GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration
Generalist foundation models (GFMs) are renowned for their exceptional capability and flexibility in effectively generalizing across diverse tasks and modalities. In the field of medicine, while GFMs exhibit superior generalizability based on their extensive intrinsic knowledge as well as proficienc...
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creator | He, Sunan Nie, Yuxiang Wang, Hongmei Yang, Shu Wang, Yihui Cai, Zhiyuan Chen, Zhixuan Xu, Yingxue Luo, Luyang Xiang, Huiling Lin, Xi Wu, Mingxiang Peng, Yifan Shih, George Xu, Ziyang Wu, Xian Wang, Qiong Chan, Ronald Cheong Kin Vardhanabhuti, Varut Chu, Winnie Chiu Wing Zheng, Yefeng Rajpurkar, Pranav Zhang, Kang Chen, Hao |
description | Generalist foundation models (GFMs) are renowned for their exceptional
capability and flexibility in effectively generalizing across diverse tasks and
modalities. In the field of medicine, while GFMs exhibit superior
generalizability based on their extensive intrinsic knowledge as well as
proficiency in instruction following and in-context learning, specialist models
excel in precision due to their domain knowledge. In this work, for the first
time, we explore the synergy between the GFM and specialist models, to enable
precise medical image analysis on a broader scope. Specifically, we propose a
cooperative framework, Generalist-Specialist Collaboration (GSCo), which
consists of two stages, namely the construction of GFM and specialists, and
collaborative inference on downstream tasks. In the construction stage, we
develop MedDr, the largest open-source GFM tailored for medicine, showcasing
exceptional instruction-following and in-context learning capabilities.
Meanwhile, a series of lightweight specialists are crafted for downstream tasks
with low computational cost. In the collaborative inference stage, we introduce
two cooperative mechanisms, Mixture-of-Expert Diagnosis and Retrieval-Augmented
Diagnosis, to harvest the generalist's in-context learning abilities alongside
the specialists' domain expertise. For a comprehensive evaluation, we curate a
large-scale benchmark featuring 28 datasets and about 250,000 images. Extensive
results demonstrate that MedDr consistently outperforms state-of-the-art GFMs
on downstream datasets. Furthermore, GSCo exceeds both GFMs and specialists
across all out-of-domain disease diagnosis datasets. These findings indicate a
significant paradigm shift in the application of GFMs, transitioning from
separate models for specific tasks to a collaborative approach between GFMs and
specialists, thereby advancing the frontiers of generalizable AI in medicine. |
doi_str_mv | 10.48550/arxiv.2404.15127 |
format | Article |
fullrecord | <record><control><sourceid>arxiv_GOX</sourceid><recordid>TN_cdi_arxiv_primary_2404_15127</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2404_15127</sourcerecordid><originalsourceid>FETCH-arxiv_primary_2404_151273</originalsourceid><addsrcrecordid>eNpjYJA0NNAzsTA1NdBPLKrILNMzMjEw0TM0NTQy52QIcg92zrdSCMkvTyxKKVZwT81LLUrMyaxKTMpJVXD0VMjMU_BNTclMzsxLVSjLTIQrKC7RDS5ITc4EMxWc83NyEpPyixJLMvPzeBhY0xJzilN5oTQ3g7yba4izhy7Y9viCoszcxKLKeJAr4sGuMCasAgAZ_jzH</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration</title><source>arXiv.org</source><creator>He, Sunan ; Nie, Yuxiang ; Wang, Hongmei ; Yang, Shu ; Wang, Yihui ; Cai, Zhiyuan ; Chen, Zhixuan ; Xu, Yingxue ; Luo, Luyang ; Xiang, Huiling ; Lin, Xi ; Wu, Mingxiang ; Peng, Yifan ; Shih, George ; Xu, Ziyang ; Wu, Xian ; Wang, Qiong ; Chan, Ronald Cheong Kin ; Vardhanabhuti, Varut ; Chu, Winnie Chiu Wing ; Zheng, Yefeng ; Rajpurkar, Pranav ; Zhang, Kang ; Chen, Hao</creator><creatorcontrib>He, Sunan ; Nie, Yuxiang ; Wang, Hongmei ; Yang, Shu ; Wang, Yihui ; Cai, Zhiyuan ; Chen, Zhixuan ; Xu, Yingxue ; Luo, Luyang ; Xiang, Huiling ; Lin, Xi ; Wu, Mingxiang ; Peng, Yifan ; Shih, George ; Xu, Ziyang ; Wu, Xian ; Wang, Qiong ; Chan, Ronald Cheong Kin ; Vardhanabhuti, Varut ; Chu, Winnie Chiu Wing ; Zheng, Yefeng ; Rajpurkar, Pranav ; Zhang, Kang ; Chen, Hao</creatorcontrib><description>Generalist foundation models (GFMs) are renowned for their exceptional
capability and flexibility in effectively generalizing across diverse tasks and
modalities. In the field of medicine, while GFMs exhibit superior
generalizability based on their extensive intrinsic knowledge as well as
proficiency in instruction following and in-context learning, specialist models
excel in precision due to their domain knowledge. In this work, for the first
time, we explore the synergy between the GFM and specialist models, to enable
precise medical image analysis on a broader scope. Specifically, we propose a
cooperative framework, Generalist-Specialist Collaboration (GSCo), which
consists of two stages, namely the construction of GFM and specialists, and
collaborative inference on downstream tasks. In the construction stage, we
develop MedDr, the largest open-source GFM tailored for medicine, showcasing
exceptional instruction-following and in-context learning capabilities.
Meanwhile, a series of lightweight specialists are crafted for downstream tasks
with low computational cost. In the collaborative inference stage, we introduce
two cooperative mechanisms, Mixture-of-Expert Diagnosis and Retrieval-Augmented
Diagnosis, to harvest the generalist's in-context learning abilities alongside
the specialists' domain expertise. For a comprehensive evaluation, we curate a
large-scale benchmark featuring 28 datasets and about 250,000 images. Extensive
results demonstrate that MedDr consistently outperforms state-of-the-art GFMs
on downstream datasets. Furthermore, GSCo exceeds both GFMs and specialists
across all out-of-domain disease diagnosis datasets. These findings indicate a
significant paradigm shift in the application of GFMs, transitioning from
separate models for specific tasks to a collaborative approach between GFMs and
specialists, thereby advancing the frontiers of generalizable AI in medicine.</description><identifier>DOI: 10.48550/arxiv.2404.15127</identifier><language>eng</language><subject>Computer Science - Computation and Language ; Computer Science - Computer Vision and Pattern Recognition</subject><creationdate>2024-04</creationdate><rights>http://arxiv.org/licenses/nonexclusive-distrib/1.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,780,885</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/2404.15127$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.2404.15127$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>He, Sunan</creatorcontrib><creatorcontrib>Nie, Yuxiang</creatorcontrib><creatorcontrib>Wang, Hongmei</creatorcontrib><creatorcontrib>Yang, Shu</creatorcontrib><creatorcontrib>Wang, Yihui</creatorcontrib><creatorcontrib>Cai, Zhiyuan</creatorcontrib><creatorcontrib>Chen, Zhixuan</creatorcontrib><creatorcontrib>Xu, Yingxue</creatorcontrib><creatorcontrib>Luo, Luyang</creatorcontrib><creatorcontrib>Xiang, Huiling</creatorcontrib><creatorcontrib>Lin, Xi</creatorcontrib><creatorcontrib>Wu, Mingxiang</creatorcontrib><creatorcontrib>Peng, Yifan</creatorcontrib><creatorcontrib>Shih, George</creatorcontrib><creatorcontrib>Xu, Ziyang</creatorcontrib><creatorcontrib>Wu, Xian</creatorcontrib><creatorcontrib>Wang, Qiong</creatorcontrib><creatorcontrib>Chan, Ronald Cheong Kin</creatorcontrib><creatorcontrib>Vardhanabhuti, Varut</creatorcontrib><creatorcontrib>Chu, Winnie Chiu Wing</creatorcontrib><creatorcontrib>Zheng, Yefeng</creatorcontrib><creatorcontrib>Rajpurkar, Pranav</creatorcontrib><creatorcontrib>Zhang, Kang</creatorcontrib><creatorcontrib>Chen, Hao</creatorcontrib><title>GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration</title><description>Generalist foundation models (GFMs) are renowned for their exceptional
capability and flexibility in effectively generalizing across diverse tasks and
modalities. In the field of medicine, while GFMs exhibit superior
generalizability based on their extensive intrinsic knowledge as well as
proficiency in instruction following and in-context learning, specialist models
excel in precision due to their domain knowledge. In this work, for the first
time, we explore the synergy between the GFM and specialist models, to enable
precise medical image analysis on a broader scope. Specifically, we propose a
cooperative framework, Generalist-Specialist Collaboration (GSCo), which
consists of two stages, namely the construction of GFM and specialists, and
collaborative inference on downstream tasks. In the construction stage, we
develop MedDr, the largest open-source GFM tailored for medicine, showcasing
exceptional instruction-following and in-context learning capabilities.
Meanwhile, a series of lightweight specialists are crafted for downstream tasks
with low computational cost. In the collaborative inference stage, we introduce
two cooperative mechanisms, Mixture-of-Expert Diagnosis and Retrieval-Augmented
Diagnosis, to harvest the generalist's in-context learning abilities alongside
the specialists' domain expertise. For a comprehensive evaluation, we curate a
large-scale benchmark featuring 28 datasets and about 250,000 images. Extensive
results demonstrate that MedDr consistently outperforms state-of-the-art GFMs
on downstream datasets. Furthermore, GSCo exceeds both GFMs and specialists
across all out-of-domain disease diagnosis datasets. These findings indicate a
significant paradigm shift in the application of GFMs, transitioning from
separate models for specific tasks to a collaborative approach between GFMs and
specialists, thereby advancing the frontiers of generalizable AI in medicine.</description><subject>Computer Science - Computation and Language</subject><subject>Computer Science - Computer Vision and Pattern Recognition</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNpjYJA0NNAzsTA1NdBPLKrILNMzMjEw0TM0NTQy52QIcg92zrdSCMkvTyxKKVZwT81LLUrMyaxKTMpJVXD0VMjMU_BNTclMzsxLVSjLTIQrKC7RDS5ITc4EMxWc83NyEpPyixJLMvPzeBhY0xJzilN5oTQ3g7yba4izhy7Y9viCoszcxKLKeJAr4sGuMCasAgAZ_jzH</recordid><startdate>20240423</startdate><enddate>20240423</enddate><creator>He, Sunan</creator><creator>Nie, Yuxiang</creator><creator>Wang, Hongmei</creator><creator>Yang, Shu</creator><creator>Wang, Yihui</creator><creator>Cai, Zhiyuan</creator><creator>Chen, Zhixuan</creator><creator>Xu, Yingxue</creator><creator>Luo, Luyang</creator><creator>Xiang, Huiling</creator><creator>Lin, Xi</creator><creator>Wu, Mingxiang</creator><creator>Peng, Yifan</creator><creator>Shih, George</creator><creator>Xu, Ziyang</creator><creator>Wu, Xian</creator><creator>Wang, Qiong</creator><creator>Chan, Ronald Cheong Kin</creator><creator>Vardhanabhuti, Varut</creator><creator>Chu, Winnie Chiu Wing</creator><creator>Zheng, Yefeng</creator><creator>Rajpurkar, Pranav</creator><creator>Zhang, Kang</creator><creator>Chen, Hao</creator><scope>AKY</scope><scope>GOX</scope></search><sort><creationdate>20240423</creationdate><title>GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration</title><author>He, Sunan ; Nie, Yuxiang ; Wang, Hongmei ; Yang, Shu ; Wang, Yihui ; Cai, Zhiyuan ; Chen, Zhixuan ; Xu, Yingxue ; Luo, Luyang ; Xiang, Huiling ; Lin, Xi ; Wu, Mingxiang ; Peng, Yifan ; Shih, George ; Xu, Ziyang ; Wu, Xian ; Wang, Qiong ; Chan, Ronald Cheong Kin ; Vardhanabhuti, Varut ; Chu, Winnie Chiu Wing ; Zheng, Yefeng ; Rajpurkar, Pranav ; Zhang, Kang ; Chen, Hao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-arxiv_primary_2404_151273</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Computer Science - Computation and Language</topic><topic>Computer Science - Computer Vision and Pattern Recognition</topic><toplevel>online_resources</toplevel><creatorcontrib>He, Sunan</creatorcontrib><creatorcontrib>Nie, Yuxiang</creatorcontrib><creatorcontrib>Wang, Hongmei</creatorcontrib><creatorcontrib>Yang, Shu</creatorcontrib><creatorcontrib>Wang, Yihui</creatorcontrib><creatorcontrib>Cai, Zhiyuan</creatorcontrib><creatorcontrib>Chen, Zhixuan</creatorcontrib><creatorcontrib>Xu, Yingxue</creatorcontrib><creatorcontrib>Luo, Luyang</creatorcontrib><creatorcontrib>Xiang, Huiling</creatorcontrib><creatorcontrib>Lin, Xi</creatorcontrib><creatorcontrib>Wu, Mingxiang</creatorcontrib><creatorcontrib>Peng, Yifan</creatorcontrib><creatorcontrib>Shih, George</creatorcontrib><creatorcontrib>Xu, Ziyang</creatorcontrib><creatorcontrib>Wu, Xian</creatorcontrib><creatorcontrib>Wang, Qiong</creatorcontrib><creatorcontrib>Chan, Ronald Cheong Kin</creatorcontrib><creatorcontrib>Vardhanabhuti, Varut</creatorcontrib><creatorcontrib>Chu, Winnie Chiu Wing</creatorcontrib><creatorcontrib>Zheng, Yefeng</creatorcontrib><creatorcontrib>Rajpurkar, Pranav</creatorcontrib><creatorcontrib>Zhang, Kang</creatorcontrib><creatorcontrib>Chen, Hao</creatorcontrib><collection>arXiv Computer Science</collection><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>He, Sunan</au><au>Nie, Yuxiang</au><au>Wang, Hongmei</au><au>Yang, Shu</au><au>Wang, Yihui</au><au>Cai, Zhiyuan</au><au>Chen, Zhixuan</au><au>Xu, Yingxue</au><au>Luo, Luyang</au><au>Xiang, Huiling</au><au>Lin, Xi</au><au>Wu, Mingxiang</au><au>Peng, Yifan</au><au>Shih, George</au><au>Xu, Ziyang</au><au>Wu, Xian</au><au>Wang, Qiong</au><au>Chan, Ronald Cheong Kin</au><au>Vardhanabhuti, Varut</au><au>Chu, Winnie Chiu Wing</au><au>Zheng, Yefeng</au><au>Rajpurkar, Pranav</au><au>Zhang, Kang</au><au>Chen, Hao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration</atitle><date>2024-04-23</date><risdate>2024</risdate><abstract>Generalist foundation models (GFMs) are renowned for their exceptional
capability and flexibility in effectively generalizing across diverse tasks and
modalities. In the field of medicine, while GFMs exhibit superior
generalizability based on their extensive intrinsic knowledge as well as
proficiency in instruction following and in-context learning, specialist models
excel in precision due to their domain knowledge. In this work, for the first
time, we explore the synergy between the GFM and specialist models, to enable
precise medical image analysis on a broader scope. Specifically, we propose a
cooperative framework, Generalist-Specialist Collaboration (GSCo), which
consists of two stages, namely the construction of GFM and specialists, and
collaborative inference on downstream tasks. In the construction stage, we
develop MedDr, the largest open-source GFM tailored for medicine, showcasing
exceptional instruction-following and in-context learning capabilities.
Meanwhile, a series of lightweight specialists are crafted for downstream tasks
with low computational cost. In the collaborative inference stage, we introduce
two cooperative mechanisms, Mixture-of-Expert Diagnosis and Retrieval-Augmented
Diagnosis, to harvest the generalist's in-context learning abilities alongside
the specialists' domain expertise. For a comprehensive evaluation, we curate a
large-scale benchmark featuring 28 datasets and about 250,000 images. Extensive
results demonstrate that MedDr consistently outperforms state-of-the-art GFMs
on downstream datasets. Furthermore, GSCo exceeds both GFMs and specialists
across all out-of-domain disease diagnosis datasets. These findings indicate a
significant paradigm shift in the application of GFMs, transitioning from
separate models for specific tasks to a collaborative approach between GFMs and
specialists, thereby advancing the frontiers of generalizable AI in medicine.</abstract><doi>10.48550/arxiv.2404.15127</doi><oa>free_for_read</oa></addata></record> |
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title | GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration |
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