Sensitivity of asymmetric rate-dependent critical systems to initial conditions: insights into cellular decision making
The work reported here aims to address the effects of time-dependent parameters and stochasticity on decision-making in biological systems. We achieve this by extending previous studies that resorted to simple normal forms. Yet, we focus primarily on the issue of the system's sensitivity to ini...
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description | The work reported here aims to address the effects of time-dependent parameters and stochasticity on decision-making in biological systems. We achieve this by extending previous studies that resorted to simple normal forms. Yet, we focus primarily on the issue of the system's sensitivity to initial conditions in the presence of different noise distributions. In addition, we assess the impact of two-way sweeping through the critical region of a canonical Pitchfork bifurcation with a constant external asymmetry. The parallel with decision-making in bio-circuits is performed on this simple system since it is equivalent in its available states and dynamics to more complex genetic circuits. Overall, we verify that rate-dependent effects are specific to particular initial conditions. Information processing for each starting state is affected by the balance between sweeping speed through critical regions, and the type of fluctuations added. For a heavy-tail noise, forward-reverse dynamic bifurcations are more efficient in processing the information contained in external signals, when compared to the system relying on escape dynamics, if it starts at an attractor not favoured by the asymmetry and, in conjunction, if the sweeping amplitude is large. |
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For a heavy-tail noise, forward-reverse dynamic bifurcations are more efficient in processing the information contained in external signals, when compared to the system relying on escape dynamics, if it starts at an attractor not favoured by the asymmetry and, in conjunction, if the sweeping amplitude is large.</description><subject>Asymmetry</subject><subject>Bifurcations</subject><subject>Circuits</subject><subject>Data processing</subject><subject>Decision making</subject><subject>Escape systems</subject><subject>Initial conditions</subject><subject>Quantitative Biology - Molecular Networks</subject><subject>Quantitative Biology - Quantitative Methods</subject><subject>Sensitivity</subject><subject>Signal processing</subject><subject>Sweeping</subject><subject>Time dependence</subject><subject>Variations</subject><issn>2331-8422</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><sourceid>GOX</sourceid><recordid>eNotkE1LAzEURYMgWGp_gCsDrqfmc9JxJ0WtUHBh98ObJFNTZzI1Savz742tq3c5HC6Pi9ANJXOxkJLcQ_hxxzldEDYntGTqAk0Y57RYCMau0CzGHSGElYpJySfo-9366JI7ujTiocUQx763KTiNAyRbGLu33lifsA5Z09DhOMZk-4jTgJ3PLCM9eJPT4ONDZtFtP1LMIRvadt2hg4CN1S5mA_fw6fz2Gl220EU7-79TtHl-2ixXxfrt5XX5uC5AMlKYkjW0UlRxaEVlgNMGpJBNwypiNTGcVwJ0K5SstCa8UpYIBlZyxVkLsuRTdHuuPa1S74PrIYz13zr1aZ1s3J2NfRi-Djamejccgs8_1YwoyqmoSsJ_ATT1als</recordid><startdate>20180205</startdate><enddate>20180205</enddate><creator>Nené, Nuno R</creator><creator>Rivington, James</creator><creator>Zaikin, Alexey</creator><general>Cornell University Library, arXiv.org</general><scope>8FE</scope><scope>8FG</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>HCIFZ</scope><scope>L6V</scope><scope>M7S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>ALC</scope><scope>GOX</scope></search><sort><creationdate>20180205</creationdate><title>Sensitivity of asymmetric rate-dependent critical systems to initial conditions: insights into cellular decision making</title><author>Nené, Nuno R ; Rivington, James ; Zaikin, Alexey</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a520-d62b197173af49da31ba545bb290ec0d3394acf4759cc0397e042ae53732fa563</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Asymmetry</topic><topic>Bifurcations</topic><topic>Circuits</topic><topic>Data processing</topic><topic>Decision making</topic><topic>Escape systems</topic><topic>Initial conditions</topic><topic>Quantitative Biology - Molecular Networks</topic><topic>Quantitative Biology - Quantitative Methods</topic><topic>Sensitivity</topic><topic>Signal processing</topic><topic>Sweeping</topic><topic>Time dependence</topic><topic>Variations</topic><toplevel>online_resources</toplevel><creatorcontrib>Nené, Nuno R</creatorcontrib><creatorcontrib>Rivington, James</creatorcontrib><creatorcontrib>Zaikin, Alexey</creatorcontrib><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Engineering Collection</collection><collection>Engineering Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>arXiv Quantitative Biology</collection><collection>arXiv.org</collection><jtitle>arXiv.org</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nené, Nuno R</au><au>Rivington, James</au><au>Zaikin, Alexey</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sensitivity of asymmetric rate-dependent critical systems to initial conditions: insights into cellular decision making</atitle><jtitle>arXiv.org</jtitle><date>2018-02-05</date><risdate>2018</risdate><eissn>2331-8422</eissn><abstract>The work reported here aims to address the effects of time-dependent parameters and stochasticity on decision-making in biological systems. We achieve this by extending previous studies that resorted to simple normal forms. Yet, we focus primarily on the issue of the system's sensitivity to initial conditions in the presence of different noise distributions. In addition, we assess the impact of two-way sweeping through the critical region of a canonical Pitchfork bifurcation with a constant external asymmetry. The parallel with decision-making in bio-circuits is performed on this simple system since it is equivalent in its available states and dynamics to more complex genetic circuits. Overall, we verify that rate-dependent effects are specific to particular initial conditions. Information processing for each starting state is affected by the balance between sweeping speed through critical regions, and the type of fluctuations added. 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subjects | Asymmetry Bifurcations Circuits Data processing Decision making Escape systems Initial conditions Quantitative Biology - Molecular Networks Quantitative Biology - Quantitative Methods Sensitivity Signal processing Sweeping Time dependence Variations |
title | Sensitivity of asymmetric rate-dependent critical systems to initial conditions: insights into cellular decision making |
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