Extended error threshold mechanism in {\it quasispecies} theory via population dynamics
We investigate Eigen's model for the evolution of the genetic code of microorganisms using a novel method based on population dynamics analysis. This model, for a given number of offspring, determines long-term survival as a function of the "genetic" information length and copy error...
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creator | Velten, Hermano Pinheiro, Carlos Felipe Silva, Alcides Castro e |
description | We investigate Eigen's model for the evolution of the genetic code of
microorganisms using a novel method based on population dynamics analysis. This
model, for a given number of offspring, determines long-term survival as a
function of the "genetic" information length and copy error probability. There
exists a maximum threshold for the quantity of information that can be
consistently preserved through the process of evolution within a population of
perfectly replicating sequences, meaning no errors are allowed. With our
formula, we expand upon the traditional error threshold formula of Eigen's
theory and introduce a new expression for general cases where the
self-reproduction process allows up to any integer number of copying errors per
digit per replication step. |
doi_str_mv | 10.48550/arxiv.2406.14516 |
format | Article |
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microorganisms using a novel method based on population dynamics analysis. This
model, for a given number of offspring, determines long-term survival as a
function of the "genetic" information length and copy error probability. There
exists a maximum threshold for the quantity of information that can be
consistently preserved through the process of evolution within a population of
perfectly replicating sequences, meaning no errors are allowed. With our
formula, we expand upon the traditional error threshold formula of Eigen's
theory and introduce a new expression for general cases where the
self-reproduction process allows up to any integer number of copying errors per
digit per replication step.</description><identifier>DOI: 10.48550/arxiv.2406.14516</identifier><language>eng</language><subject>Quantitative Biology - Populations and Evolution</subject><creationdate>2024-06</creationdate><rights>http://creativecommons.org/licenses/by/4.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,780,885</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/2406.14516$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.2406.14516$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>Velten, Hermano</creatorcontrib><creatorcontrib>Pinheiro, Carlos Felipe</creatorcontrib><creatorcontrib>Silva, Alcides Castro e</creatorcontrib><title>Extended error threshold mechanism in {\it quasispecies} theory via population dynamics</title><description>We investigate Eigen's model for the evolution of the genetic code of
microorganisms using a novel method based on population dynamics analysis. This
model, for a given number of offspring, determines long-term survival as a
function of the "genetic" information length and copy error probability. There
exists a maximum threshold for the quantity of information that can be
consistently preserved through the process of evolution within a population of
perfectly replicating sequences, meaning no errors are allowed. With our
formula, we expand upon the traditional error threshold formula of Eigen's
theory and introduce a new expression for general cases where the
self-reproduction process allows up to any integer number of copying errors per
digit per replication step.</description><subject>Quantitative Biology - Populations and Evolution</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNotz8tKAzEYhuFsXEj1AlyZG5gx50yWUuoBCm4KboThz-QfJjAnk2lpEe9drV19m5cPHkLuOCtVpTV7gHSMh1IoZkquNDfX5H1zXHAMGCimNCW6dAlzN_WBDth0MMY80DjSr4-40M895JhnbCLm798Sp3Sihwh0nuZ9D0ucRhpOIwyxyTfkqoU-4-1lV2T3tNmtX4rt2_Pr-nFbgLGm8MK6inmpnKu4885xQNcgWBOgClLq4JjgvGXeGh0UCtAelRXWSyHaiskVuf-_PcvqOcUB0qn-E9ZnofwBhJ5NCw</recordid><startdate>20240620</startdate><enddate>20240620</enddate><creator>Velten, Hermano</creator><creator>Pinheiro, Carlos Felipe</creator><creator>Silva, Alcides Castro e</creator><scope>ALC</scope><scope>GOX</scope></search><sort><creationdate>20240620</creationdate><title>Extended error threshold mechanism in {\it quasispecies} theory via population dynamics</title><author>Velten, Hermano ; Pinheiro, Carlos Felipe ; Silva, Alcides Castro e</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a676-b27980b3499819b991ae9cea76da8d335d90211f0b765d4e2a5be4727b322f803</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Quantitative Biology - Populations and Evolution</topic><toplevel>online_resources</toplevel><creatorcontrib>Velten, Hermano</creatorcontrib><creatorcontrib>Pinheiro, Carlos Felipe</creatorcontrib><creatorcontrib>Silva, Alcides Castro e</creatorcontrib><collection>arXiv Quantitative Biology</collection><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Velten, Hermano</au><au>Pinheiro, Carlos Felipe</au><au>Silva, Alcides Castro e</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Extended error threshold mechanism in {\it quasispecies} theory via population dynamics</atitle><date>2024-06-20</date><risdate>2024</risdate><abstract>We investigate Eigen's model for the evolution of the genetic code of
microorganisms using a novel method based on population dynamics analysis. This
model, for a given number of offspring, determines long-term survival as a
function of the "genetic" information length and copy error probability. There
exists a maximum threshold for the quantity of information that can be
consistently preserved through the process of evolution within a population of
perfectly replicating sequences, meaning no errors are allowed. With our
formula, we expand upon the traditional error threshold formula of Eigen's
theory and introduce a new expression for general cases where the
self-reproduction process allows up to any integer number of copying errors per
digit per replication step.</abstract><doi>10.48550/arxiv.2406.14516</doi><oa>free_for_read</oa></addata></record> |
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subjects | Quantitative Biology - Populations and Evolution |
title | Extended error threshold mechanism in {\it quasispecies} theory via population dynamics |
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