Characterization of a Temperature-Sensitive Mutant of a Ubiquitin-Conjugating Enzyme and Its Use as a Heat-Inducible Degradation Signal
The ubiquitin/proteasome pathway is a highly conserved mechanism of proteolysis in all eukaryotes. Ubiquitin (Ub) is conjugated to proteolytic substrates through the sequential action of ubiquitin-activating (E1/Uba) and ubiquitin-conjugating (E2/Ubc) enzymes. The mechanism of substrate recognition...
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Veröffentlicht in: | Analytical biochemistry 1999-08, Vol.272 (2), p.263-269 |
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creator | Tongaonkar, Prasad Beck, Konrad Shinde, Ujwal P. Madura, Kiran |
description | The ubiquitin/proteasome pathway is a highly conserved mechanism of proteolysis in all eukaryotes. Ubiquitin (Ub) is conjugated to proteolytic substrates through the sequential action of ubiquitin-activating (E1/Uba) and ubiquitin-conjugating (E2/Ubc) enzymes. The mechanism of substrate recognition and ubiquitination is an area of active investigation, and we have begun a site-directed mutagenesis approach to define the biochemical and biophysical properties of ubiquitin-conjugating enzymes. We have characterized a specific mutation in Ubc4 (Ubc4P62S) which was previously shown to cause a temperature-sensitive growth defect in several other Ubc's. Ubc4P62S was rapidly degraded in vivo, contributing to the loss of function. However, reconstitution experiments revealed that the catalytic activity of Ubc4P62S was reversibly inactivated at 37°C, demonstrating that the primary defect of Ubc4P62S is its inability to form a ubiquitin thioester bond at high temperature. The in vivo defect is compounded by increased susceptibility of Ubc4P62S to degradation by the ubiquitin/proteasome pathway. We have exploited the temperature-dependent degradation of the P62S mutant to destabilize an otherwise stable test protein (glutathione S-transferase). The use of this mutant may provide a useful cis-acting temperature-inducible degradation signal. |
doi_str_mv | 10.1006/abio.1999.4190 |
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Ubiquitin (Ub) is conjugated to proteolytic substrates through the sequential action of ubiquitin-activating (E1/Uba) and ubiquitin-conjugating (E2/Ubc) enzymes. The mechanism of substrate recognition and ubiquitination is an area of active investigation, and we have begun a site-directed mutagenesis approach to define the biochemical and biophysical properties of ubiquitin-conjugating enzymes. We have characterized a specific mutation in Ubc4 (Ubc4P62S) which was previously shown to cause a temperature-sensitive growth defect in several other Ubc's. Ubc4P62S was rapidly degraded in vivo, contributing to the loss of function. However, reconstitution experiments revealed that the catalytic activity of Ubc4P62S was reversibly inactivated at 37°C, demonstrating that the primary defect of Ubc4P62S is its inability to form a ubiquitin thioester bond at high temperature. The in vivo defect is compounded by increased susceptibility of Ubc4P62S to degradation by the ubiquitin/proteasome pathway. We have exploited the temperature-dependent degradation of the P62S mutant to destabilize an otherwise stable test protein (glutathione S-transferase). The use of this mutant may provide a useful cis-acting temperature-inducible degradation signal.</description><identifier>ISSN: 0003-2697</identifier><identifier>EISSN: 1096-0309</identifier><identifier>DOI: 10.1006/abio.1999.4190</identifier><identifier>PMID: 10415098</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amino Acid Substitution ; Circular Dichroism ; Cloning, Molecular - methods ; Cysteine ; Enzyme Stability ; Hot Temperature ; Kinetics ; Ligases - chemistry ; Ligases - metabolism ; Mutagenesis, Site-Directed ; Polymerase Chain Reaction - methods ; Recombinant Fusion Proteins - chemistry ; Recombinant Fusion Proteins - metabolism ; Saccharomyces cerevisiae ; Thermodynamics ; Ubiquitin-Conjugating Enzymes</subject><ispartof>Analytical biochemistry, 1999-08, Vol.272 (2), p.263-269</ispartof><rights>1999 Academic Press</rights><rights>Copyright 1999 Academic Press.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c340t-66eb4f4af4a0ca26d7a126bb362888b99c7fd118d2b16e8ad73e91137c02bd0e3</citedby><cites>FETCH-LOGICAL-c340t-66eb4f4af4a0ca26d7a126bb362888b99c7fd118d2b16e8ad73e91137c02bd0e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0003269799941908$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10415098$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tongaonkar, Prasad</creatorcontrib><creatorcontrib>Beck, Konrad</creatorcontrib><creatorcontrib>Shinde, Ujwal P.</creatorcontrib><creatorcontrib>Madura, Kiran</creatorcontrib><title>Characterization of a Temperature-Sensitive Mutant of a Ubiquitin-Conjugating Enzyme and Its Use as a Heat-Inducible Degradation Signal</title><title>Analytical biochemistry</title><addtitle>Anal Biochem</addtitle><description>The ubiquitin/proteasome pathway is a highly conserved mechanism of proteolysis in all eukaryotes. Ubiquitin (Ub) is conjugated to proteolytic substrates through the sequential action of ubiquitin-activating (E1/Uba) and ubiquitin-conjugating (E2/Ubc) enzymes. The mechanism of substrate recognition and ubiquitination is an area of active investigation, and we have begun a site-directed mutagenesis approach to define the biochemical and biophysical properties of ubiquitin-conjugating enzymes. We have characterized a specific mutation in Ubc4 (Ubc4P62S) which was previously shown to cause a temperature-sensitive growth defect in several other Ubc's. Ubc4P62S was rapidly degraded in vivo, contributing to the loss of function. However, reconstitution experiments revealed that the catalytic activity of Ubc4P62S was reversibly inactivated at 37°C, demonstrating that the primary defect of Ubc4P62S is its inability to form a ubiquitin thioester bond at high temperature. The in vivo defect is compounded by increased susceptibility of Ubc4P62S to degradation by the ubiquitin/proteasome pathway. We have exploited the temperature-dependent degradation of the P62S mutant to destabilize an otherwise stable test protein (glutathione S-transferase). The use of this mutant may provide a useful cis-acting temperature-inducible degradation signal.</description><subject>Amino Acid Substitution</subject><subject>Circular Dichroism</subject><subject>Cloning, Molecular - methods</subject><subject>Cysteine</subject><subject>Enzyme Stability</subject><subject>Hot Temperature</subject><subject>Kinetics</subject><subject>Ligases - chemistry</subject><subject>Ligases - metabolism</subject><subject>Mutagenesis, Site-Directed</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Recombinant Fusion Proteins - chemistry</subject><subject>Recombinant Fusion Proteins - metabolism</subject><subject>Saccharomyces cerevisiae</subject><subject>Thermodynamics</subject><subject>Ubiquitin-Conjugating Enzymes</subject><issn>0003-2697</issn><issn>1096-0309</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kMtOwzAQRS0EgvLYskT-gZRxEpx4icqrEogFdB2N7Ukxap1iO0jlB_htUoUFGyRLtqxz74wOY-cCpgJAXqJ23VQopaalULDHJgKUzKAAtc8mAFBkuVTVETuO8R1AiPJKHrIjAaW4AlVP2PfsDQOaRMF9YXKd513Lkb_SekMBUx8oeyEfXXKfxJ_6hD6NxEK7j3749tms8-_9cgj7Jb_1X9s1cfSWz1Pkizi840A_EKZs7m1vnF4Rv6FlQDvOe3FLj6tTdtDiKtLZ733CFne3r7OH7PH5fj67fsxMUULKpCRdtiUOBwzm0lYocql1IfO6rrVSpmqtELXNtZBUo60KUkIUlYFcW6DihE3HXhO6GAO1zSa4NYZtI6DZGW12Rpud0WZndAhcjIFNr9dk_-CjwgGoR4CGtT8dhSYaR96QdYFMamzn_uv-AZpgh0w</recordid><startdate>19990801</startdate><enddate>19990801</enddate><creator>Tongaonkar, Prasad</creator><creator>Beck, Konrad</creator><creator>Shinde, Ujwal P.</creator><creator>Madura, Kiran</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>19990801</creationdate><title>Characterization of a Temperature-Sensitive Mutant of a Ubiquitin-Conjugating Enzyme and Its Use as a Heat-Inducible Degradation Signal</title><author>Tongaonkar, Prasad ; Beck, Konrad ; Shinde, Ujwal P. ; Madura, Kiran</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c340t-66eb4f4af4a0ca26d7a126bb362888b99c7fd118d2b16e8ad73e91137c02bd0e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Amino Acid Substitution</topic><topic>Circular Dichroism</topic><topic>Cloning, Molecular - methods</topic><topic>Cysteine</topic><topic>Enzyme Stability</topic><topic>Hot Temperature</topic><topic>Kinetics</topic><topic>Ligases - chemistry</topic><topic>Ligases - metabolism</topic><topic>Mutagenesis, Site-Directed</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Recombinant Fusion Proteins - chemistry</topic><topic>Recombinant Fusion Proteins - metabolism</topic><topic>Saccharomyces cerevisiae</topic><topic>Thermodynamics</topic><topic>Ubiquitin-Conjugating Enzymes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tongaonkar, Prasad</creatorcontrib><creatorcontrib>Beck, Konrad</creatorcontrib><creatorcontrib>Shinde, Ujwal P.</creatorcontrib><creatorcontrib>Madura, Kiran</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><jtitle>Analytical biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tongaonkar, Prasad</au><au>Beck, Konrad</au><au>Shinde, Ujwal P.</au><au>Madura, Kiran</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of a Temperature-Sensitive Mutant of a Ubiquitin-Conjugating Enzyme and Its Use as a Heat-Inducible Degradation Signal</atitle><jtitle>Analytical biochemistry</jtitle><addtitle>Anal Biochem</addtitle><date>1999-08-01</date><risdate>1999</risdate><volume>272</volume><issue>2</issue><spage>263</spage><epage>269</epage><pages>263-269</pages><issn>0003-2697</issn><eissn>1096-0309</eissn><abstract>The ubiquitin/proteasome pathway is a highly conserved mechanism of proteolysis in all eukaryotes. Ubiquitin (Ub) is conjugated to proteolytic substrates through the sequential action of ubiquitin-activating (E1/Uba) and ubiquitin-conjugating (E2/Ubc) enzymes. The mechanism of substrate recognition and ubiquitination is an area of active investigation, and we have begun a site-directed mutagenesis approach to define the biochemical and biophysical properties of ubiquitin-conjugating enzymes. We have characterized a specific mutation in Ubc4 (Ubc4P62S) which was previously shown to cause a temperature-sensitive growth defect in several other Ubc's. Ubc4P62S was rapidly degraded in vivo, contributing to the loss of function. However, reconstitution experiments revealed that the catalytic activity of Ubc4P62S was reversibly inactivated at 37°C, demonstrating that the primary defect of Ubc4P62S is its inability to form a ubiquitin thioester bond at high temperature. The in vivo defect is compounded by increased susceptibility of Ubc4P62S to degradation by the ubiquitin/proteasome pathway. We have exploited the temperature-dependent degradation of the P62S mutant to destabilize an otherwise stable test protein (glutathione S-transferase). The use of this mutant may provide a useful cis-acting temperature-inducible degradation signal.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>10415098</pmid><doi>10.1006/abio.1999.4190</doi><tpages>7</tpages></addata></record> |
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subjects | Amino Acid Substitution Circular Dichroism Cloning, Molecular - methods Cysteine Enzyme Stability Hot Temperature Kinetics Ligases - chemistry Ligases - metabolism Mutagenesis, Site-Directed Polymerase Chain Reaction - methods Recombinant Fusion Proteins - chemistry Recombinant Fusion Proteins - metabolism Saccharomyces cerevisiae Thermodynamics Ubiquitin-Conjugating Enzymes |
title | Characterization of a Temperature-Sensitive Mutant of a Ubiquitin-Conjugating Enzyme and Its Use as a Heat-Inducible Degradation Signal |
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