Evaluating Variant Calling Tools for Non-Matched Next-Generation Sequencing Data von Sandmann, Sarah, de Graaf, Aniek O., Karimi, Mohsen, van der Reijden, Bert A., Hellström-Lindberg, Eva, Jansen, Joop H., Dugas, Martin

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appreci8: a pipeline for precise variant calling integrating 8 tools von Sandmann, Sarah, Karimi, Mohsen, de Graaf, Aniek O, Rohde, Christian, Göllner, Stefanie, Varghese, Julian, Ernsting, Jan, Walldin, Gunilla, van der Reijden, Bert A, Müller-Tidow, Carsten, Malcovati, Luca, Hellström-Lindberg, Eva, Jansen, Joop H, Dugas, Martin

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Multicenter Next-Generation Sequencing Studies between Theory and Practice: Harmonization of Data Analysis Using Real-World Myelodysplastic Syndrome Data von Sandmann, Sarah, de Graaf, Aniek O, Tobiasson, Magnus, Kosmider, Olivier, Abáigar, María, Clappier, Emmanuelle, Gallì, Anna, van der Reijden, Bert A, Malcovati, Luca, Fenaux, Pierre, Díez-Campelo, María, Fontenay, Michaela, Hellström-Lindberg, Eva, Jansen, Joop H, Dugas, Martin

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Somatic Mutations and DNA Hypermethylation at Enhancers and Promoters Identify Distinct Subtypes within Lower-Risk Myelodysplastic Syndromes von Rombaut, David, Tekath, Tobias, Sandmann, Sarah, Crouch, Simon, de Graaf, Aniek O., Kosmider, Olivier, Tobiasson, Magnus, Lennartsson, Andreas, Van der Reijden, Bert A., Park, Sophie, D'Aveni, Maud, Slama, Bohrane, Clappier, Emmanuelle, Fenaux, Pierre, Ades, Lionel, van de Loosdrecht, Arjan A., Langemeijer, Saskia MC, Symeonidis, Argiris S., Čermák, Jaroslav, Preudhomme, Claude, Savic, Aleksandar, Germing, Ulrich, Stauder, Reinhard, Bowen, David T., Van Marrewijk, Corine J., Bernard, Elsa, Smith, Alexandra, Painter, Daniel, de Witte, Theo J.M., Hellstrom Lindberg, Eva, Varghese, Julian, Dugas, Martin, Martens, Joost H.A., Malcovati, Luca, Jansen, Joop H., Fontenay, Michaela

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BCL-2/IgH Polymerase Chain Reaction Status at the End of Induction Treatment Is Not Predictive for Progression-Free Survival in Relapsed/Resistant Follicular Lymphoma: Results of a... von VAN OERS, Marinus H. J, TÖNNISSEN, Evelyn, HOLTE, Harald, HAGENBEEK, Anton, VAN DER REIJDEN, Bert A, VAN GLABBEKE, Martine, GIURGEA, Livia, JANSEN, Joop H, KLASA, Richard, MARCUS, Robert E, WOLF, Max, KIMBY, Eva, VRANOVSKY, Andrej

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Detection of CBP rearrangements in acute myelogenous leukemia with t(8;16) von GILES, R. H, DAUWERSE, J. G, VAN OMMEN, G.-J. B, HAGEMEIJER, A, VAN DER REIJDEN, B. A, BREUNING, M. H, HIGGINS, C, PETRIJ, F, WESSELS, J. W, BEVERSTOCK, G. C, DÖHNER, H, JOTTERAND-BELLOMO, M, FALKENBURG, J. H. F, SLATER, R. M

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Preferential expression of a high number of ATP binding cassette transporters in both normal and leukemic CD34+CD38− cells von de Grouw, E P L M, Raaijmakers, M H G P, Boezeman, J B, van der Reijden, B A, van de Locht, L T F, de Witte, T J M, Jansen, J H, Raymakers, R A P

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Degradable dU-based DNA template as a standard in real-time PCR quantitation von PENNINGS, J. L. A, VAN DE LOCHT, L. T. F, JANSEN, J. H, VAN DER REIJDEN, B. A, DE WITTE, T, MENSINK, Ejbm

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Breast Cancer Resistance Protein in Drug Resistance of Primitive CD34+38− Cells in Acute Myeloid Leukemia von RAAIJMAKERS, Marc H. G. P, DE GROUW, Elke P. L. M, HEUVER, Leonie H. H, VAN DER REIJDEN, Bert A, JANSEN, Joop H, SCHEPER, Rik J, SCHEFFER, George L, DE WITTE, Theo J. M, RAYMAKERS, Reinier A. P

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Bcl-2 prevents loss of mitochondria in CCCP-induced apoptosis von de Graaf, Aniek O., van den Heuvel, Lambert P., Dijkman, Henry B.P.M., De Abreu, Ronney A., Birkenkamp, Kim U., de Witte, Theo, van der Reijden, Bert A., Smeitink, Jan A.M., Jansen, Joop H.

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Deletion of the multidrug resistance-associated protein (MRP1) gene in acute myeloid leukemia with inversion of chromosome 16 has no prognostic impact von Döhner, K, Schlenk, R F, van der Reijden, B A, Döhner, H

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The E3 ubiquitin-protein ligase Triad1 inhibits clonogenic growth of primary myeloid progenitor cells von Marteijn, Jurgen A.F., van Emst, Liesbeth, Erpelinck-Verschueren, Claudia A.J., Nikoloski, Gorica, Menke, Aswin, de Witte, Theo, Löwenberg, Bob, Jansen, Joop H., van der Reijden, Bert A.

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ID1 and ID2 are retinoic acid responsive genes and induce a G0 G1 accumulation in acute promyelocytic leukemia cells von NIGTEN, J, BREEMS-DE RIDDER, M. C, ERPELINCK -VERSCHUEREN, C. A. J, NIKOLOSKI, G, VAN DER REIJDEN, B. A, VAN WAGENINGEN, S, VAN HENNIK, P. B, DE WITTE, T, LÖWENBERG, B, JANSEN, J. H

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Expression of C‐IAP1, C‐IAP2 and SURVIVIN discriminates different types of lymphoid malignancies von Graaf, Aniek O., Han van Krieken, J., Tönnissen, Evelyn, Wissink, Willemijn, Locht, Louis, Overes, Ingrid, Dolstra, Harry, Witte, Theo, Reijden, Bert A., Jansen, Joop H.

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ABCB1 Modulation Does Not Circumvent Drug Extrusion from Primitive Leukemic Progenitor Cells and May Preferentially Target Residual Normal Cells in Acute Myelogenous Leukemia von RAAIJMAKERS, Marc H. G. P, DE GROUW, Elke P. L. M, VAN DER REIJDEN, Bert A, DE WITTE, Theo J. M, JANSEN, Joop H, RAYMAKERS, Reinier A. P

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Transcriptional Repression of the Neurofibromatosis-1 Tumor Suppressor by the t(8;21) Fusion Protein von Yang, Genyan, Khalaf, Waleed, van de Locht, Louis, Jansen, Joop H., Gao, Meihua, Thompson, Mary Ann, van der Reijden, Bert A., Gutmann, David H., Delwel, Ruud, Clapp, D. Wade, Hiebert, Scott W.

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C EBPα, do not forget your TIP60 von So, C W E, van der Reijden, B A

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TRIADs: A new class of proteins with a novel cysteine-rich signature von VAN DER REIJDEN, BERT A., ERPELINCK-VERSCHUEREN, CLAUDIA A.J., LÖWENBERG, BOB, JANSEN, JOOP H.

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Complete Remission of t(11;17) Positive Acute Promyelocytic Leukemia Induced by All-trans Retinoic Acid and Granulocyte Colony-Stimulating Factor von Jansen, J.H., de Ridder, M.C., Geertsma, W.M.C., Erpelinck, C.A.J., van Lom, K., Smit, E.M.E., Slater, R., Reijden, B.A. vd, de Greef, G.E., Sonneveld, P., Löwenberg, B.

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Impaired breast cancer resistance protein mediated drug transport in plasma cells in multiple myeloma von Raaijmakers, Marc H.G.P., Grouw, Elke P.L.M. de, Heuver, Leonie H.H., Reijden, Bert A. van der, Jansen, Joop H., Scheffer, George, Scheper, Rik J., Witte, Theo J.M. de, Raymakers, Reinier A.P.

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