PClean: Bayesian Data Cleaning at Scale with Domain-Specific Probabilistic Programming
AISTATS 2021 Data cleaning is naturally framed as probabilistic inference in a generative model of ground-truth data and likely errors, but the diversity of real-world error patterns and the hardness of inference make Bayesian approaches difficult to automate. We present PClean, a probabilistic prog...
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creator | Lew, Alexander K Agrawal, Monica Sontag, David Mansinghka, Vikash K |
description | AISTATS 2021 Data cleaning is naturally framed as probabilistic inference in a generative
model of ground-truth data and likely errors, but the diversity of real-world
error patterns and the hardness of inference make Bayesian approaches difficult
to automate. We present PClean, a probabilistic programming language (PPL) for
leveraging dataset-specific knowledge to automate Bayesian cleaning. Compared
to general-purpose PPLs, PClean tackles a restricted problem domain, enabling
three modeling and inference innovations: (1) a non-parametric model of
relational database instances, which users' programs customize; (2) a novel
sequential Monte Carlo inference algorithm that exploits the structure of
PClean's model class; and (3) a compiler that generates near-optimal SMC
proposals and blocked-Gibbs rejuvenation kernels based on the user's model and
data. We show empirically that short (< 50-line) PClean programs can: be faster
and more accurate than generic PPL inference on data-cleaning benchmarks; match
state-of-the-art data-cleaning systems in terms of accuracy and runtime (unlike
generic PPL inference in the same runtime); and scale to real-world datasets
with millions of records. |
doi_str_mv | 10.48550/arxiv.2007.11838 |
format | Article |
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model of ground-truth data and likely errors, but the diversity of real-world
error patterns and the hardness of inference make Bayesian approaches difficult
to automate. We present PClean, a probabilistic programming language (PPL) for
leveraging dataset-specific knowledge to automate Bayesian cleaning. Compared
to general-purpose PPLs, PClean tackles a restricted problem domain, enabling
three modeling and inference innovations: (1) a non-parametric model of
relational database instances, which users' programs customize; (2) a novel
sequential Monte Carlo inference algorithm that exploits the structure of
PClean's model class; and (3) a compiler that generates near-optimal SMC
proposals and blocked-Gibbs rejuvenation kernels based on the user's model and
data. We show empirically that short (< 50-line) PClean programs can: be faster
and more accurate than generic PPL inference on data-cleaning benchmarks; match
state-of-the-art data-cleaning systems in terms of accuracy and runtime (unlike
generic PPL inference in the same runtime); and scale to real-world datasets
with millions of records.</description><identifier>DOI: 10.48550/arxiv.2007.11838</identifier><language>eng</language><subject>Computer Science - Artificial Intelligence ; Computer Science - Learning ; Statistics - Computation ; Statistics - Machine Learning</subject><creationdate>2020-07</creationdate><rights>http://creativecommons.org/licenses/by/4.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,780,885</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/2007.11838$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.2007.11838$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>Lew, Alexander K</creatorcontrib><creatorcontrib>Agrawal, Monica</creatorcontrib><creatorcontrib>Sontag, David</creatorcontrib><creatorcontrib>Mansinghka, Vikash K</creatorcontrib><title>PClean: Bayesian Data Cleaning at Scale with Domain-Specific Probabilistic Programming</title><description>AISTATS 2021 Data cleaning is naturally framed as probabilistic inference in a generative
model of ground-truth data and likely errors, but the diversity of real-world
error patterns and the hardness of inference make Bayesian approaches difficult
to automate. We present PClean, a probabilistic programming language (PPL) for
leveraging dataset-specific knowledge to automate Bayesian cleaning. Compared
to general-purpose PPLs, PClean tackles a restricted problem domain, enabling
three modeling and inference innovations: (1) a non-parametric model of
relational database instances, which users' programs customize; (2) a novel
sequential Monte Carlo inference algorithm that exploits the structure of
PClean's model class; and (3) a compiler that generates near-optimal SMC
proposals and blocked-Gibbs rejuvenation kernels based on the user's model and
data. We show empirically that short (< 50-line) PClean programs can: be faster
and more accurate than generic PPL inference on data-cleaning benchmarks; match
state-of-the-art data-cleaning systems in terms of accuracy and runtime (unlike
generic PPL inference in the same runtime); and scale to real-world datasets
with millions of records.</description><subject>Computer Science - Artificial Intelligence</subject><subject>Computer Science - Learning</subject><subject>Statistics - Computation</subject><subject>Statistics - Machine Learning</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNotj81OwzAQhH3hgAoPwAm_QIId2_WGG6T8VKpEpaBeo7VrtyslaeVEQN-eknIazWhmpI-xOylyDcaIB0w_9JUXQthcSlBwzTbrqg3YP_JnPIWBsOcLHJFPIfU7jiOvPbaBf9O454tDh9Rn9TF4iuT5Oh0cOmppGC9ul7DrzrsbdhWxHcLtv85Y_fryWb1nq4-3ZfW0ynBuIXMgnMUCwEMhlHBoY7k1XslCCXQaXQQLZYxSBgwASodSmy0oMzfan0szdn95nbiaY6IO06n542smPvULZFlKkA</recordid><startdate>20200723</startdate><enddate>20200723</enddate><creator>Lew, Alexander K</creator><creator>Agrawal, Monica</creator><creator>Sontag, David</creator><creator>Mansinghka, Vikash K</creator><scope>AKY</scope><scope>EPD</scope><scope>GOX</scope></search><sort><creationdate>20200723</creationdate><title>PClean: Bayesian Data Cleaning at Scale with Domain-Specific Probabilistic Programming</title><author>Lew, Alexander K ; Agrawal, Monica ; Sontag, David ; Mansinghka, Vikash K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a678-b80b7a288c82030ba7f9d5c31230ab4abf8789ff11eae8834e945d835654c123</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Computer Science - Artificial Intelligence</topic><topic>Computer Science - Learning</topic><topic>Statistics - Computation</topic><topic>Statistics - Machine Learning</topic><toplevel>online_resources</toplevel><creatorcontrib>Lew, Alexander K</creatorcontrib><creatorcontrib>Agrawal, Monica</creatorcontrib><creatorcontrib>Sontag, David</creatorcontrib><creatorcontrib>Mansinghka, Vikash K</creatorcontrib><collection>arXiv Computer Science</collection><collection>arXiv Statistics</collection><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Lew, Alexander K</au><au>Agrawal, Monica</au><au>Sontag, David</au><au>Mansinghka, Vikash K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>PClean: Bayesian Data Cleaning at Scale with Domain-Specific Probabilistic Programming</atitle><date>2020-07-23</date><risdate>2020</risdate><abstract>AISTATS 2021 Data cleaning is naturally framed as probabilistic inference in a generative
model of ground-truth data and likely errors, but the diversity of real-world
error patterns and the hardness of inference make Bayesian approaches difficult
to automate. We present PClean, a probabilistic programming language (PPL) for
leveraging dataset-specific knowledge to automate Bayesian cleaning. Compared
to general-purpose PPLs, PClean tackles a restricted problem domain, enabling
three modeling and inference innovations: (1) a non-parametric model of
relational database instances, which users' programs customize; (2) a novel
sequential Monte Carlo inference algorithm that exploits the structure of
PClean's model class; and (3) a compiler that generates near-optimal SMC
proposals and blocked-Gibbs rejuvenation kernels based on the user's model and
data. We show empirically that short (< 50-line) PClean programs can: be faster
and more accurate than generic PPL inference on data-cleaning benchmarks; match
state-of-the-art data-cleaning systems in terms of accuracy and runtime (unlike
generic PPL inference in the same runtime); and scale to real-world datasets
with millions of records.</abstract><doi>10.48550/arxiv.2007.11838</doi><oa>free_for_read</oa></addata></record> |
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subjects | Computer Science - Artificial Intelligence Computer Science - Learning Statistics - Computation Statistics - Machine Learning |
title | PClean: Bayesian Data Cleaning at Scale with Domain-Specific Probabilistic Programming |
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