A cancer drug atlas enables synergistic targeting of independent drug vulnerabilities von Narayan, Ravi S., Molenaar, Piet, Teng, Jian, Cornelissen, Fleur M. G., Roelofs, Irene, Menezes, Renee, Dik, Rogier, Lagerweij, Tonny, Broersma, Yoran, Petersen, Naomi, Marin Soto, Jhon Alexander, Brands, Eelke, van Kuiken, Philip, Lecca, Maria C., Lenos, Kristiaan J., In ‘t Veld, Sjors G. J. G., van Wieringen, Wessel, Lang, Frederick F., Sulman, Erik, Verhaak, Roel, Baumert, Brigitta G., Stalpers, Lucas J. A., Vermeulen, Louis, Watts, Colin, Bailey, David, Slotman, Ben J., Versteeg, Rogier, Noske, David, Sminia, Peter, Tannous, Bakhos A., Wurdinger, Tom, Koster, Jan, Westerman, Bart A.

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CGHcall: calling aberrations for array CGH tumor profiles von van de Wiel, Mark A., Kim, Kyung In, Vosse, Sjoerd J., van Wieringen, Wessel N., Wilting, Saskia M., Ylstra, Bauke

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A parallel algorithm for ridge-penalized estimation of the multivariate exponential family from data of mixed types von Laman Trip, Diederik S., Wieringen, Wessel N. van

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Penalized estimation of the Gaussian graphical model from data with replicates von Wieringen, Wessel N., Chen, Yao

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Better prediction by use of co-data: adaptive group-regularized ridge regression von van de Wiel, Mark A., Lien, Tonje G., Verlaat, Wina, van Wieringen, Wessel N., Wilting, Saskia M.

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Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection von Bachas, Costa, Hodzic, Jasmina, van der Mijn, Johannes C, Stoepker, Chantal, Verheul, Henk M W, Wolthuis, Rob M F, Felley-Bosco, Emanuela, van Wieringen, Wessel N, van Beusechem, Victor W, Brakenhoff, Ruud H, de Menezes, Renée X

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A test for detecting differential indirect trans effects between two groups of samples von Chaturvedi, Nimisha, Menezes, Renée X. de, Goeman, Jelle J., Wieringen, Wessel van

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Two-dimensional fused targeted ridge regression for health indicator prediction from accelerometer data von Lettink, Annelinde, Chinapaw, Mai, van Wieringen, Wessel N

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Analysis of Twitter data with the Bayesian fused graphical lasso von Aflakparast, Mehran, de Gunst, Mathisca, van Wieringen, Wessel

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Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses von van Wieringen, Wessel N, Unger, Kristian, Leday, Gwenaël G R, Krijgsman, Oscar, de Menezes, Renée X, Ylstra, Bauke, van de Wiel, Mark A

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A test for comparing two groups of samples when analyzing multiple omics profiles von Chaturvedi, Nimisha, Goeman, Jelle J, Boer, Judith M, van Wieringen, Wessel N, de Menezes, Renée X

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Nonparametric Testing for DNA Copy Number Induced Differential mRNA Gene Expression von van Wieringen, Wessel N., van de Wiel, Mark A.

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CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss von Van De Wiel, Mark A., Van Wieringen, Wessel N.

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Magnetic resonance imaging pattern recognition in hypomyelinating disorders von Steenweg, Marjan E., Vanderver, Adeline, Blaser, Susan, Bizzi, Alberto, de Koning, Tom J., Mancini, Grazia M. S., van Wieringen, Wessel N., Barkhof, Frederik, Wolf, Nicole I., van der Knaap, Marjo S.

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Ridge estimation of inverse covariance matrices from high-dimensional data von van Wieringen, Wessel N., Peeters, Carel F.W.

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tigaR: integrative significance analysis of temporal differential gene expression induced by genomic abnormalities von Miok, Viktorian, Wilting, Saskia M, van de Wiel, Mark A, Jaspers, Annelieke, van Noort, Paula I, Brakenhoff, Ruud H, Snijders, Peter J F, Steenbergen, Renske D M, van Wieringen, Wessel N

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Mechanical stress regulates bone regulatory gene expression independent of estrogen and vitamin D deficiency in rats von Nepal, Ashwini Kumar, Essen, Huib W., Veen, Albert J., Wieringen, Wessel N., Stavenuiter, Andrea W. D., Cayami, Ferdy Kurniawan, Pals, Gerard, Micha, Dimitra, Vanderschueren, Dirk, Lips, Paul, Bravenboer, Nathalie

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Genomic profiling identifies common HPV-associated chromosomal alterations in squamous cell carcinomas of cervix and head and neck von Wilting, Saskia M, Smeets, Serge J, Snijders, Peter J F, van Wieringen, Wessel N, van de Wiel, Mark A, Meijer, Gerrit A, Ylstra, Bauke, Leemans, C René, Meijer, Chris J L M, Brakenhoff, Ruud H, Braakhuis, Boudewijn J M, Steenbergen, Renske D M

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No Plasmatic Proteomic Signature at Clinical Disease Onset Associated With 11 Year Clinical, Cognitive and MRI Outcomes in Relapsing-Remitting Multiple Sclerosis Patients von Bridel, Claire, Eijlers, Anand J C, van Wieringen, Wessel N, Koel-Simmelink, Marleen, Leurs, Cyra E, Schoonheim, Menno M, Killestein, Joep, Teunissen, Charlotte E

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HPV type-related chromosomal profiles in high-grade cervical intraepithelial neoplasia von Bierkens, Mariska, Wilting, Saskia M, van Wieringen, Wessel N, van de Wiel, Mark A, Ylstra, Bauke, Meijer, Chris J L M, Snijders, Peter J F, Steenbergen, Renske D M

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