Class-Aware Adversarial Lung Nodule Synthesis in CT Images
Though large-scale datasets are essential for training deep learning systems, it is expensive to scale up the collection of medical imaging datasets. Synthesizing the objects of interests, such as lung nodules, in medical images based on the distribution of annotated datasets can be helpful for impr...
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creator | Yang, Jie Liu, Siqi Grbic, Sasa Setio, Arnaud Arindra Adiyoso Xu, Zhoubing Gibson, Eli Chabin, Guillaume Georgescu, Bogdan Laine, Andrew F Comaniciu, Dorin |
description | Though large-scale datasets are essential for training deep learning systems,
it is expensive to scale up the collection of medical imaging datasets.
Synthesizing the objects of interests, such as lung nodules, in medical images
based on the distribution of annotated datasets can be helpful for improving
the supervised learning tasks, especially when the datasets are limited by size
and class balance. In this paper, we propose the class-aware adversarial
synthesis framework to synthesize lung nodules in CT images. The framework is
built with a coarse-to-fine patch in-painter (generator) and two class-aware
discriminators. By conditioning on the random latent variables and the target
nodule labels, the trained networks are able to generate diverse nodules given
the same context. By evaluating on the public LIDC-IDRI dataset, we demonstrate
an example application of the proposed framework for improving the accuracy of
the lung nodule malignancy estimation as a binary classification problem, which
is important in the lung screening scenario. We show that combining the real
image patches and the synthetic lung nodules in the training set can improve
the mean AUC classification score across different network architectures by 2%. |
doi_str_mv | 10.48550/arxiv.1812.11204 |
format | Article |
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it is expensive to scale up the collection of medical imaging datasets.
Synthesizing the objects of interests, such as lung nodules, in medical images
based on the distribution of annotated datasets can be helpful for improving
the supervised learning tasks, especially when the datasets are limited by size
and class balance. In this paper, we propose the class-aware adversarial
synthesis framework to synthesize lung nodules in CT images. The framework is
built with a coarse-to-fine patch in-painter (generator) and two class-aware
discriminators. By conditioning on the random latent variables and the target
nodule labels, the trained networks are able to generate diverse nodules given
the same context. By evaluating on the public LIDC-IDRI dataset, we demonstrate
an example application of the proposed framework for improving the accuracy of
the lung nodule malignancy estimation as a binary classification problem, which
is important in the lung screening scenario. We show that combining the real
image patches and the synthetic lung nodules in the training set can improve
the mean AUC classification score across different network architectures by 2%.</description><identifier>DOI: 10.48550/arxiv.1812.11204</identifier><language>eng</language><subject>Computer Science - Computer Vision and Pattern Recognition</subject><creationdate>2018-12</creationdate><rights>http://arxiv.org/licenses/nonexclusive-distrib/1.0</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>228,230,780,885</link.rule.ids><linktorsrc>$$Uhttps://arxiv.org/abs/1812.11204$$EView_record_in_Cornell_University$$FView_record_in_$$GCornell_University$$Hfree_for_read</linktorsrc><backlink>$$Uhttps://doi.org/10.48550/arXiv.1812.11204$$DView paper in arXiv$$Hfree_for_read</backlink></links><search><creatorcontrib>Yang, Jie</creatorcontrib><creatorcontrib>Liu, Siqi</creatorcontrib><creatorcontrib>Grbic, Sasa</creatorcontrib><creatorcontrib>Setio, Arnaud Arindra Adiyoso</creatorcontrib><creatorcontrib>Xu, Zhoubing</creatorcontrib><creatorcontrib>Gibson, Eli</creatorcontrib><creatorcontrib>Chabin, Guillaume</creatorcontrib><creatorcontrib>Georgescu, Bogdan</creatorcontrib><creatorcontrib>Laine, Andrew F</creatorcontrib><creatorcontrib>Comaniciu, Dorin</creatorcontrib><title>Class-Aware Adversarial Lung Nodule Synthesis in CT Images</title><description>Though large-scale datasets are essential for training deep learning systems,
it is expensive to scale up the collection of medical imaging datasets.
Synthesizing the objects of interests, such as lung nodules, in medical images
based on the distribution of annotated datasets can be helpful for improving
the supervised learning tasks, especially when the datasets are limited by size
and class balance. In this paper, we propose the class-aware adversarial
synthesis framework to synthesize lung nodules in CT images. The framework is
built with a coarse-to-fine patch in-painter (generator) and two class-aware
discriminators. By conditioning on the random latent variables and the target
nodule labels, the trained networks are able to generate diverse nodules given
the same context. By evaluating on the public LIDC-IDRI dataset, we demonstrate
an example application of the proposed framework for improving the accuracy of
the lung nodule malignancy estimation as a binary classification problem, which
is important in the lung screening scenario. We show that combining the real
image patches and the synthetic lung nodules in the training set can improve
the mean AUC classification score across different network architectures by 2%.</description><subject>Computer Science - Computer Vision and Pattern Recognition</subject><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>GOX</sourceid><recordid>eNotj8tOwzAQAH3pARU-gBP-gQRvnLUdblHEo1LUHpp7tIm3xVKaIpsW-veIwmluoxkh7kHlpUNUjxS_wzkHB0UOUKjyRjw1E6WU1V8UWdb-zDFRDDTJ9jTv5froTxPL7WX-fOcUkgyzbDq5OtCe061Y7GhKfPfPpehenrvmLWs3r6umbjMytsx0Zb3RO-sUYOGtQkOWWZthGHGEURMQejU45AKQnXYVKV1Vlj0oBGP0Ujz8aa_x_UcMB4qX_neiv07oH3cIP9k</recordid><startdate>20181228</startdate><enddate>20181228</enddate><creator>Yang, Jie</creator><creator>Liu, Siqi</creator><creator>Grbic, Sasa</creator><creator>Setio, Arnaud Arindra Adiyoso</creator><creator>Xu, Zhoubing</creator><creator>Gibson, Eli</creator><creator>Chabin, Guillaume</creator><creator>Georgescu, Bogdan</creator><creator>Laine, Andrew F</creator><creator>Comaniciu, Dorin</creator><scope>AKY</scope><scope>GOX</scope></search><sort><creationdate>20181228</creationdate><title>Class-Aware Adversarial Lung Nodule Synthesis in CT Images</title><author>Yang, Jie ; Liu, Siqi ; Grbic, Sasa ; Setio, Arnaud Arindra Adiyoso ; Xu, Zhoubing ; Gibson, Eli ; Chabin, Guillaume ; Georgescu, Bogdan ; Laine, Andrew F ; Comaniciu, Dorin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a674-397d63f780152d7056a7ee36bbc5c1c3a1a5d0b85e215e8389a03997ed1051663</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Computer Science - Computer Vision and Pattern Recognition</topic><toplevel>online_resources</toplevel><creatorcontrib>Yang, Jie</creatorcontrib><creatorcontrib>Liu, Siqi</creatorcontrib><creatorcontrib>Grbic, Sasa</creatorcontrib><creatorcontrib>Setio, Arnaud Arindra Adiyoso</creatorcontrib><creatorcontrib>Xu, Zhoubing</creatorcontrib><creatorcontrib>Gibson, Eli</creatorcontrib><creatorcontrib>Chabin, Guillaume</creatorcontrib><creatorcontrib>Georgescu, Bogdan</creatorcontrib><creatorcontrib>Laine, Andrew F</creatorcontrib><creatorcontrib>Comaniciu, Dorin</creatorcontrib><collection>arXiv Computer Science</collection><collection>arXiv.org</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Yang, Jie</au><au>Liu, Siqi</au><au>Grbic, Sasa</au><au>Setio, Arnaud Arindra Adiyoso</au><au>Xu, Zhoubing</au><au>Gibson, Eli</au><au>Chabin, Guillaume</au><au>Georgescu, Bogdan</au><au>Laine, Andrew F</au><au>Comaniciu, Dorin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Class-Aware Adversarial Lung Nodule Synthesis in CT Images</atitle><date>2018-12-28</date><risdate>2018</risdate><abstract>Though large-scale datasets are essential for training deep learning systems,
it is expensive to scale up the collection of medical imaging datasets.
Synthesizing the objects of interests, such as lung nodules, in medical images
based on the distribution of annotated datasets can be helpful for improving
the supervised learning tasks, especially when the datasets are limited by size
and class balance. In this paper, we propose the class-aware adversarial
synthesis framework to synthesize lung nodules in CT images. The framework is
built with a coarse-to-fine patch in-painter (generator) and two class-aware
discriminators. By conditioning on the random latent variables and the target
nodule labels, the trained networks are able to generate diverse nodules given
the same context. By evaluating on the public LIDC-IDRI dataset, we demonstrate
an example application of the proposed framework for improving the accuracy of
the lung nodule malignancy estimation as a binary classification problem, which
is important in the lung screening scenario. We show that combining the real
image patches and the synthetic lung nodules in the training set can improve
the mean AUC classification score across different network architectures by 2%.</abstract><doi>10.48550/arxiv.1812.11204</doi><oa>free_for_read</oa></addata></record> |
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subjects | Computer Science - Computer Vision and Pattern Recognition |
title | Class-Aware Adversarial Lung Nodule Synthesis in CT Images |
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