Towards rational glyco-engineering in CHO: from data to predictive models

Metabolic modeling strives to develop modeling approaches that are robust and highly predictive. To achieve this, various modeling designs, including hybrid models, and parameter estimation methods that define the type and number of parameters used in the model, are adapted. Accurate input data play...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Hauptverfasser: Štor, Jerneja, Ruckerbauer, David E, Széliova, Diana, Zanghellini, Jürgen, Borth, Nicole
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext bestellen
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page
container_issue
container_start_page
container_title
container_volume
creator Štor, Jerneja
Ruckerbauer, David E
Széliova, Diana
Zanghellini, Jürgen
Borth, Nicole
description Metabolic modeling strives to develop modeling approaches that are robust and highly predictive. To achieve this, various modeling designs, including hybrid models, and parameter estimation methods that define the type and number of parameters used in the model, are adapted. Accurate input data play an important role so that the selection of experimental methods that provide input data of the required precision with low measurement errors is crucial. For the biopharmaceutically relevant protein glycosylation, the most prominent available models are kinetic models which are able to capture the dynamic nature of protein N-glycosylation. In this review we focus on how to choose the most suitable model for a specific research question, as well as on parameters and considerations to take into account before planning relevant experiments.
doi_str_mv 10.48550/arxiv.2104.11624
format Article
fullrecord <record><control><sourceid>arxiv_GOX</sourceid><recordid>TN_cdi_arxiv_primary_2104_11624</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2104_11624</sourcerecordid><originalsourceid>FETCH-LOGICAL-a674-2fdb944909f47cc08c7ec59de8b575912404c5a4af13286ad69a7581771883403</originalsourceid><addsrcrecordid>eNotz71OwzAUQGEvHVDLAzDhF0iwnevYZkMR0EqVumSPbv0TWUrsyokKfXtEYTrbkT5CnjirQUvJXrB8x2stOIOa81bAAzn0-QuLW2jBNeaEEx2nm82VT2NM3peYRhoT7fanVxpKnqnDFema6aV4F-0ar57O2flp2ZFNwGnxj__dkv7jve_21fH0eejejhW2CioR3NkAGGYCKGuZtspbaZzXZ6mk4QIYWImAgTdCt-hag0pqrhTXugHWbMnz3_ZuGS4lzlhuw69puJuaH7NuRes</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Towards rational glyco-engineering in CHO: from data to predictive models</title><source>arXiv.org</source><creator>Štor, Jerneja ; Ruckerbauer, David E ; Széliova, Diana ; Zanghellini, Jürgen ; Borth, Nicole</creator><creatorcontrib>Štor, Jerneja ; Ruckerbauer, David E ; Széliova, Diana ; Zanghellini, Jürgen ; Borth, Nicole</creatorcontrib><description>Metabolic modeling strives to develop modeling approaches that are robust and highly predictive. To achieve this, various modeling designs, including hybrid models, and parameter estimation methods that define the type and number of parameters used in the model, are adapted. Accurate input data play an important role so that the selection of experimental methods that provide input data of the required precision with low measurement errors is crucial. For the biopharmaceutically relevant protein glycosylation, the most prominent available models are kinetic models which are able to capture the dynamic nature of protein N-glycosylation. In this review we focus on how to choose the most suitable model for a specific research question, as well as on parameters and considerations to take into account before planning relevant experiments.</description><identifier>DOI: 10.48550/arxiv.2104.11624</identifier><language>eng</language><subject>Quantitative Biology - Biomolecules ; Quantitative Biology - Molecular Networks</subject><creationdate>2021-04</creationdate><rights>http://creativecommons.org/licenses/by/4.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,777,882</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/2104.11624$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.2104.11624$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>Štor, Jerneja</creatorcontrib><creatorcontrib>Ruckerbauer, David E</creatorcontrib><creatorcontrib>Széliova, Diana</creatorcontrib><creatorcontrib>Zanghellini, Jürgen</creatorcontrib><creatorcontrib>Borth, Nicole</creatorcontrib><title>Towards rational glyco-engineering in CHO: from data to predictive models</title><description>Metabolic modeling strives to develop modeling approaches that are robust and highly predictive. To achieve this, various modeling designs, including hybrid models, and parameter estimation methods that define the type and number of parameters used in the model, are adapted. Accurate input data play an important role so that the selection of experimental methods that provide input data of the required precision with low measurement errors is crucial. For the biopharmaceutically relevant protein glycosylation, the most prominent available models are kinetic models which are able to capture the dynamic nature of protein N-glycosylation. In this review we focus on how to choose the most suitable model for a specific research question, as well as on parameters and considerations to take into account before planning relevant experiments.</description><subject>Quantitative Biology - Biomolecules</subject><subject>Quantitative Biology - Molecular Networks</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNotz71OwzAUQGEvHVDLAzDhF0iwnevYZkMR0EqVumSPbv0TWUrsyokKfXtEYTrbkT5CnjirQUvJXrB8x2stOIOa81bAAzn0-QuLW2jBNeaEEx2nm82VT2NM3peYRhoT7fanVxpKnqnDFema6aV4F-0ar57O2flp2ZFNwGnxj__dkv7jve_21fH0eejejhW2CioR3NkAGGYCKGuZtspbaZzXZ6mk4QIYWImAgTdCt-hag0pqrhTXugHWbMnz3_ZuGS4lzlhuw69puJuaH7NuRes</recordid><startdate>20210423</startdate><enddate>20210423</enddate><creator>Štor, Jerneja</creator><creator>Ruckerbauer, David E</creator><creator>Széliova, Diana</creator><creator>Zanghellini, Jürgen</creator><creator>Borth, Nicole</creator><scope>ALC</scope><scope>GOX</scope></search><sort><creationdate>20210423</creationdate><title>Towards rational glyco-engineering in CHO: from data to predictive models</title><author>Štor, Jerneja ; Ruckerbauer, David E ; Széliova, Diana ; Zanghellini, Jürgen ; Borth, Nicole</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a674-2fdb944909f47cc08c7ec59de8b575912404c5a4af13286ad69a7581771883403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Quantitative Biology - Biomolecules</topic><topic>Quantitative Biology - Molecular Networks</topic><toplevel>online_resources</toplevel><creatorcontrib>Štor, Jerneja</creatorcontrib><creatorcontrib>Ruckerbauer, David E</creatorcontrib><creatorcontrib>Széliova, Diana</creatorcontrib><creatorcontrib>Zanghellini, Jürgen</creatorcontrib><creatorcontrib>Borth, Nicole</creatorcontrib><collection>arXiv Quantitative Biology</collection><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Štor, Jerneja</au><au>Ruckerbauer, David E</au><au>Széliova, Diana</au><au>Zanghellini, Jürgen</au><au>Borth, Nicole</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Towards rational glyco-engineering in CHO: from data to predictive models</atitle><date>2021-04-23</date><risdate>2021</risdate><abstract>Metabolic modeling strives to develop modeling approaches that are robust and highly predictive. To achieve this, various modeling designs, including hybrid models, and parameter estimation methods that define the type and number of parameters used in the model, are adapted. Accurate input data play an important role so that the selection of experimental methods that provide input data of the required precision with low measurement errors is crucial. For the biopharmaceutically relevant protein glycosylation, the most prominent available models are kinetic models which are able to capture the dynamic nature of protein N-glycosylation. In this review we focus on how to choose the most suitable model for a specific research question, as well as on parameters and considerations to take into account before planning relevant experiments.</abstract><doi>10.48550/arxiv.2104.11624</doi><oa>free_for_read</oa></addata></record>
fulltext fulltext_linktorsrc
identifier DOI: 10.48550/arxiv.2104.11624
ispartof
issn
language eng
recordid cdi_arxiv_primary_2104_11624
source arXiv.org
subjects Quantitative Biology - Biomolecules
Quantitative Biology - Molecular Networks
title Towards rational glyco-engineering in CHO: from data to predictive models
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-17T23%3A55%3A03IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-arxiv_GOX&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Towards%20rational%20glyco-engineering%20in%20CHO:%20from%20data%20to%20predictive%20models&rft.au=%C5%A0tor,%20Jerneja&rft.date=2021-04-23&rft_id=info:doi/10.48550/arxiv.2104.11624&rft_dat=%3Carxiv_GOX%3E2104_11624%3C/arxiv_GOX%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true