Epidemic mitigation by statistical inference from contact tracing data
Contact-tracing is an essential tool in order to mitigate the impact of pandemic such as the COVID-19. In order to achieve efficient and scalable contact-tracing in real time, digital devices can play an important role. While a lot of attention has been paid to analyzing the privacy and ethical risk...
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creator | Baker, Antoine Biazzo, Indaco Braunstein, Alfredo Catania, Giovanni Dall'Asta, Luca Ingrosso, Alessandro Krzakala, Florent Mazza, Fabio Mézard, Marc Muntoni, Anna Paola Refinetti, Maria Stefano Sarao Mannelli Zdeborová, Lenka |
description | Contact-tracing is an essential tool in order to mitigate the impact of pandemic such as the COVID-19. In order to achieve efficient and scalable contact-tracing in real time, digital devices can play an important role. While a lot of attention has been paid to analyzing the privacy and ethical risks of the associated mobile applications, so far much less research has been devoted to optimizing their performance and assessing their impact on the mitigation of the epidemic. We develop Bayesian inference methods to estimate the risk that an individual is infected. This inference is based on the list of his recent contacts and their own risk levels, as well as personal information such as results of tests or presence of syndromes. We propose to use probabilistic risk estimation in order to optimize testing and quarantining strategies for the control of an epidemic. Our results show that in some range of epidemic spreading (typically when the manual tracing of all contacts of infected people becomes practically impossible, but before the fraction of infected people reaches the scale where a lock-down becomes unavoidable), this inference of individuals at risk could be an efficient way to mitigate the epidemic. Our approaches translate into fully distributed algorithms that only require communication between individuals who have recently been in contact. Such communication may be encrypted and anonymized and thus compatible with privacy preserving standards. We conclude that probabilistic risk estimation is capable to enhance performance of digital contact tracing and should be considered in the currently developed mobile applications. |
doi_str_mv | 10.48550/arxiv.2009.09422 |
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In order to achieve efficient and scalable contact-tracing in real time, digital devices can play an important role. While a lot of attention has been paid to analyzing the privacy and ethical risks of the associated mobile applications, so far much less research has been devoted to optimizing their performance and assessing their impact on the mitigation of the epidemic. We develop Bayesian inference methods to estimate the risk that an individual is infected. This inference is based on the list of his recent contacts and their own risk levels, as well as personal information such as results of tests or presence of syndromes. We propose to use probabilistic risk estimation in order to optimize testing and quarantining strategies for the control of an epidemic. Our results show that in some range of epidemic spreading (typically when the manual tracing of all contacts of infected people becomes practically impossible, but before the fraction of infected people reaches the scale where a lock-down becomes unavoidable), this inference of individuals at risk could be an efficient way to mitigate the epidemic. Our approaches translate into fully distributed algorithms that only require communication between individuals who have recently been in contact. Such communication may be encrypted and anonymized and thus compatible with privacy preserving standards. We conclude that probabilistic risk estimation is capable to enhance performance of digital contact tracing and should be considered in the currently developed mobile applications.</description><identifier>EISSN: 2331-8422</identifier><identifier>DOI: 10.48550/arxiv.2009.09422</identifier><language>eng</language><publisher>Ithaca: Cornell University Library, arXiv.org</publisher><subject>Algorithms ; Applications programs ; Bayesian analysis ; Computer Science - Artificial Intelligence ; Computer Science - Learning ; Contact tracing ; COVID-19 ; Disease control ; Epidemics ; Mobile computing ; Optimization ; Physics - Statistical Mechanics ; Privacy ; Quantitative Biology - Populations and Evolution ; Risk levels ; Statistical analysis ; Statistical inference</subject><ispartof>arXiv.org, 2020-09</ispartof><rights>2020. This work is published under http://arxiv.org/licenses/nonexclusive-distrib/1.0/ (the “License”). 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Our results show that in some range of epidemic spreading (typically when the manual tracing of all contacts of infected people becomes practically impossible, but before the fraction of infected people reaches the scale where a lock-down becomes unavoidable), this inference of individuals at risk could be an efficient way to mitigate the epidemic. Our approaches translate into fully distributed algorithms that only require communication between individuals who have recently been in contact. Such communication may be encrypted and anonymized and thus compatible with privacy preserving standards. We conclude that probabilistic risk estimation is capable to enhance performance of digital contact tracing and should be considered in the currently developed mobile applications.</description><subject>Algorithms</subject><subject>Applications programs</subject><subject>Bayesian analysis</subject><subject>Computer Science - Artificial Intelligence</subject><subject>Computer Science - Learning</subject><subject>Contact tracing</subject><subject>COVID-19</subject><subject>Disease control</subject><subject>Epidemics</subject><subject>Mobile computing</subject><subject>Optimization</subject><subject>Physics - Statistical Mechanics</subject><subject>Privacy</subject><subject>Quantitative Biology - Populations and Evolution</subject><subject>Risk levels</subject><subject>Statistical analysis</subject><subject>Statistical inference</subject><issn>2331-8422</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><sourceid>GOX</sourceid><recordid>eNotj8FKw0AURQdBsNR-gCsHXCe-vJlJMksprQoFF7oPL5OXMqVJ6mQq9u-NbVf3LC6Xe4R4yCDVpTHwTOHX_6QIYFOwGvFGzFCpLCknvhOLcdwBAOYFGqNmYr06-IY772Tno99S9EMv65Mc44Rj9I720vctB-4dyzYMnXRDH8lFGQM5329lQ5HuxW1L-5EX15yLz_Xqa_mWbD5e35cvm4QMmqSprXWAbMusyZRFaqkwimtjmxy4dTlmDIqN1eCwVE3rMlVrx4QKgWs1F4-X1bNjdQi-o3Cq_l2rs-vUeLo0DmH4PvIYq91wDP10qUKtdaE0glF_fBFXYg</recordid><startdate>20200920</startdate><enddate>20200920</enddate><creator>Baker, Antoine</creator><creator>Biazzo, Indaco</creator><creator>Braunstein, Alfredo</creator><creator>Catania, Giovanni</creator><creator>Dall'Asta, Luca</creator><creator>Ingrosso, Alessandro</creator><creator>Krzakala, Florent</creator><creator>Mazza, Fabio</creator><creator>Mézard, Marc</creator><creator>Muntoni, Anna Paola</creator><creator>Refinetti, Maria</creator><creator>Stefano Sarao Mannelli</creator><creator>Zdeborová, Lenka</creator><general>Cornell University Library, arXiv.org</general><scope>8FE</scope><scope>8FG</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>CCPQU</scope><scope>COVID</scope><scope>DWQXO</scope><scope>HCIFZ</scope><scope>L6V</scope><scope>M7S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>AKY</scope><scope>ALC</scope><scope>GOX</scope></search><sort><creationdate>20200920</creationdate><title>Epidemic mitigation by statistical inference from contact tracing data</title><author>Baker, Antoine ; Biazzo, Indaco ; Braunstein, Alfredo ; Catania, Giovanni ; Dall'Asta, Luca ; Ingrosso, Alessandro ; Krzakala, Florent ; Mazza, Fabio ; Mézard, Marc ; Muntoni, Anna Paola ; Refinetti, Maria ; Stefano Sarao Mannelli ; Zdeborová, Lenka</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a525-db99c02e981d1392afa753eb59d60efc621e03e5940c283dfc13b4cea2320eb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Algorithms</topic><topic>Applications programs</topic><topic>Bayesian analysis</topic><topic>Computer Science - Artificial Intelligence</topic><topic>Computer Science - Learning</topic><topic>Contact tracing</topic><topic>COVID-19</topic><topic>Disease control</topic><topic>Epidemics</topic><topic>Mobile computing</topic><topic>Optimization</topic><topic>Physics - Statistical Mechanics</topic><topic>Privacy</topic><topic>Quantitative Biology - Populations and Evolution</topic><topic>Risk levels</topic><topic>Statistical analysis</topic><topic>Statistical inference</topic><toplevel>online_resources</toplevel><creatorcontrib>Baker, Antoine</creatorcontrib><creatorcontrib>Biazzo, Indaco</creatorcontrib><creatorcontrib>Braunstein, Alfredo</creatorcontrib><creatorcontrib>Catania, Giovanni</creatorcontrib><creatorcontrib>Dall'Asta, Luca</creatorcontrib><creatorcontrib>Ingrosso, Alessandro</creatorcontrib><creatorcontrib>Krzakala, Florent</creatorcontrib><creatorcontrib>Mazza, Fabio</creatorcontrib><creatorcontrib>Mézard, Marc</creatorcontrib><creatorcontrib>Muntoni, Anna Paola</creatorcontrib><creatorcontrib>Refinetti, Maria</creatorcontrib><creatorcontrib>Stefano Sarao Mannelli</creatorcontrib><creatorcontrib>Zdeborová, Lenka</creatorcontrib><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection (ProQuest)</collection><collection>ProQuest One Community College</collection><collection>Coronavirus Research Database</collection><collection>ProQuest Central Korea</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Engineering Collection</collection><collection>Engineering Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>arXiv Computer Science</collection><collection>arXiv Quantitative Biology</collection><collection>arXiv.org</collection><jtitle>arXiv.org</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Baker, Antoine</au><au>Biazzo, Indaco</au><au>Braunstein, Alfredo</au><au>Catania, Giovanni</au><au>Dall'Asta, Luca</au><au>Ingrosso, Alessandro</au><au>Krzakala, Florent</au><au>Mazza, Fabio</au><au>Mézard, Marc</au><au>Muntoni, Anna Paola</au><au>Refinetti, Maria</au><au>Stefano Sarao Mannelli</au><au>Zdeborová, Lenka</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Epidemic mitigation by statistical inference from contact tracing data</atitle><jtitle>arXiv.org</jtitle><date>2020-09-20</date><risdate>2020</risdate><eissn>2331-8422</eissn><abstract>Contact-tracing is an essential tool in order to mitigate the impact of pandemic such as the COVID-19. In order to achieve efficient and scalable contact-tracing in real time, digital devices can play an important role. While a lot of attention has been paid to analyzing the privacy and ethical risks of the associated mobile applications, so far much less research has been devoted to optimizing their performance and assessing their impact on the mitigation of the epidemic. We develop Bayesian inference methods to estimate the risk that an individual is infected. This inference is based on the list of his recent contacts and their own risk levels, as well as personal information such as results of tests or presence of syndromes. We propose to use probabilistic risk estimation in order to optimize testing and quarantining strategies for the control of an epidemic. Our results show that in some range of epidemic spreading (typically when the manual tracing of all contacts of infected people becomes practically impossible, but before the fraction of infected people reaches the scale where a lock-down becomes unavoidable), this inference of individuals at risk could be an efficient way to mitigate the epidemic. Our approaches translate into fully distributed algorithms that only require communication between individuals who have recently been in contact. Such communication may be encrypted and anonymized and thus compatible with privacy preserving standards. We conclude that probabilistic risk estimation is capable to enhance performance of digital contact tracing and should be considered in the currently developed mobile applications.</abstract><cop>Ithaca</cop><pub>Cornell University Library, arXiv.org</pub><doi>10.48550/arxiv.2009.09422</doi><oa>free_for_read</oa></addata></record> |
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subjects | Algorithms Applications programs Bayesian analysis Computer Science - Artificial Intelligence Computer Science - Learning Contact tracing COVID-19 Disease control Epidemics Mobile computing Optimization Physics - Statistical Mechanics Privacy Quantitative Biology - Populations and Evolution Risk levels Statistical analysis Statistical inference |
title | Epidemic mitigation by statistical inference from contact tracing data |
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