOBgb7Z02H326fx5dr13g4D_8Gv9rjVsffmt_qPVPwBRcVnaw</recordid><startdate>19850601</startdate><enddate>19850601</enddate><creator>Hough, Paul V. C</creator><creator>Mastrangelo, Iris A</creator><creator>Wall, Joseph S</creator><creator>Hainfeld, James F</creator><creator>Wilson, Van G</creator><creator>Ryder, Kevin</creator><creator>Tegtmeyer, Peter</creator><general>Nature Publishing Group US</general><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>19850601</creationdate><title>STEM Footprints and Bound Mass Distributions for DNA Control Proteins</title><author>Hough, Paul V. C ; Mastrangelo, Iris A ; Wall, Joseph S ; Hainfeld, James F ; Wilson, Van G ; Ryder, Kevin ; Tegtmeyer, Peter</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c254t-4ef0c014955237e21645fa1b0b179eda1d84da05e54a6a0303309c3738a6d4b63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1985</creationdate><topic>Agriculture</topic><topic>Bioinformatics</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedical Engineering/Biotechnology</topic><topic>Biomedicine</topic><topic>Biotechnology</topic><topic>Life Sciences</topic><topic>review-article</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hough, Paul V. C</creatorcontrib><creatorcontrib>Mastrangelo, Iris A</creatorcontrib><creatorcontrib>Wall, Joseph S</creatorcontrib><creatorcontrib>Hainfeld, James F</creatorcontrib><creatorcontrib>Wilson, Van G</creatorcontrib><creatorcontrib>Ryder, Kevin</creatorcontrib><creatorcontrib>Tegtmeyer, Peter</creatorcontrib><collection>CrossRef</collection><jtitle>Bio/Technology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hough, Paul V. C</au><au>Mastrangelo, Iris A</au><au>Wall, Joseph S</au><au>Hainfeld, James F</au><au>Wilson, Van G</au><au>Ryder, Kevin</au><au>Tegtmeyer, Peter</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>STEM Footprints and Bound Mass Distributions for DNA Control Proteins</atitle><jtitle>Bio/Technology</jtitle><stitle>Nat Biotechnol</stitle><date>1985-06-01</date><risdate>1985</risdate><volume>3</volume><issue>6</issue><spage>549</spage><epage>553</epage><pages>549-553</pages><issn>0733-222X</issn><issn>1087-0156</issn><eissn>2331-3684</eissn><eissn>1546-1696</eissn><abstract>We review a current methodology which analyzes quantitative scattering data from Scanning Transmission Electron Microscopy to establish footprints—positions of DNA-binding proteins on cloned genes—and mass distributions for the bound protein. Recognition by computer of the DNA path and the extent of the bound protein leads to an analysis rate which is high for image-based data. The methods have been applied in the study of eukaryotic transcription initiation and T antigen interaction with the SV40 control region.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><doi>10.1038/nbt0685-549</doi><tpages>5</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0733-222X
ispartof Bio/Technology, 1985-06, Vol.3 (6), p.549-553
issn 0733-222X
1087-0156
2331-3684
1546-1696
language eng
recordid cdi_crossref_primary_10_1038_nbt0685_549
source Nature; Alma/SFX Local Collection
subjects Agriculture
Bioinformatics
Biomedical and Life Sciences
Biomedical Engineering/Biotechnology
Biomedicine
Biotechnology
Life Sciences
review-article
title STEM Footprints and Bound Mass Distributions for DNA Control Proteins
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-21T10%3A55%3A26IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-nature_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=STEM%20Footprints%20and%20Bound%20Mass%20Distributions%20for%20DNA%20Control%20Proteins&rft.jtitle=Bio/Technology&rft.au=Hough,%20Paul%20V.%20C&rft.date=1985-06-01&rft.volume=3&rft.issue=6&rft.spage=549&rft.epage=553&rft.pages=549-553&rft.issn=0733-222X&rft.eissn=2331-3684&rft_id=info:doi/10.1038/nbt0685-549&rft_dat=%3Cnature_cross%3Enbt0685-549%3C/nature_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true