WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT

Cochlear implantation is currently the most effective treatment for patients with severe deafness, but mastering cochlear implantation is extremely challenging because the temporal bone has extremely complex and small three-dimensional anatomical structures, and it is important to avoid damaging the...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Hauptverfasser: Hua, Xin, Du, Zhijiang, Yu, Hongjian, Ma, Jixin, Zheng, Fanjun, Zhang, Cheng, Lu, Qiaohui, Zhao, Hui
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext bestellen
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue
container_start_page
container_title
container_volume
creator Hua, Xin
Du, Zhijiang
Yu, Hongjian
Ma, Jixin
Zheng, Fanjun
Zhang, Cheng
Lu, Qiaohui
Zhao, Hui
description Cochlear implantation is currently the most effective treatment for patients with severe deafness, but mastering cochlear implantation is extremely challenging because the temporal bone has extremely complex and small three-dimensional anatomical structures, and it is important to avoid damaging the corresponding structures when performing surgery. The spatial location of the relevant anatomical tissues within the target area needs to be determined using CT prior to the procedure. Considering that the target structures are too small and complex, the time required for manual segmentation is too long, and it is extremely challenging to segment the temporal bone and its nearby anatomical structures quickly and accurately. To overcome this difficulty, we propose a deep learning-based algorithm, a 3D network model for automatic segmentation of multi-structural targets in temporal bone CT that can automatically segment the cochlea, facial nerve, auditory tubercle, vestibule and semicircular canal. The algorithm combines CNN and Transformer for feature extraction and takes advantage of spatial attention and channel attention mechanisms to further improve the segmentation effect, the experimental results comparing with the results of various existing segmentation algorithms show that the dice similarity scores, Jaccard coefficients of all targets anatomical structures are significantly higher while HD95 and ASSD scores are lower, effectively proving that our method outperforms other advanced methods.
doi_str_mv 10.48550/arxiv.2211.07143
format Article
fullrecord <record><control><sourceid>arxiv_GOX</sourceid><recordid>TN_cdi_arxiv_primary_2211_07143</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2211_07143</sourcerecordid><originalsourceid>FETCH-LOGICAL-a673-7ba0d3735ddcf718b61512c8d26b6872eadb4c51948956319b9e82bcb23eddc73</originalsourceid><addsrcrecordid>eNotj7lqxDAURdWkCJN8QKq8H7BjSdbidIOzwkCKGKYajDYHE0saZDnL32eWVLc43AMHoRtclbVkrLpT6Wf8KgnBuKwErukl2m3f26JLKsz3sAb6AMHl75g-wUfrJhhiArXk6FUeDfhlymMx57SYvCQ1wew-vAv5AGOAOEB2fh-PQMfgoO2u0MWgptld_-8KdU-PXftSbN6eX9v1plBc0EJoVVkqKLPWDAJLzTHDxEhLuOZSEKesrg3DTS0bxiludOMk0UYT6g4XQVfo9qw99fX7NHqVfvtjZ3_qpH9Je035</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT</title><source>arXiv.org</source><creator>Hua, Xin ; Du, Zhijiang ; Yu, Hongjian ; Ma, Jixin ; Zheng, Fanjun ; Zhang, Cheng ; Lu, Qiaohui ; Zhao, Hui</creator><creatorcontrib>Hua, Xin ; Du, Zhijiang ; Yu, Hongjian ; Ma, Jixin ; Zheng, Fanjun ; Zhang, Cheng ; Lu, Qiaohui ; Zhao, Hui</creatorcontrib><description>Cochlear implantation is currently the most effective treatment for patients with severe deafness, but mastering cochlear implantation is extremely challenging because the temporal bone has extremely complex and small three-dimensional anatomical structures, and it is important to avoid damaging the corresponding structures when performing surgery. The spatial location of the relevant anatomical tissues within the target area needs to be determined using CT prior to the procedure. Considering that the target structures are too small and complex, the time required for manual segmentation is too long, and it is extremely challenging to segment the temporal bone and its nearby anatomical structures quickly and accurately. To overcome this difficulty, we propose a deep learning-based algorithm, a 3D network model for automatic segmentation of multi-structural targets in temporal bone CT that can automatically segment the cochlea, facial nerve, auditory tubercle, vestibule and semicircular canal. The algorithm combines CNN and Transformer for feature extraction and takes advantage of spatial attention and channel attention mechanisms to further improve the segmentation effect, the experimental results comparing with the results of various existing segmentation algorithms show that the dice similarity scores, Jaccard coefficients of all targets anatomical structures are significantly higher while HD95 and ASSD scores are lower, effectively proving that our method outperforms other advanced methods.</description><identifier>DOI: 10.48550/arxiv.2211.07143</identifier><language>eng</language><subject>Computer Science - Computer Vision and Pattern Recognition</subject><creationdate>2022-11</creationdate><rights>http://arxiv.org/licenses/nonexclusive-distrib/1.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,781,886</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/2211.07143$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.2211.07143$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>Hua, Xin</creatorcontrib><creatorcontrib>Du, Zhijiang</creatorcontrib><creatorcontrib>Yu, Hongjian</creatorcontrib><creatorcontrib>Ma, Jixin</creatorcontrib><creatorcontrib>Zheng, Fanjun</creatorcontrib><creatorcontrib>Zhang, Cheng</creatorcontrib><creatorcontrib>Lu, Qiaohui</creatorcontrib><creatorcontrib>Zhao, Hui</creatorcontrib><title>WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT</title><description>Cochlear implantation is currently the most effective treatment for patients with severe deafness, but mastering cochlear implantation is extremely challenging because the temporal bone has extremely complex and small three-dimensional anatomical structures, and it is important to avoid damaging the corresponding structures when performing surgery. The spatial location of the relevant anatomical tissues within the target area needs to be determined using CT prior to the procedure. Considering that the target structures are too small and complex, the time required for manual segmentation is too long, and it is extremely challenging to segment the temporal bone and its nearby anatomical structures quickly and accurately. To overcome this difficulty, we propose a deep learning-based algorithm, a 3D network model for automatic segmentation of multi-structural targets in temporal bone CT that can automatically segment the cochlea, facial nerve, auditory tubercle, vestibule and semicircular canal. The algorithm combines CNN and Transformer for feature extraction and takes advantage of spatial attention and channel attention mechanisms to further improve the segmentation effect, the experimental results comparing with the results of various existing segmentation algorithms show that the dice similarity scores, Jaccard coefficients of all targets anatomical structures are significantly higher while HD95 and ASSD scores are lower, effectively proving that our method outperforms other advanced methods.</description><subject>Computer Science - Computer Vision and Pattern Recognition</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNotj7lqxDAURdWkCJN8QKq8H7BjSdbidIOzwkCKGKYajDYHE0saZDnL32eWVLc43AMHoRtclbVkrLpT6Wf8KgnBuKwErukl2m3f26JLKsz3sAb6AMHl75g-wUfrJhhiArXk6FUeDfhlymMx57SYvCQ1wew-vAv5AGOAOEB2fh-PQMfgoO2u0MWgptld_-8KdU-PXftSbN6eX9v1plBc0EJoVVkqKLPWDAJLzTHDxEhLuOZSEKesrg3DTS0bxiludOMk0UYT6g4XQVfo9qw99fX7NHqVfvtjZ3_qpH9Je035</recordid><startdate>20221114</startdate><enddate>20221114</enddate><creator>Hua, Xin</creator><creator>Du, Zhijiang</creator><creator>Yu, Hongjian</creator><creator>Ma, Jixin</creator><creator>Zheng, Fanjun</creator><creator>Zhang, Cheng</creator><creator>Lu, Qiaohui</creator><creator>Zhao, Hui</creator><scope>AKY</scope><scope>GOX</scope></search><sort><creationdate>20221114</creationdate><title>WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT</title><author>Hua, Xin ; Du, Zhijiang ; Yu, Hongjian ; Ma, Jixin ; Zheng, Fanjun ; Zhang, Cheng ; Lu, Qiaohui ; Zhao, Hui</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a673-7ba0d3735ddcf718b61512c8d26b6872eadb4c51948956319b9e82bcb23eddc73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Computer Science - Computer Vision and Pattern Recognition</topic><toplevel>online_resources</toplevel><creatorcontrib>Hua, Xin</creatorcontrib><creatorcontrib>Du, Zhijiang</creatorcontrib><creatorcontrib>Yu, Hongjian</creatorcontrib><creatorcontrib>Ma, Jixin</creatorcontrib><creatorcontrib>Zheng, Fanjun</creatorcontrib><creatorcontrib>Zhang, Cheng</creatorcontrib><creatorcontrib>Lu, Qiaohui</creatorcontrib><creatorcontrib>Zhao, Hui</creatorcontrib><collection>arXiv Computer Science</collection><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Hua, Xin</au><au>Du, Zhijiang</au><au>Yu, Hongjian</au><au>Ma, Jixin</au><au>Zheng, Fanjun</au><au>Zhang, Cheng</au><au>Lu, Qiaohui</au><au>Zhao, Hui</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT</atitle><date>2022-11-14</date><risdate>2022</risdate><abstract>Cochlear implantation is currently the most effective treatment for patients with severe deafness, but mastering cochlear implantation is extremely challenging because the temporal bone has extremely complex and small three-dimensional anatomical structures, and it is important to avoid damaging the corresponding structures when performing surgery. The spatial location of the relevant anatomical tissues within the target area needs to be determined using CT prior to the procedure. Considering that the target structures are too small and complex, the time required for manual segmentation is too long, and it is extremely challenging to segment the temporal bone and its nearby anatomical structures quickly and accurately. To overcome this difficulty, we propose a deep learning-based algorithm, a 3D network model for automatic segmentation of multi-structural targets in temporal bone CT that can automatically segment the cochlea, facial nerve, auditory tubercle, vestibule and semicircular canal. The algorithm combines CNN and Transformer for feature extraction and takes advantage of spatial attention and channel attention mechanisms to further improve the segmentation effect, the experimental results comparing with the results of various existing segmentation algorithms show that the dice similarity scores, Jaccard coefficients of all targets anatomical structures are significantly higher while HD95 and ASSD scores are lower, effectively proving that our method outperforms other advanced methods.</abstract><doi>10.48550/arxiv.2211.07143</doi><oa>free_for_read</oa></addata></record>
fulltext fulltext_linktorsrc
identifier DOI: 10.48550/arxiv.2211.07143
ispartof
issn
language eng
recordid cdi_arxiv_primary_2211_07143
source arXiv.org
subjects Computer Science - Computer Vision and Pattern Recognition
title WSC-Trans: A 3D network model for automatic multi-structural segmentation of temporal bone CT
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-11T18%3A03%3A07IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-arxiv_GOX&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=WSC-Trans:%20A%203D%20network%20model%20for%20automatic%20multi-structural%20segmentation%20of%20temporal%20bone%20CT&rft.au=Hua,%20Xin&rft.date=2022-11-14&rft_id=info:doi/10.48550/arxiv.2211.07143&rft_dat=%3Carxiv_GOX%3E2211_07143%3C/arxiv_GOX%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true