Probalistic models for harmful algae: application to the Norwegian coast
We have developed probabilistic models to estimate the likelihood of harmful algae presence and outbreaks along the Norwegian coast, which can help optimization of the national monitoring program and the planning of mitigation actions. We employ support vector machines to calibrate probabilistic mod...
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creator | Silva, Edson Brajard, Julien Counillon, Francois Stephane Pettersson, Lasse H Naustvoll, Lars Johan |
description | We have developed probabilistic models to estimate the likelihood of harmful algae presence and outbreaks along the Norwegian coast, which can help optimization of the national monitoring program and the planning of mitigation actions. We employ support vector machines to calibrate probabilistic models for estimating the presence and harmful abundance (HA) of eight toxic algae found along the Norwegian coast, including Alexandrium spp., Alexandrium tamarense, Dinophysis acuta, Dinophysis acuminata, Dinophysis norvegica, Pseudo-nitzschia spp., Protoceratium reticulatum, and Azadinium spinosum. The inputs are sea surface temperature, photosynthetically active radiation, mixed layer depth, and sea surface salinity. The probabilistic models are trained with data from 2006 to 2013 and tested with data from 2014 to 2019. The presence models demonstrate good statistical performance across all taxa, with R (observed presence frequency vs. predicted probability) ranging from 0.69 to 0.98 and root mean squared error ranging from 0.84% to 7.84%. Predicting the probability of HA is more challenging, and the HA models only reach skill with four taxa (Alexandrium spp., A. tamarense, D. acuta, and A. spinosum). There are large differences in seasonal and geographical variability and sensitivity to the model input of different taxa, which are presented and discussed. The models estimate geographical regions and periods with relatively higher risk of toxic species presence and HA, and might optimize the harmful algae monitoring. The method can be extended to other regions as it relies only on remote sensing and model data as input and running national programs of toxic algae monitoring. |
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We employ support vector machines to calibrate probabilistic models for estimating the presence and harmful abundance (HA) of eight toxic algae found along the Norwegian coast, including Alexandrium spp., Alexandrium tamarense, Dinophysis acuta, Dinophysis acuminata, Dinophysis norvegica, Pseudo-nitzschia spp., Protoceratium reticulatum, and Azadinium spinosum. The inputs are sea surface temperature, photosynthetically active radiation, mixed layer depth, and sea surface salinity. The probabilistic models are trained with data from 2006 to 2013 and tested with data from 2014 to 2019. The presence models demonstrate good statistical performance across all taxa, with R (observed presence frequency vs. predicted probability) ranging from 0.69 to 0.98 and root mean squared error ranging from 0.84% to 7.84%. Predicting the probability of HA is more challenging, and the HA models only reach skill with four taxa (Alexandrium spp., A. tamarense, D. acuta, and A. spinosum). There are large differences in seasonal and geographical variability and sensitivity to the model input of different taxa, which are presented and discussed. The models estimate geographical regions and periods with relatively higher risk of toxic species presence and HA, and might optimize the harmful algae monitoring. The method can be extended to other regions as it relies only on remote sensing and model data as input and running national programs of toxic algae monitoring.</description><language>eng</language><creationdate>2024</creationdate><rights>info:eu-repo/semantics/openAccess</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,780,885,26566</link.rule.ids><linktorsrc>$$Uhttp://hdl.handle.net/11250/3137691$$EView_record_in_NORA$$FView_record_in_$$GNORA$$Hfree_for_read</linktorsrc></links><search><creatorcontrib>Silva, Edson</creatorcontrib><creatorcontrib>Brajard, Julien</creatorcontrib><creatorcontrib>Counillon, Francois Stephane</creatorcontrib><creatorcontrib>Pettersson, Lasse H</creatorcontrib><creatorcontrib>Naustvoll, Lars Johan</creatorcontrib><title>Probalistic models for harmful algae: application to the Norwegian coast</title><description>We have developed probabilistic models to estimate the likelihood of harmful algae presence and outbreaks along the Norwegian coast, which can help optimization of the national monitoring program and the planning of mitigation actions. We employ support vector machines to calibrate probabilistic models for estimating the presence and harmful abundance (HA) of eight toxic algae found along the Norwegian coast, including Alexandrium spp., Alexandrium tamarense, Dinophysis acuta, Dinophysis acuminata, Dinophysis norvegica, Pseudo-nitzschia spp., Protoceratium reticulatum, and Azadinium spinosum. The inputs are sea surface temperature, photosynthetically active radiation, mixed layer depth, and sea surface salinity. The probabilistic models are trained with data from 2006 to 2013 and tested with data from 2014 to 2019. The presence models demonstrate good statistical performance across all taxa, with R (observed presence frequency vs. predicted probability) ranging from 0.69 to 0.98 and root mean squared error ranging from 0.84% to 7.84%. Predicting the probability of HA is more challenging, and the HA models only reach skill with four taxa (Alexandrium spp., A. tamarense, D. acuta, and A. spinosum). There are large differences in seasonal and geographical variability and sensitivity to the model input of different taxa, which are presented and discussed. The models estimate geographical regions and periods with relatively higher risk of toxic species presence and HA, and might optimize the harmful algae monitoring. The method can be extended to other regions as it relies only on remote sensing and model data as input and running national programs of toxic algae monitoring.</description><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>3HK</sourceid><recordid>eNqNzDEKAjEQQNE0FqLeYTzAgjGoaLsoW4mFfRhjshuYzSyTEa8vggew-s3jz013E34g5ao5wMjPSBUSCwwoY3oRIPUYT4DTRDmgZi6gDDpEuLK8Y5-xQGCsujSzhFTj6teFWV_O97ZrgnznxRcW9NZudxvvrDvsj9b9Yz6WOzPd</recordid><startdate>2024</startdate><enddate>2024</enddate><creator>Silva, Edson</creator><creator>Brajard, Julien</creator><creator>Counillon, Francois Stephane</creator><creator>Pettersson, Lasse H</creator><creator>Naustvoll, Lars Johan</creator><scope>3HK</scope></search><sort><creationdate>2024</creationdate><title>Probalistic models for harmful algae: application to the Norwegian coast</title><author>Silva, Edson ; Brajard, Julien ; Counillon, Francois Stephane ; Pettersson, Lasse H ; Naustvoll, Lars Johan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-cristin_nora_11250_31376913</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><toplevel>online_resources</toplevel><creatorcontrib>Silva, Edson</creatorcontrib><creatorcontrib>Brajard, Julien</creatorcontrib><creatorcontrib>Counillon, Francois Stephane</creatorcontrib><creatorcontrib>Pettersson, Lasse H</creatorcontrib><creatorcontrib>Naustvoll, Lars Johan</creatorcontrib><collection>NORA - Norwegian Open Research Archives</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Silva, Edson</au><au>Brajard, Julien</au><au>Counillon, Francois Stephane</au><au>Pettersson, Lasse H</au><au>Naustvoll, Lars Johan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Probalistic models for harmful algae: application to the Norwegian coast</atitle><date>2024</date><risdate>2024</risdate><abstract>We have developed probabilistic models to estimate the likelihood of harmful algae presence and outbreaks along the Norwegian coast, which can help optimization of the national monitoring program and the planning of mitigation actions. We employ support vector machines to calibrate probabilistic models for estimating the presence and harmful abundance (HA) of eight toxic algae found along the Norwegian coast, including Alexandrium spp., Alexandrium tamarense, Dinophysis acuta, Dinophysis acuminata, Dinophysis norvegica, Pseudo-nitzschia spp., Protoceratium reticulatum, and Azadinium spinosum. The inputs are sea surface temperature, photosynthetically active radiation, mixed layer depth, and sea surface salinity. The probabilistic models are trained with data from 2006 to 2013 and tested with data from 2014 to 2019. The presence models demonstrate good statistical performance across all taxa, with R (observed presence frequency vs. predicted probability) ranging from 0.69 to 0.98 and root mean squared error ranging from 0.84% to 7.84%. Predicting the probability of HA is more challenging, and the HA models only reach skill with four taxa (Alexandrium spp., A. tamarense, D. acuta, and A. spinosum). There are large differences in seasonal and geographical variability and sensitivity to the model input of different taxa, which are presented and discussed. The models estimate geographical regions and periods with relatively higher risk of toxic species presence and HA, and might optimize the harmful algae monitoring. The method can be extended to other regions as it relies only on remote sensing and model data as input and running national programs of toxic algae monitoring.</abstract><oa>free_for_read</oa></addata></record> |
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title | Probalistic models for harmful algae: application to the Norwegian coast |
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