A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes
The physical chemistry of liquid-liquid phase separation (LLPS) of polymer solutions bears directly on the assembly of biologically functional droplet-like bodies from proteins and nucleic acids. These biomolecular condensates include certain extracellular materials, and intracellular compartments t...
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description | The physical chemistry of liquid-liquid phase separation (LLPS) of polymer solutions bears directly on the assembly of biologically functional droplet-like bodies from proteins and nucleic acids. These biomolecular condensates include certain extracellular materials, and intracellular compartments that are characterized as "membraneless organelles". Analytical theories are a valuable, computationally efficient tool for addressing general principles. LLPS of neutral homopolymers are quite well described by theory; but it has been a challenge to develop general theories for the LLPS of heteropolymers involving charge-charge interactions. Here we present a novel theory that combines a random-phase-approximation treatment of polymer density fluctuations and an account of intrachain conformational heterogeneity based upon renormalized Kuhn lengths to provide predictions of LLPS properties as a function of pH, salt, and charge patterning along the chain sequence. Advancing beyond more limited analytical approaches, our LLPS theory is applicable to a wide variety of charged sequences ranging from highly charged polyelectrolytes to neutral or nearly neutral polyampholytes. The new theory should be useful in high-throughput screening of protein and other sequences for their LLPS propensities and can serve as a basis for more comprehensive theories that incorporate non-electrostatic interactions. Experimental ramifications of our theory are discussed. |
doi_str_mv | 10.48550/arxiv.1908.09726 |
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Experimental ramifications of our theory are discussed.</description><subject>Liquid phases</subject><subject>Nucleic acids</subject><subject>Organelles</subject><subject>Organic chemistry</subject><subject>Phase separation</subject><subject>Physical chemistry</subject><subject>Physics - Soft Condensed Matter</subject><subject>Polyampholytes</subject><subject>Polyelectrolytes</subject><subject>Polymers</subject><subject>Proteins</subject><subject>Quantitative Biology - Biomolecules</subject><subject>Variations</subject><issn>2331-8422</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GOX</sourceid><recordid>eNotkM1qwzAQhEWh0JDmAXqqoGensmQp0jGE_kGgl9zNWl5hBydyJSfUffoqTg7LLsvMwHyEPOVsWWgp2SuE3_a8zA3TS2ZWXN2RGRciz3TB-QNZxLhnjHG14lKKGflb09OxdS3WFI7QjUNroaNDgz6M1Dva4IDB974bDxgidT7QiD8nPFrMYo82WS3tG4hIK2zg3PqkSr6LAzu0Q0jHgDGl19MTDn1zfT2SewddxMVtz8nu_W23-cy23x9fm_U2A8mLjFdKCcXAaGYKJqWxCFpVFa-5BLESWGgwyGqTW5MaapcbLlwlnbZS5kKIOXm-xk5gyj60BwhjeQFUToCS4uWq6INP1eJQ7v0pJBqxTIHMpFGF-Ad9FGtF</recordid><startdate>20200109</startdate><enddate>20200109</enddate><creator>Lin, Yi-Hsuan</creator><creator>Brady, Jacob P</creator><creator>Hue Sun Chan</creator><creator>Ghosh, Kingshuk</creator><general>Cornell University Library, arXiv.org</general><scope>8FE</scope><scope>8FG</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>HCIFZ</scope><scope>L6V</scope><scope>M7S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>ALC</scope><scope>GOX</scope></search><sort><creationdate>20200109</creationdate><title>A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes</title><author>Lin, Yi-Hsuan ; Brady, Jacob P ; Hue Sun Chan ; Ghosh, Kingshuk</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a524-2b66360a980940559cea86bb2d25a373e48a9e0d91c94228f1923fb5f8c551333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Liquid phases</topic><topic>Nucleic acids</topic><topic>Organelles</topic><topic>Organic chemistry</topic><topic>Phase separation</topic><topic>Physical chemistry</topic><topic>Physics - Soft Condensed Matter</topic><topic>Polyampholytes</topic><topic>Polyelectrolytes</topic><topic>Polymers</topic><topic>Proteins</topic><topic>Quantitative Biology - Biomolecules</topic><topic>Variations</topic><toplevel>online_resources</toplevel><creatorcontrib>Lin, Yi-Hsuan</creatorcontrib><creatorcontrib>Brady, Jacob P</creatorcontrib><creatorcontrib>Hue Sun Chan</creatorcontrib><creatorcontrib>Ghosh, Kingshuk</creatorcontrib><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Engineering Collection</collection><collection>Engineering Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>arXiv Quantitative Biology</collection><collection>arXiv.org</collection><jtitle>arXiv.org</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Yi-Hsuan</au><au>Brady, Jacob P</au><au>Hue Sun Chan</au><au>Ghosh, Kingshuk</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes</atitle><jtitle>arXiv.org</jtitle><date>2020-01-09</date><risdate>2020</risdate><eissn>2331-8422</eissn><abstract>The physical chemistry of liquid-liquid phase separation (LLPS) of polymer solutions bears directly on the assembly of biologically functional droplet-like bodies from proteins and nucleic acids. 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subjects | Liquid phases Nucleic acids Organelles Organic chemistry Phase separation Physical chemistry Physics - Soft Condensed Matter Polyampholytes Polyelectrolytes Polymers Proteins Quantitative Biology - Biomolecules Variations |
title | A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes |
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