A Framework for a High Throughput Screening Method to Assess Polymer/Plasticizer Miscibility
Polymer composite materials require softening to reduce their glass transition temperature and improve processability. To this end, plasticizers, which are small organic molecules, are added to the polymer matrix. The miscibility of these plasticizers has a large impact on their effectiveness and th...
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creator | Smith, Lois Karimi-Varzaneh, H. Ali Finger, Sebastian Giunta, Giuliana Troisi, Alessandro Carbone, Paola |
description | Polymer composite materials require softening to reduce their glass
transition temperature and improve processability. To this end, plasticizers,
which are small organic molecules, are added to the polymer matrix. The
miscibility of these plasticizers has a large impact on their effectiveness and
therefore their interactions with the polymer matrix must be carefully
considered. Many plasticizer characteristics, including their size, topology
and flexibility, can impact their miscibility and, because of the exponentially
large numbers of plasticizers, the current trial-and-error approach is very
ineffective. In this work we show that using molecular simulations of a small
dataset of 48 plasticizers, it is possible to identify topological and
thermodynamic descriptors that are proxy for their miscibility. Using ad-hoc
molecular dynamics simulation set-ups that are relatively computationally
inexpensive, we establish correlations between the plasticizers' topology,
internal flexibility, thermodynamics of aggregation and their degree of
miscibility and use these descriptors to classify the molecules as miscible or
immiscible. With all available data we also construct a decision tree model
which achieves a F1 score of 0.86 +/- 0.01 with repeated, stratified 5-fold
cross-validation, indicating that this machine learning method is a promising
route to fully automate the screening. By evaluating the individual performance
of the descriptors, we show this procedure enables a 10-fold reduction of the
test space and provides the basis for the development of workflows which can
efficiently screen thousands of plasticizers with a variety of features. |
doi_str_mv | 10.48550/arxiv.2404.02676 |
format | Article |
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transition temperature and improve processability. To this end, plasticizers,
which are small organic molecules, are added to the polymer matrix. The
miscibility of these plasticizers has a large impact on their effectiveness and
therefore their interactions with the polymer matrix must be carefully
considered. Many plasticizer characteristics, including their size, topology
and flexibility, can impact their miscibility and, because of the exponentially
large numbers of plasticizers, the current trial-and-error approach is very
ineffective. In this work we show that using molecular simulations of a small
dataset of 48 plasticizers, it is possible to identify topological and
thermodynamic descriptors that are proxy for their miscibility. Using ad-hoc
molecular dynamics simulation set-ups that are relatively computationally
inexpensive, we establish correlations between the plasticizers' topology,
internal flexibility, thermodynamics of aggregation and their degree of
miscibility and use these descriptors to classify the molecules as miscible or
immiscible. With all available data we also construct a decision tree model
which achieves a F1 score of 0.86 +/- 0.01 with repeated, stratified 5-fold
cross-validation, indicating that this machine learning method is a promising
route to fully automate the screening. By evaluating the individual performance
of the descriptors, we show this procedure enables a 10-fold reduction of the
test space and provides the basis for the development of workflows which can
efficiently screen thousands of plasticizers with a variety of features.</description><identifier>DOI: 10.48550/arxiv.2404.02676</identifier><language>eng</language><subject>Physics - Soft Condensed Matter</subject><creationdate>2024-04</creationdate><rights>http://creativecommons.org/licenses/by/4.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,780,885</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/2404.02676$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.2404.02676$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>Smith, Lois</creatorcontrib><creatorcontrib>Karimi-Varzaneh, H. Ali</creatorcontrib><creatorcontrib>Finger, Sebastian</creatorcontrib><creatorcontrib>Giunta, Giuliana</creatorcontrib><creatorcontrib>Troisi, Alessandro</creatorcontrib><creatorcontrib>Carbone, Paola</creatorcontrib><title>A Framework for a High Throughput Screening Method to Assess Polymer/Plasticizer Miscibility</title><description>Polymer composite materials require softening to reduce their glass
transition temperature and improve processability. To this end, plasticizers,
which are small organic molecules, are added to the polymer matrix. The
miscibility of these plasticizers has a large impact on their effectiveness and
therefore their interactions with the polymer matrix must be carefully
considered. Many plasticizer characteristics, including their size, topology
and flexibility, can impact their miscibility and, because of the exponentially
large numbers of plasticizers, the current trial-and-error approach is very
ineffective. In this work we show that using molecular simulations of a small
dataset of 48 plasticizers, it is possible to identify topological and
thermodynamic descriptors that are proxy for their miscibility. Using ad-hoc
molecular dynamics simulation set-ups that are relatively computationally
inexpensive, we establish correlations between the plasticizers' topology,
internal flexibility, thermodynamics of aggregation and their degree of
miscibility and use these descriptors to classify the molecules as miscible or
immiscible. With all available data we also construct a decision tree model
which achieves a F1 score of 0.86 +/- 0.01 with repeated, stratified 5-fold
cross-validation, indicating that this machine learning method is a promising
route to fully automate the screening. By evaluating the individual performance
of the descriptors, we show this procedure enables a 10-fold reduction of the
test space and provides the basis for the development of workflows which can
efficiently screen thousands of plasticizers with a variety of features.</description><subject>Physics - Soft Condensed Matter</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNotz01OwzAUBGBvWKDCAVjxLpDUdvxTllFFKVKrVtAlUuQ4z4lFWld2CoTTUwqr2YxG8xFyx2guZlLSqYlf_iPngoqccqXVNXkrYRHNHj9DfAcXIhhY-raDXRfDqe2OpwFebUQ8-EMLaxy60MAQoEwJU4Jt6Mc9xum2N2nw1n9jhLVP1te-98N4Q66c6RPe_ueEvCwed_Nltto8Pc_LVWbOHzLOpGLaWKkL5lRhC2Ra17NaoWGOO91oq514OFekk5wKyqiiWmDDOWpZTMj93-gFVx2j35s4Vr_I6oIsfgCJlUyv</recordid><startdate>20240403</startdate><enddate>20240403</enddate><creator>Smith, Lois</creator><creator>Karimi-Varzaneh, H. Ali</creator><creator>Finger, Sebastian</creator><creator>Giunta, Giuliana</creator><creator>Troisi, Alessandro</creator><creator>Carbone, Paola</creator><scope>GOX</scope></search><sort><creationdate>20240403</creationdate><title>A Framework for a High Throughput Screening Method to Assess Polymer/Plasticizer Miscibility</title><author>Smith, Lois ; Karimi-Varzaneh, H. Ali ; Finger, Sebastian ; Giunta, Giuliana ; Troisi, Alessandro ; Carbone, Paola</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a676-215617ac5731f63c3e177b8b6ea1f2f7d7c7f4917a5f52040106074ed22e753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Physics - Soft Condensed Matter</topic><toplevel>online_resources</toplevel><creatorcontrib>Smith, Lois</creatorcontrib><creatorcontrib>Karimi-Varzaneh, H. Ali</creatorcontrib><creatorcontrib>Finger, Sebastian</creatorcontrib><creatorcontrib>Giunta, Giuliana</creatorcontrib><creatorcontrib>Troisi, Alessandro</creatorcontrib><creatorcontrib>Carbone, Paola</creatorcontrib><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Smith, Lois</au><au>Karimi-Varzaneh, H. Ali</au><au>Finger, Sebastian</au><au>Giunta, Giuliana</au><au>Troisi, Alessandro</au><au>Carbone, Paola</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Framework for a High Throughput Screening Method to Assess Polymer/Plasticizer Miscibility</atitle><date>2024-04-03</date><risdate>2024</risdate><abstract>Polymer composite materials require softening to reduce their glass
transition temperature and improve processability. To this end, plasticizers,
which are small organic molecules, are added to the polymer matrix. The
miscibility of these plasticizers has a large impact on their effectiveness and
therefore their interactions with the polymer matrix must be carefully
considered. Many plasticizer characteristics, including their size, topology
and flexibility, can impact their miscibility and, because of the exponentially
large numbers of plasticizers, the current trial-and-error approach is very
ineffective. In this work we show that using molecular simulations of a small
dataset of 48 plasticizers, it is possible to identify topological and
thermodynamic descriptors that are proxy for their miscibility. Using ad-hoc
molecular dynamics simulation set-ups that are relatively computationally
inexpensive, we establish correlations between the plasticizers' topology,
internal flexibility, thermodynamics of aggregation and their degree of
miscibility and use these descriptors to classify the molecules as miscible or
immiscible. With all available data we also construct a decision tree model
which achieves a F1 score of 0.86 +/- 0.01 with repeated, stratified 5-fold
cross-validation, indicating that this machine learning method is a promising
route to fully automate the screening. By evaluating the individual performance
of the descriptors, we show this procedure enables a 10-fold reduction of the
test space and provides the basis for the development of workflows which can
efficiently screen thousands of plasticizers with a variety of features.</abstract><doi>10.48550/arxiv.2404.02676</doi><oa>free_for_read</oa></addata></record> |
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subjects | Physics - Soft Condensed Matter |
title | A Framework for a High Throughput Screening Method to Assess Polymer/Plasticizer Miscibility |
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