RNA-Seq Analysis of Developing Nasturtium Seeds (Tropaeolum majus): Identification and Characterization of an Additional Galactosyltransferase Involved in Xyloglucan Biosynthesis
A deep-sequencing approach was pursued utilizing 454 and Illumina sequencing methods to discover new genes involved in xyloglucan biosynthesis, cDNA sequences were generated from developing nasturtium (Tropaeolum majus) seeds, which produce large amounts of non-fucosylated xyloglucan as a seed stora...
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Veröffentlicht in: | 分子植物:英文版 2012, Vol.5 (5), p.984-992 |
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creator | Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly |
description | A deep-sequencing approach was pursued utilizing 454 and Illumina sequencing methods to discover new genes involved in xyloglucan biosynthesis, cDNA sequences were generated from developing nasturtium (Tropaeolum majus) seeds, which produce large amounts of non-fucosylated xyloglucan as a seed storage polymer. In addition to known xyloglucan biosynthetic genes, a previously uncharacterized putative xyloglucan galactosyltransferase was iden- tified. Analysis of an Arabidopsis thaliana mutant line defective in the corresponding ortholog (AT5G62220) revealed that this gene shows no redundancy with the previously characterized xyloglucan galactosyltransferase, MUR3, but is required for galactosyl-substitution of xyloglucan at a different position. The gene was termed XLT2 for Xyloglucan L-side chain galactosylTransferase position 2. It represents an enzyme in the same subclade of glycosyltransferase family 47 as MUR3. A double mutant defective in both MUR3 (mur3.1) and XLT2 led to an Arabidopsis plant with xyloglucan that consists essentially of only xylosylated glucosyl units, with no further substitutions. |
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Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</creator><creatorcontrib>Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</creatorcontrib><description>A deep-sequencing approach was pursued utilizing 454 and Illumina sequencing methods to discover new genes involved in xyloglucan biosynthesis, cDNA sequences were generated from developing nasturtium (Tropaeolum majus) seeds, which produce large amounts of non-fucosylated xyloglucan as a seed storage polymer. In addition to known xyloglucan biosynthetic genes, a previously uncharacterized putative xyloglucan galactosyltransferase was iden- tified. Analysis of an Arabidopsis thaliana mutant line defective in the corresponding ortholog (AT5G62220) revealed that this gene shows no redundancy with the previously characterized xyloglucan galactosyltransferase, MUR3, but is required for galactosyl-substitution of xyloglucan at a different position. The gene was termed XLT2 for Xyloglucan L-side chain galactosylTransferase position 2. It represents an enzyme in the same subclade of glycosyltransferase family 47 as MUR3. A double mutant defective in both MUR3 (mur3.1) and XLT2 led to an Arabidopsis plant with xyloglucan that consists essentially of only xylosylated glucosyl units, with no further substitutions.</description><identifier>ISSN: 1674-2052</identifier><identifier>EISSN: 1752-9867</identifier><language>eng</language><subject>半乳糖基转移酶 ; 旱金莲 ; 木葡聚糖 ; 生物合成基因 ; 种子贮藏 ; 表征 ; 识别 ; 金莲花</subject><ispartof>分子植物:英文版, 2012, Vol.5 (5), p.984-992</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://image.cqvip.com/vip1000/qk/90143B/90143B.jpg</thumbnail><link.rule.ids>314,780,784,4023</link.rule.ids></links><search><creatorcontrib>Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</creatorcontrib><title>RNA-Seq Analysis of Developing Nasturtium Seeds (Tropaeolum majus): Identification and Characterization of an Additional Galactosyltransferase Involved in Xyloglucan Biosynthesis</title><title>分子植物:英文版</title><addtitle>Molecular Plant</addtitle><description>A deep-sequencing approach was pursued utilizing 454 and Illumina sequencing methods to discover new genes involved in xyloglucan biosynthesis, cDNA sequences were generated from developing nasturtium (Tropaeolum majus) seeds, which produce large amounts of non-fucosylated xyloglucan as a seed storage polymer. In addition to known xyloglucan biosynthetic genes, a previously uncharacterized putative xyloglucan galactosyltransferase was iden- tified. Analysis of an Arabidopsis thaliana mutant line defective in the corresponding ortholog (AT5G62220) revealed that this gene shows no redundancy with the previously characterized xyloglucan galactosyltransferase, MUR3, but is required for galactosyl-substitution of xyloglucan at a different position. The gene was termed XLT2 for Xyloglucan L-side chain galactosylTransferase position 2. It represents an enzyme in the same subclade of glycosyltransferase family 47 as MUR3. A double mutant defective in both MUR3 (mur3.1) and XLT2 led to an Arabidopsis plant with xyloglucan that consists essentially of only xylosylated glucosyl units, with no further substitutions.</description><subject>半乳糖基转移酶</subject><subject>旱金莲</subject><subject>木葡聚糖</subject><subject>生物合成基因</subject><subject>种子贮藏</subject><subject>表征</subject><subject>识别</subject><subject>金莲花</subject><issn>1674-2052</issn><issn>1752-9867</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><recordid>eNqNjktOw0AQRC0EEuFzh-YAloz_WZrwyyYLkgW7qOVp2xONZ5yZsSVzArgCJ2HhO_kKDIIDsOrq0qtSnXiL2ywJ_WWeZqdOp1nsh0ESnnsXxhyCIA3yNFp4Xy-bwt_SEQqJYjTcgKrgngYSquOyhg0a22vL-xa2RMzAPL3vtOqQlHBei4fezNPHPH3CmpG0vOIlWq4koGSwalBjaUnzt1_TlaOEgjH-86KAJxQOUGYUVqM0FWk0BGs5KDEQAy7hdRSqFn3pcnfcgdI25HZeeWcVCkPXf_fSu3l82K2e_bJRsj667ftO8xb1uI-jOMmXUR79h_kG70hqgQ</recordid><startdate>2012</startdate><enddate>2012</enddate><creator>Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</creator><scope>2RA</scope><scope>92L</scope><scope>CQIGP</scope><scope>W94</scope><scope>WU4</scope><scope>~WA</scope></search><sort><creationdate>2012</creationdate><title>RNA-Seq Analysis of Developing Nasturtium Seeds (Tropaeolum majus): Identification and Characterization of an Additional Galactosyltransferase Involved in Xyloglucan Biosynthesis</title><author>Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-chongqing_primary_434589383</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>半乳糖基转移酶</topic><topic>旱金莲</topic><topic>木葡聚糖</topic><topic>生物合成基因</topic><topic>种子贮藏</topic><topic>表征</topic><topic>识别</topic><topic>金莲花</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</creatorcontrib><collection>中文科技期刊数据库</collection><collection>中文科技期刊数据库-CALIS站点</collection><collection>中文科技期刊数据库-7.0平台</collection><collection>中文科技期刊数据库-自然科学</collection><collection>中文科技期刊数据库-自然科学-生物科学</collection><collection>中文科技期刊数据库- 镜像站点</collection><jtitle>分子植物:英文版</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jacob K. Jensen Alex Schultink Kenneth Keegstra Curtis G. Wilkerson Markus Pauly</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RNA-Seq Analysis of Developing Nasturtium Seeds (Tropaeolum majus): Identification and Characterization of an Additional Galactosyltransferase Involved in Xyloglucan Biosynthesis</atitle><jtitle>分子植物:英文版</jtitle><addtitle>Molecular Plant</addtitle><date>2012</date><risdate>2012</risdate><volume>5</volume><issue>5</issue><spage>984</spage><epage>992</epage><pages>984-992</pages><issn>1674-2052</issn><eissn>1752-9867</eissn><abstract>A deep-sequencing approach was pursued utilizing 454 and Illumina sequencing methods to discover new genes involved in xyloglucan biosynthesis, cDNA sequences were generated from developing nasturtium (Tropaeolum majus) seeds, which produce large amounts of non-fucosylated xyloglucan as a seed storage polymer. In addition to known xyloglucan biosynthetic genes, a previously uncharacterized putative xyloglucan galactosyltransferase was iden- tified. Analysis of an Arabidopsis thaliana mutant line defective in the corresponding ortholog (AT5G62220) revealed that this gene shows no redundancy with the previously characterized xyloglucan galactosyltransferase, MUR3, but is required for galactosyl-substitution of xyloglucan at a different position. The gene was termed XLT2 for Xyloglucan L-side chain galactosylTransferase position 2. It represents an enzyme in the same subclade of glycosyltransferase family 47 as MUR3. A double mutant defective in both MUR3 (mur3.1) and XLT2 led to an Arabidopsis plant with xyloglucan that consists essentially of only xylosylated glucosyl units, with no further substitutions.</abstract></addata></record> |
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subjects | 半乳糖基转移酶 旱金莲 木葡聚糖 生物合成基因 种子贮藏 表征 识别 金莲花 |
title | RNA-Seq Analysis of Developing Nasturtium Seeds (Tropaeolum majus): Identification and Characterization of an Additional Galactosyltransferase Involved in Xyloglucan Biosynthesis |
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