Polymerase chain reaction detection of S and Z alpha-1-antitrypsin variants by duplex PCR assay
A polymerase chain reaction (PCR) assay was used to detect the two most common alpha-1-antitrypsin (A1AT) deficiency variants, S and Z. By co-amplification using primers for both the S and Z mutations, we were able to detect heterozygous and homozygous genotypes for both mutations and normal type M...
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Veröffentlicht in: | Molecular and cellular probes 1999-10, Vol.13 (5), p.389-391 |
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description | A polymerase chain reaction (PCR) assay was used to detect the two most common alpha-1-antitrypsin (A1AT) deficiency variants, S and Z. By co-amplification using primers for both the S and Z mutations, we were able to detect heterozygous and homozygous genotypes for both mutations and normal type M in a single duplex reaction. We validated our assay by comparison with phenotype studies obtained by the standard isoelectrofocusing technique. |
doi_str_mv | 10.1006/mcpr.1999.0264 |
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By co-amplification using primers for both the S and Z mutations, we were able to detect heterozygous and homozygous genotypes for both mutations and normal type M in a single duplex reaction. We validated our assay by comparison with phenotype studies obtained by the standard isoelectrofocusing technique.</description><identifier>ISSN: 0890-8508</identifier><identifier>EISSN: 1096-1194</identifier><identifier>DOI: 10.1006/mcpr.1999.0264</identifier><identifier>PMID: 10508561</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Alleles ; alpha 1-Antitrypsin - genetics ; alpha 1-Antitrypsin Deficiency - blood ; alpha 1-Antitrypsin Deficiency - diagnosis ; alpha 1-Antitrypsin Deficiency - genetics ; Base Sequence ; Genetic Testing ; Genetic Variation ; Genotype ; Humans ; Mutagenesis, Site-Directed ; Mutation ; Polymerase Chain Reaction - methods ; Serine Proteinase Inhibitors - genetics ; α1-antitrypsin (A1AT) deficiency, S and Z deficiency alleles, polymerase chain reaction (PCR), duplex reaction</subject><ispartof>Molecular and cellular probes, 1999-10, Vol.13 (5), p.389-391</ispartof><rights>1999 Academic Press</rights><rights>Copyright 1999 Academic Press.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c340t-8372f19e3dd14a6ce44b9963306dc5fdb58b3bf8d55f93466811429dfe5e31053</citedby><cites>FETCH-LOGICAL-c340t-8372f19e3dd14a6ce44b9963306dc5fdb58b3bf8d55f93466811429dfe5e31053</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0890850899902645$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10508561$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lucotte, G</creatorcontrib><creatorcontrib>Sesboüé, R</creatorcontrib><title>Polymerase chain reaction detection of S and Z alpha-1-antitrypsin variants by duplex PCR assay</title><title>Molecular and cellular probes</title><addtitle>Mol Cell Probes</addtitle><description>A polymerase chain reaction (PCR) assay was used to detect the two most common alpha-1-antitrypsin (A1AT) deficiency variants, S and Z. By co-amplification using primers for both the S and Z mutations, we were able to detect heterozygous and homozygous genotypes for both mutations and normal type M in a single duplex reaction. We validated our assay by comparison with phenotype studies obtained by the standard isoelectrofocusing technique.</description><subject>Alleles</subject><subject>alpha 1-Antitrypsin - genetics</subject><subject>alpha 1-Antitrypsin Deficiency - blood</subject><subject>alpha 1-Antitrypsin Deficiency - diagnosis</subject><subject>alpha 1-Antitrypsin Deficiency - genetics</subject><subject>Base Sequence</subject><subject>Genetic Testing</subject><subject>Genetic Variation</subject><subject>Genotype</subject><subject>Humans</subject><subject>Mutagenesis, Site-Directed</subject><subject>Mutation</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Serine Proteinase Inhibitors - genetics</subject><subject>α1-antitrypsin (A1AT) deficiency, S and Z deficiency alleles, polymerase chain reaction (PCR), duplex reaction</subject><issn>0890-8508</issn><issn>1096-1194</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kEtLxDAUhYMozji6dSn5A63JJI3JUgZfIDj42LgJaXLLRPoi6Qz235tSF25c3QfnHO79ELqkJKeEiOvG9iGnSqmcrAU_QktKlMgoVfwYLYlUJJMFkQt0FuMXIURxIk_RgpK0LARdIr3t6rGBYCJguzO-xQGMHXzXYgcDzF1X4TdsWoc_san7ncloZtrBD2HsY3IcTPBpjrgcsdv3NXzj7eYVmxjNeI5OKlNHuPitK_Rxf_e-ecyeXx6eNrfPmWWcDJlkN-uKKmDOUW6EBc5LpQRjRDhbVK4sZMnKSrqiqBTjQkhK-Vq5Cgpg6Ru2Qvmca0MXY4BK98E3JoyaEj2R0hMpPZHSE6lkuJoN_b5swP2Rz2iSQM4CSGcfPAQdrYfWgvMhcdGu8_9l_wAuTXgO</recordid><startdate>19991001</startdate><enddate>19991001</enddate><creator>Lucotte, G</creator><creator>Sesboüé, R</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>19991001</creationdate><title>Polymerase chain reaction detection of S and Z alpha-1-antitrypsin variants by duplex PCR assay</title><author>Lucotte, G ; Sesboüé, R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c340t-8372f19e3dd14a6ce44b9963306dc5fdb58b3bf8d55f93466811429dfe5e31053</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Alleles</topic><topic>alpha 1-Antitrypsin - genetics</topic><topic>alpha 1-Antitrypsin Deficiency - blood</topic><topic>alpha 1-Antitrypsin Deficiency - diagnosis</topic><topic>alpha 1-Antitrypsin Deficiency - genetics</topic><topic>Base Sequence</topic><topic>Genetic Testing</topic><topic>Genetic Variation</topic><topic>Genotype</topic><topic>Humans</topic><topic>Mutagenesis, Site-Directed</topic><topic>Mutation</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Serine Proteinase Inhibitors - genetics</topic><topic>α1-antitrypsin (A1AT) deficiency, S and Z deficiency alleles, polymerase chain reaction (PCR), duplex reaction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lucotte, G</creatorcontrib><creatorcontrib>Sesboüé, R</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><jtitle>Molecular and cellular probes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lucotte, G</au><au>Sesboüé, R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polymerase chain reaction detection of S and Z alpha-1-antitrypsin variants by duplex PCR assay</atitle><jtitle>Molecular and cellular probes</jtitle><addtitle>Mol Cell Probes</addtitle><date>1999-10-01</date><risdate>1999</risdate><volume>13</volume><issue>5</issue><spage>389</spage><epage>391</epage><pages>389-391</pages><issn>0890-8508</issn><eissn>1096-1194</eissn><abstract>A polymerase chain reaction (PCR) assay was used to detect the two most common alpha-1-antitrypsin (A1AT) deficiency variants, S and Z. By co-amplification using primers for both the S and Z mutations, we were able to detect heterozygous and homozygous genotypes for both mutations and normal type M in a single duplex reaction. We validated our assay by comparison with phenotype studies obtained by the standard isoelectrofocusing technique.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>10508561</pmid><doi>10.1006/mcpr.1999.0264</doi><tpages>3</tpages></addata></record> |
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subjects | Alleles alpha 1-Antitrypsin - genetics alpha 1-Antitrypsin Deficiency - blood alpha 1-Antitrypsin Deficiency - diagnosis alpha 1-Antitrypsin Deficiency - genetics Base Sequence Genetic Testing Genetic Variation Genotype Humans Mutagenesis, Site-Directed Mutation Polymerase Chain Reaction - methods Serine Proteinase Inhibitors - genetics α1-antitrypsin (A1AT) deficiency, S and Z deficiency alleles, polymerase chain reaction (PCR), duplex reaction |
title | Polymerase chain reaction detection of S and Z alpha-1-antitrypsin variants by duplex PCR assay |
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