Feeding studies take guts – critical review and recommendations of methods for stomach contents analysis in fish
Studies on the feeding ecology of fish are essential for exploring and contrasting trophic interactions and population and community dynamics within and among aquatic ecosystems. In this respect, many different methods have been adopted for the analysis of fish stomach contents. No consensus has, ho...
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Veröffentlicht in: | Journal of fish biology 2019-12, Vol.95 (6), p.1364-1373 |
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description | Studies on the feeding ecology of fish are essential for exploring and contrasting trophic interactions and population and community dynamics within and among aquatic ecosystems. In this respect, many different methods have been adopted for the analysis of fish stomach contents. No consensus has, however, been reached for a standardised methodology despite that for several decades there has been an ongoing debate about which methodical approaches that should be preferred. Here, we critically review and scrutinise methods, addressing their strengths and weaknesses and emphasising inherent problems and possible pitfalls in their use. Although our critical assessment reveals that no completely ideal approach exists, appropriate and reliable procedures can be adopted through careful considerations and implementation. In particular, we advocate that different objectives require different methodical approaches and the choice of method should therefore be closely linked to the research questions that are addressed. For a standardisation of methods, we recommend a combination of the relative‐fullness and presence–absence methods as the optimal approach for the commonly applied feeding studies addressing relative dietary composition in terms of prey diversity and abundance. Additionally, we recommend the gravimetric method for objectives related to the quantification of food consumption rates and the numerical method for prey selection studies. DNA‐based dietary analysis provides a new and promising complementary approach to visual examination of stomach contents, although some technical challenges still exist. The suggested method standardisation facilitates comparisons across species, ecosystems and time and will enhance the applicability and benefits of fish feeding studies in trophic ecology research. |
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In this respect, many different methods have been adopted for the analysis of fish stomach contents. No consensus has, however, been reached for a standardised methodology despite that for several decades there has been an ongoing debate about which methodical approaches that should be preferred. Here, we critically review and scrutinise methods, addressing their strengths and weaknesses and emphasising inherent problems and possible pitfalls in their use. Although our critical assessment reveals that no completely ideal approach exists, appropriate and reliable procedures can be adopted through careful considerations and implementation. In particular, we advocate that different objectives require different methodical approaches and the choice of method should therefore be closely linked to the research questions that are addressed. For a standardisation of methods, we recommend a combination of the relative‐fullness and presence–absence methods as the optimal approach for the commonly applied feeding studies addressing relative dietary composition in terms of prey diversity and abundance. Additionally, we recommend the gravimetric method for objectives related to the quantification of food consumption rates and the numerical method for prey selection studies. DNA‐based dietary analysis provides a new and promising complementary approach to visual examination of stomach contents, although some technical challenges still exist. 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In this respect, many different methods have been adopted for the analysis of fish stomach contents. No consensus has, however, been reached for a standardised methodology despite that for several decades there has been an ongoing debate about which methodical approaches that should be preferred. Here, we critically review and scrutinise methods, addressing their strengths and weaknesses and emphasising inherent problems and possible pitfalls in their use. Although our critical assessment reveals that no completely ideal approach exists, appropriate and reliable procedures can be adopted through careful considerations and implementation. In particular, we advocate that different objectives require different methodical approaches and the choice of method should therefore be closely linked to the research questions that are addressed. For a standardisation of methods, we recommend a combination of the relative‐fullness and presence–absence methods as the optimal approach for the commonly applied feeding studies addressing relative dietary composition in terms of prey diversity and abundance. Additionally, we recommend the gravimetric method for objectives related to the quantification of food consumption rates and the numerical method for prey selection studies. DNA‐based dietary analysis provides a new and promising complementary approach to visual examination of stomach contents, although some technical challenges still exist. The suggested method standardisation facilitates comparisons across species, ecosystems and time and will enhance the applicability and benefits of fish feeding studies in trophic ecology research.</description><subject>Agriculture and fishery disciplines: 900</subject><subject>Animals</subject><subject>Aquatic ecosystems</subject><subject>Deoxyribonucleic acid</subject><subject>Diet</subject><subject>Diet - veterinary</subject><subject>DNA</subject><subject>Ecological monitoring</subject><subject>Ecological research</subject><subject>Ecology</subject><subject>Ecosystem</subject><subject>Ecosystems</subject><subject>Feeding</subject><subject>Fish</subject><subject>Fisheries science: 920</subject><subject>Fishes</subject><subject>Fiskerifag: 920</subject><subject>food</subject><subject>Food Chain</subject><subject>Food consumption</subject><subject>foraging</subject><subject>Gastrointestinal Contents</subject><subject>Gravimetry</subject><subject>Landbruks- og Fiskerifag: 900</subject><subject>Mathematical models</subject><subject>method standardisation</subject><subject>Methods</subject><subject>Numerical methods</subject><subject>Prey</subject><subject>prey consumption</subject><subject>Prey selection</subject><subject>Procedures</subject><subject>Stomach</subject><subject>Stomach content</subject><subject>trophic ecology</subject><subject>Trophic relationships</subject><subject>VDP</subject><issn>0022-1112</issn><issn>1095-8649</issn><issn>1095-8649</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>WIN</sourceid><sourceid>EIF</sourceid><sourceid>3HK</sourceid><recordid>eNp1kc1u1DAURi0EokNhwQuAJTZ0kdbXSex4CRXDjyp1A2vLcW46HhK72A7V7HgH3pAnwdNpWSDVG1vW0bn300fIS2CnUM7ZduxPoYEWHpEVMNVWnWjUY7JijPOqAPyIPEtpyxhTtaqfkqMa2k5JoVYkrhEH569oysvgMNFsviO9WnKif379pja67KyZaMSfDm-o8UN52jDP6AeTXfCJhpHOmDdhSHQMsYjCbOyG2uAz-uIx3ky75BJ1no4ubZ6TJ6OZEr64u4_Jt_WHr-efqovLj5_P311UtpEdVF0LKJiRktt6EEa2IOQ4CtUrKxrT1IazBrABJoXtelESYy-g_LdMGVPz-pi8PnhLiJSd1z5Eo4GxWmqQku2JtwfiOoYfC6asZ5csTpPxGJakec14I8sGUNA3_6HbsMSSbE9xgE7KVhXq5H5kSCniqK-jm03clbF6X5UuVenbqgr76s649DMO_8j7bgpwdgBu3IS7h036y_r9QfkXzt6b-g</recordid><startdate>201912</startdate><enddate>201912</enddate><creator>Amundsen, Per‐Arne</creator><creator>Sánchez‐Hernández, Javier</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><general>Wiley</general><scope>24P</scope><scope>WIN</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7SN</scope><scope>7TN</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>3HK</scope><orcidid>https://orcid.org/0000-0002-2203-8216</orcidid><orcidid>https://orcid.org/0000-0001-9684-4774</orcidid></search><sort><creationdate>201912</creationdate><title>Feeding studies take guts – critical review and recommendations of methods for stomach contents analysis in fish</title><author>Amundsen, Per‐Arne ; Sánchez‐Hernández, Javier</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4781-851e60a772c3d6a75167ff69b9c64a43a2041e41076c8b6649eb6143a509aa323</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Agriculture and fishery disciplines: 900</topic><topic>Animals</topic><topic>Aquatic ecosystems</topic><topic>Deoxyribonucleic acid</topic><topic>Diet</topic><topic>Diet - veterinary</topic><topic>DNA</topic><topic>Ecological monitoring</topic><topic>Ecological research</topic><topic>Ecology</topic><topic>Ecosystem</topic><topic>Ecosystems</topic><topic>Feeding</topic><topic>Fish</topic><topic>Fisheries science: 920</topic><topic>Fishes</topic><topic>Fiskerifag: 920</topic><topic>food</topic><topic>Food Chain</topic><topic>Food consumption</topic><topic>foraging</topic><topic>Gastrointestinal Contents</topic><topic>Gravimetry</topic><topic>Landbruks- og Fiskerifag: 900</topic><topic>Mathematical models</topic><topic>method standardisation</topic><topic>Methods</topic><topic>Numerical methods</topic><topic>Prey</topic><topic>prey consumption</topic><topic>Prey selection</topic><topic>Procedures</topic><topic>Stomach</topic><topic>Stomach content</topic><topic>trophic ecology</topic><topic>Trophic relationships</topic><topic>VDP</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Amundsen, Per‐Arne</creatorcontrib><creatorcontrib>Sánchez‐Hernández, Javier</creatorcontrib><collection>Wiley Online Library Open Access</collection><collection>Wiley Free Content</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Ecology Abstracts</collection><collection>Oceanic Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>NORA - Norwegian Open Research Archives</collection><jtitle>Journal of fish biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Amundsen, Per‐Arne</au><au>Sánchez‐Hernández, Javier</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Feeding studies take guts – critical review and recommendations of methods for stomach contents analysis in fish</atitle><jtitle>Journal of fish biology</jtitle><addtitle>J Fish Biol</addtitle><date>2019-12</date><risdate>2019</risdate><volume>95</volume><issue>6</issue><spage>1364</spage><epage>1373</epage><pages>1364-1373</pages><issn>0022-1112</issn><issn>1095-8649</issn><eissn>1095-8649</eissn><abstract>Studies on the feeding ecology of fish are essential for exploring and contrasting trophic interactions and population and community dynamics within and among aquatic ecosystems. In this respect, many different methods have been adopted for the analysis of fish stomach contents. No consensus has, however, been reached for a standardised methodology despite that for several decades there has been an ongoing debate about which methodical approaches that should be preferred. Here, we critically review and scrutinise methods, addressing their strengths and weaknesses and emphasising inherent problems and possible pitfalls in their use. Although our critical assessment reveals that no completely ideal approach exists, appropriate and reliable procedures can be adopted through careful considerations and implementation. In particular, we advocate that different objectives require different methodical approaches and the choice of method should therefore be closely linked to the research questions that are addressed. For a standardisation of methods, we recommend a combination of the relative‐fullness and presence–absence methods as the optimal approach for the commonly applied feeding studies addressing relative dietary composition in terms of prey diversity and abundance. Additionally, we recommend the gravimetric method for objectives related to the quantification of food consumption rates and the numerical method for prey selection studies. DNA‐based dietary analysis provides a new and promising complementary approach to visual examination of stomach contents, although some technical challenges still exist. The suggested method standardisation facilitates comparisons across species, ecosystems and time and will enhance the applicability and benefits of fish feeding studies in trophic ecology research.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>31589769</pmid><doi>10.1111/jfb.14151</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-2203-8216</orcidid><orcidid>https://orcid.org/0000-0001-9684-4774</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Agriculture and fishery disciplines: 900 Animals Aquatic ecosystems Deoxyribonucleic acid Diet Diet - veterinary DNA Ecological monitoring Ecological research Ecology Ecosystem Ecosystems Feeding Fish Fisheries science: 920 Fishes Fiskerifag: 920 food Food Chain Food consumption foraging Gastrointestinal Contents Gravimetry Landbruks- og Fiskerifag: 900 Mathematical models method standardisation Methods Numerical methods Prey prey consumption Prey selection Procedures Stomach Stomach content trophic ecology Trophic relationships VDP |
title | Feeding studies take guts – critical review and recommendations of methods for stomach contents analysis in fish |
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