Generic delineation, phylogeny and subtribal affinities of Phagnalon and Aliella (Compositae, Gnaphalieae) based on nuclear and chloroplast sequences
The precise generic delimitation of Aliella and Phagnalon and their tribal affinities are at present unresolved. The main goals of our study were to verify the monophyly of these two genera and to determine their closest affinity group within Gnaphalieae. We analysed sequences of the trnL intron and...
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description | The precise generic delimitation of Aliella and Phagnalon and their tribal affinities are at present unresolved. The main goals of our study were to verify the monophyly of these two genera and to determine their closest affinity group within Gnaphalieae. We analysed sequences of the trnL intron and trnL-trnF spacer of Gnaphalieae and other Compositae tribes, in order to elucidate the tribal position of Aliella, Macowania,, Phagnalon and Philyrophyllum. In addition, we analysed ribosomal nrDNA together with the ycf3-trnS and trnT-trnL spacers of cpDNA to elucidate the relationships within Aliella and Phagnalon. The genera Anisothrix, Athrixia and Pentatrichia are closely related to Aliella and Phagnalon. Aliella, Macowania and Phagnalon are nested within the "Relhania clade", and the subtribal affinities of Philyrophyllum lie within the "crown radiation clade". The monophyly of Aliella and Phagnalon is not supported statistically and Aliella is paraphylethic in most of the analyses. The resulting phylogeny suggests an African origin for Aliella and Phagnalon and identifies three main clades in Phagnalon, the Irano-Turanian clade, the Mediterranean-Macaronesian clade and the Yemenite-Ethiopian clade. Some endemics to Yemen and Ethiopia are resolved in the Mediterranean-Macaronesian clade, providing new evidence of phytogeographical links between Macaronesia, Eastern Africa and Southern Arabia. Incongruence between the chloroplast and nuclear molecular data and the lack of resolution in some clades may indicate that hybridization could have played an important role in the evolution and diversification of Phagnalon and Aliella. |
doi_str_mv | 10.1002/tax.596002 |
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The main goals of our study were to verify the monophyly of these two genera and to determine their closest affinity group within Gnaphalieae. We analysed sequences of the trnL intron and trnL-trnF spacer of Gnaphalieae and other Compositae tribes, in order to elucidate the tribal position of Aliella, Macowania,, Phagnalon and Philyrophyllum. In addition, we analysed ribosomal nrDNA together with the ycf3-trnS and trnT-trnL spacers of cpDNA to elucidate the relationships within Aliella and Phagnalon. The genera Anisothrix, Athrixia and Pentatrichia are closely related to Aliella and Phagnalon. Aliella, Macowania and Phagnalon are nested within the "Relhania clade", and the subtribal affinities of Philyrophyllum lie within the "crown radiation clade". The monophyly of Aliella and Phagnalon is not supported statistically and Aliella is paraphylethic in most of the analyses. The resulting phylogeny suggests an African origin for Aliella and Phagnalon and identifies three main clades in Phagnalon, the Irano-Turanian clade, the Mediterranean-Macaronesian clade and the Yemenite-Ethiopian clade. Some endemics to Yemen and Ethiopia are resolved in the Mediterranean-Macaronesian clade, providing new evidence of phytogeographical links between Macaronesia, Eastern Africa and Southern Arabia. Incongruence between the chloroplast and nuclear molecular data and the lack of resolution in some clades may indicate that hybridization could have played an important role in the evolution and diversification of Phagnalon and Aliella.</description><identifier>ISSN: 0040-0262</identifier><identifier>EISSN: 1996-8175</identifier><identifier>DOI: 10.1002/tax.596002</identifier><language>eng</language><publisher>International Association for Plant Taxonomy</publisher><subject>Aliella ; Anisothrix ; Athrixia ; Bracts ; Chloroplasts ; Datasets ; ETS ; Evolution ; Genera ; Introns ; ITS ; MOLECULAR PHYLOGENETICS AND BIOGEOGRAPHY ; Pentatrichia ; Phagnalon ; Phylogenetics ; Phylogeny ; Polymerase chain reaction ; Taxa ; TrnL intron ; TrnL-trnF intergenic spacer ; TrnT-trnL ; Ycf3-trnS</subject><ispartof>Taxon, 2010-12, Vol.59 (6), p.1654-1670</ispartof><rights>2010 International Association for Plant Taxonomy</rights><rights>2010 International Association for Plant Taxonomy (IAPT) all rights reserved</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2952-667121865725717cafc92eb66b99e1052467c5b78f50d0ed07e6d9b59475f79f3</citedby><cites>FETCH-LOGICAL-c2952-667121865725717cafc92eb66b99e1052467c5b78f50d0ed07e6d9b59475f79f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/41059864$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/41059864$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,1411,27903,27904,45553,45554,57995,58228</link.rule.ids></links><search><creatorcontrib>Montes-Moreno, Noemí</creatorcontrib><creatorcontrib>Sáez, Llorenç</creatorcontrib><creatorcontrib>Benedí, Carles</creatorcontrib><creatorcontrib>Susanna, Alfonso</creatorcontrib><creatorcontrib>Garcia-Jacas, Núria</creatorcontrib><title>Generic delineation, phylogeny and subtribal affinities of Phagnalon and Aliella (Compositae, Gnaphalieae) based on nuclear and chloroplast sequences</title><title>Taxon</title><description>The precise generic delimitation of Aliella and Phagnalon and their tribal affinities are at present unresolved. The main goals of our study were to verify the monophyly of these two genera and to determine their closest affinity group within Gnaphalieae. We analysed sequences of the trnL intron and trnL-trnF spacer of Gnaphalieae and other Compositae tribes, in order to elucidate the tribal position of Aliella, Macowania,, Phagnalon and Philyrophyllum. In addition, we analysed ribosomal nrDNA together with the ycf3-trnS and trnT-trnL spacers of cpDNA to elucidate the relationships within Aliella and Phagnalon. The genera Anisothrix, Athrixia and Pentatrichia are closely related to Aliella and Phagnalon. Aliella, Macowania and Phagnalon are nested within the "Relhania clade", and the subtribal affinities of Philyrophyllum lie within the "crown radiation clade". The monophyly of Aliella and Phagnalon is not supported statistically and Aliella is paraphylethic in most of the analyses. The resulting phylogeny suggests an African origin for Aliella and Phagnalon and identifies three main clades in Phagnalon, the Irano-Turanian clade, the Mediterranean-Macaronesian clade and the Yemenite-Ethiopian clade. Some endemics to Yemen and Ethiopia are resolved in the Mediterranean-Macaronesian clade, providing new evidence of phytogeographical links between Macaronesia, Eastern Africa and Southern Arabia. Incongruence between the chloroplast and nuclear molecular data and the lack of resolution in some clades may indicate that hybridization could have played an important role in the evolution and diversification of Phagnalon and Aliella.</description><subject>Aliella</subject><subject>Anisothrix</subject><subject>Athrixia</subject><subject>Bracts</subject><subject>Chloroplasts</subject><subject>Datasets</subject><subject>ETS</subject><subject>Evolution</subject><subject>Genera</subject><subject>Introns</subject><subject>ITS</subject><subject>MOLECULAR PHYLOGENETICS AND BIOGEOGRAPHY</subject><subject>Pentatrichia</subject><subject>Phagnalon</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Taxa</subject><subject>TrnL intron</subject><subject>TrnL-trnF intergenic spacer</subject><subject>TrnT-trnL</subject><subject>Ycf3-trnS</subject><issn>0040-0262</issn><issn>1996-8175</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><recordid>eNp9kMFqGzEQhkVoIG7SS-8BHZOQTSV5JVlHYxKnYGgPKfS2zGpHtowsbaQ1qR-k75tNXHLsaX6Y7xuGn5CvnN1xxsS3Af7cSaPGeEIm3BhVzbiWn8iEsZpVTChxRj6Xsh0Brs10Qv4uMWL2lnYYfEQYfIq3tN8cQlpjPFCIHS37dsi-hUDBOR_94LHQ5OjPDawjhBTfqXnwGALQq0Xa9an4AfCWLiP0Gxg3gNe0hYIdHfG4twEhv2t2E1JOfYAy0ILPe4wWywU5dRAKfvk3z8mvh_unxWO1-rH8vpivKiuMFJVSmgs-U1ILqbm24KwR2CrVGoOcSVErbWWrZ06yjmHHNKrOtNLUWjpt3PSc3Bzv2pxKyeiaPvsd5EPDWfNWaDMW2hwLHWF-hF98wMN_yOZp_vvDuTw62zKk_OHU43NmpurpK3Gig-o</recordid><startdate>201012</startdate><enddate>201012</enddate><creator>Montes-Moreno, Noemí</creator><creator>Sáez, Llorenç</creator><creator>Benedí, Carles</creator><creator>Susanna, Alfonso</creator><creator>Garcia-Jacas, Núria</creator><general>International Association for Plant Taxonomy</general><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>201012</creationdate><title>Generic delineation, phylogeny and subtribal affinities of Phagnalon and Aliella (Compositae, Gnaphalieae) based on nuclear and chloroplast sequences</title><author>Montes-Moreno, Noemí ; Sáez, Llorenç ; Benedí, Carles ; Susanna, Alfonso ; Garcia-Jacas, Núria</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2952-667121865725717cafc92eb66b99e1052467c5b78f50d0ed07e6d9b59475f79f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Aliella</topic><topic>Anisothrix</topic><topic>Athrixia</topic><topic>Bracts</topic><topic>Chloroplasts</topic><topic>Datasets</topic><topic>ETS</topic><topic>Evolution</topic><topic>Genera</topic><topic>Introns</topic><topic>ITS</topic><topic>MOLECULAR PHYLOGENETICS AND BIOGEOGRAPHY</topic><topic>Pentatrichia</topic><topic>Phagnalon</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>Taxa</topic><topic>TrnL intron</topic><topic>TrnL-trnF intergenic spacer</topic><topic>TrnT-trnL</topic><topic>Ycf3-trnS</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Montes-Moreno, Noemí</creatorcontrib><creatorcontrib>Sáez, Llorenç</creatorcontrib><creatorcontrib>Benedí, Carles</creatorcontrib><creatorcontrib>Susanna, Alfonso</creatorcontrib><creatorcontrib>Garcia-Jacas, Núria</creatorcontrib><collection>CrossRef</collection><jtitle>Taxon</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Montes-Moreno, Noemí</au><au>Sáez, Llorenç</au><au>Benedí, Carles</au><au>Susanna, Alfonso</au><au>Garcia-Jacas, Núria</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Generic delineation, phylogeny and subtribal affinities of Phagnalon and Aliella (Compositae, Gnaphalieae) based on nuclear and chloroplast sequences</atitle><jtitle>Taxon</jtitle><date>2010-12</date><risdate>2010</risdate><volume>59</volume><issue>6</issue><spage>1654</spage><epage>1670</epage><pages>1654-1670</pages><issn>0040-0262</issn><eissn>1996-8175</eissn><abstract>The precise generic delimitation of Aliella and Phagnalon and their tribal affinities are at present unresolved. The main goals of our study were to verify the monophyly of these two genera and to determine their closest affinity group within Gnaphalieae. We analysed sequences of the trnL intron and trnL-trnF spacer of Gnaphalieae and other Compositae tribes, in order to elucidate the tribal position of Aliella, Macowania,, Phagnalon and Philyrophyllum. In addition, we analysed ribosomal nrDNA together with the ycf3-trnS and trnT-trnL spacers of cpDNA to elucidate the relationships within Aliella and Phagnalon. The genera Anisothrix, Athrixia and Pentatrichia are closely related to Aliella and Phagnalon. Aliella, Macowania and Phagnalon are nested within the "Relhania clade", and the subtribal affinities of Philyrophyllum lie within the "crown radiation clade". The monophyly of Aliella and Phagnalon is not supported statistically and Aliella is paraphylethic in most of the analyses. The resulting phylogeny suggests an African origin for Aliella and Phagnalon and identifies three main clades in Phagnalon, the Irano-Turanian clade, the Mediterranean-Macaronesian clade and the Yemenite-Ethiopian clade. Some endemics to Yemen and Ethiopia are resolved in the Mediterranean-Macaronesian clade, providing new evidence of phytogeographical links between Macaronesia, Eastern Africa and Southern Arabia. Incongruence between the chloroplast and nuclear molecular data and the lack of resolution in some clades may indicate that hybridization could have played an important role in the evolution and diversification of Phagnalon and Aliella.</abstract><pub>International Association for Plant Taxonomy</pub><doi>10.1002/tax.596002</doi><tpages>17</tpages></addata></record> |
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subjects | Aliella Anisothrix Athrixia Bracts Chloroplasts Datasets ETS Evolution Genera Introns ITS MOLECULAR PHYLOGENETICS AND BIOGEOGRAPHY Pentatrichia Phagnalon Phylogenetics Phylogeny Polymerase chain reaction Taxa TrnL intron TrnL-trnF intergenic spacer TrnT-trnL Ycf3-trnS |
title | Generic delineation, phylogeny and subtribal affinities of Phagnalon and Aliella (Compositae, Gnaphalieae) based on nuclear and chloroplast sequences |
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