An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar von Grubaugh, Nathan D, Gangavarapu, Karthik, Quick, Joshua, Matteson, Nathaniel L, De Jesus, Jaqueline Goes, Main, Bradley J, Tan, Amanda L, Paul, Lauren M, Brackney, Doug E, Grewal, Saran, Gurfield, Nikos, Van Rompay, Koen K A, Isern, Sharon, Michael, Scott F, Coffey, Lark L, Loman, Nicholas J, Andersen, Kristian G

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Zika Virus Tissue and Blood Compartmentalization in Acute Infection of Rhesus Macaques von Coffey, Lark L, Pesavento, Patricia A, Keesler, Rebekah I, Singapuri, Anil, Watanabe, Jennifer, Watanabe, Rie, Yee, JoAnn, Bliss-Moreau, Eliza, Cruzen, Christina, Christe, Kari L, Reader, J Rachel, von Morgenland, Wilhelm, Gibbons, Anne M, Allen, A Mark, Linnen, Jeff, Gao, Kui, Delwart, Eric, Simmons, Graham, Stone, Mars, Lanteri, Marion, Bakkour, Sonia, Busch, Michael, Morrison, John, Van Rompay, Koen K A

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Harnessing early life immunity to develop a pediatric HIV vaccine that can protect through adolescence von Goswami, Ria, Berendam, Stella J., Li, Shuk Hang, Nelson, Ashley N., De Paris, Kristina, Van Rompay, Koen K. A., Permar, Sallie R., Fouda, Genevieve G.

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Zika virus persistence in the male macaque reproductive tract von Ball, Erin E, Pesavento, Patricia A, Van Rompay, Koen K. A, Keel, M. Kevin, Singapuri, Anil, Gomez-Vazquez, Jose P, Dudley, Dawn M, O'Connor, David H, Breitbach, Meghan E, Maness, Nicholas J, Schouest, Blake, Panganiban, Antonito, Coffey, Lark L

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Multiscale analysis for patterns of Zika virus genotype emergence, spread, and consequence von Borucki, Monica K, Collette, Nicole M, Coffey, Lark L, Van Rompay, Koen K A, Hwang, Mona H, Thissen, James B, Allen, Jonathan E, Zemla, Adam T

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Neuroanatomical abnormalities in a nonhuman primate model of congenital Zika virus infection von Beckman, Danielle, Seelke, Adele M H, Bennett, Jeffrey, Dougherty, Paige, Van Rompay, Koen K A, Keesler, Rebekah, Pesavento, Patricia A, Coffey, Lark L A, Morrison, John H, Bliss-Moreau, Eliza

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A virus-like particle-based bivalent PCSK9 vaccine lowers LDL-cholesterol levels in non-human primates von Fowler, Alexandra, Van Rompay, Koen K. A., Sampson, Maureen, Leo, Javier, Watanabe, Jennifer K., Usachenko, Jodie L., Immareddy, Ramya, Lovato, Debbie M., Schiller, John T., Remaley, Alan T., Chackerian, Bryce

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Reduction of pyramidal and immature hippocampal neurons in pediatric simian immunodeficiency virus infection von Curtis, Kimberly, Rollins, Matthew, Carryl, Heather, Van Rompay, Koen K.A, Abel, Kristina, Burke, Mark W

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SARS-CoV-2 induces robust germinal center CD4 T follicular helper cell responses in rhesus macaques von Shaan Lakshmanappa, Yashavanth, Elizaldi, Sonny R., Roh, Jamin W., Schmidt, Brian A., Carroll, Timothy D., Weaver, Kourtney D., Smith, Justin C., Verma, Anil, Deere, Jesse D., Dutra, Joseph, Stone, Mars, Franz, Sergej, Sammak, Rebecca Lee, Olstad, Katherine J., Rachel Reader, J., Ma, Zhong-Min, Nguyen, Nancy K., Watanabe, Jennifer, Usachenko, Jodie, Immareddy, Ramya, Yee, JoAnn L., Weiskopf, Daniela, Sette, Alessandro, Hartigan-O’Connor, Dennis, McSorley, Stephen J., Morrison, John H., Tran, Nam K., Simmons, Graham, Busch, Michael P., Kozlowski, Pamela A., Van Rompay, Koen K. A., Miller, Christopher J., Iyer, Smita S.

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Pharmacokinetics and Safety of Single-Dose Tenofovir Disoproxil Fumarate and Emtricitabine in HIV-1-Infected Pregnant Women and Their Infants von FLYNN, Patricia M, MIROCHNICK, Mark, KEARNEY, Brian, MOFENSON, Lynne M, HEATHER WATTS, D, JEAN-PHILIPPE, Patrick, HECKMAN, Barbara, THORPE, Edwin, COTTER, Amanda, PURSWANI, Murli, SHAPIRO, David E, BARDEGUEZ, Arlene, RODMAN, John, ROBBINS, Brian, HUANG, Sharon, FISCUS, Susan A, VAN ROMPAY, Koen K. A, ROONEY, James F

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A bacteriophage virus-like particle vaccine against oxycodone elicits high-titer and long-lasting antibodies that sequester drug in the blood von Romano, Isabella G., Core, Susan B., Lee, Naomi R., Mowry, Curtis, Van Rompay, Koen K.A., Huang, Yumei, Chackerian, Bryce, Frietze, Kathryn M.

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Vaccine-Induced, High-Magnitude HIV Env-Specific Antibodies with Fc-Mediated Effector Functions Are Insufficient to Protect Infant Rhesus Macaques against Oral SHIV Infection von Curtis, 2nd, Alan D, Saha, Pooja T, Dennis, Maria, Berendam, Stella J, Ramasubramanian, Pratamesh, Cross, Kaitlyn A, Alam, S Munir, Ferrari, Guido, Kozlowski, Pamela A, Fouda, Genevieve G, Hudgens, Michael G, Van Rompay, Koen K A, Pollara, Justin, Permar, Sallie R, De Paris, Kristina

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Intraamniotic Zika virus inoculation of pregnant rhesus macaques produces fetal neurologic disease von Coffey, Lark L., Keesler, Rebekah I., Pesavento, Patricia A., Woolard, Kevin, Singapuri, Anil, Watanabe, Jennifer, Cruzen, Christina, Christe, Kari L., Usachenko, Jodie, Yee, JoAnn, Heng, Victoria A., Bliss-Moreau, Eliza, Reader, J. Rachel, von Morgenland, Wilhelm, Gibbons, Anne M., Jackson, Kenneth, Ardeshir, Amir, Heimsath, Holly, Permar, Sallie, Senthamaraikannan, Paranthaman, Presicce, Pietro, Kallapur, Suhas G., Linnen, Jeffrey M., Gao, Kui, Orr, Robert, MacGill, Tracy, McClure, Michelle, McFarland, Richard, Morrison, John H., Van Rompay, Koen K. A.

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Conjugation of HIV-1 envelope to hepatitis B surface antigen alters vaccine responses in rhesus macaques von Nettere, Danielle, Unnithan, Shakthi, Rodgers, Nicole, Nohara, Junsuke, Cray, Paul, Berry, Madison, Jones, Caroline, Armand, Lawrence, Li, Shuk Hang, Berendam, Stella J., Fouda, Genevieve G., Cain, Derek W., Spence, Taylor N., Granek, Joshua A., Davenport, Clemontina A., Edwards, Robert J., Wiehe, Kevin, Van Rompay, Koen K. A., Moody, M. Anthony, Permar, Sallie R., Pollara, Justin

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Genomic insights into the host specific adaptation of the Pneumocystis genus von Cissé, Ousmane H., Ma, Liang, Dekker, John P., Khil, Pavel P., Youn, Jung-Ho, Brenchley, Jason M., Blair, Robert, Pahar, Bapi, Chabé, Magali, Van Rompay, Koen K. A., Keesler, Rebekah, Sukura, Antti, Hirsch, Vanessa, Kutty, Geetha, Liu, Yueqin, Peng, Li, Chen, Jie, Song, Jun, Weissenbacher-Lang, Christiane, Xu, Jie, Upham, Nathan S., Stajich, Jason E., Cuomo, Christina A., Cushion, Melanie T., Kovacs, Joseph A.

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DNA vaccination in rhesus macaques induces potent immune responses and decreases acute and chronic viremia after SIVmac251 challenge von Rosati, Margherita, Bergamaschi, Cristina, Valentin, Antonio, Kulkarni, Viraj, Jalah, Rashmi, Alicea, Candido, Patel, Vainav, von Gegerfelt, Agneta S, Montefiori, David C, Venzon, David J, Khan, Amir S, Draghia-Akli, Ruxandra, Van Rompay, Koen K.A, Felber, Barbara K, Pavlakis, George N

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A Vaccine against CCR5 Protects a Subset of Macaques upon Intravaginal Challenge with Simian Immunodeficiency Virus SIVmac251 von Van Rompay, Koen K A, Hunter, Zoe, Jayashankar, Kartika, Peabody, Julianne, Montefiori, David, LaBranche, Celia C, Keele, Brandon F, Jensen, Kara, Abel, Kristina, Chackerian, Bryce

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Sutterella and its metabolic pathways positively correlate with vaccine-elicited antibody responses in infant rhesus macaques von Jiang, Danting, Goswami, Ria, Dennis, Maria, Heimsath, Holly, Kozlowski, Pamela A, Ardeshir, Amir, Van Rompay, Koen K A, De Paris, Kristina, Permar, Sallie R, Surana, Neeraj K

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Leveraging antigenic seniority for maternal vaccination to prevent mother-to-child transmission of HIV-1 von Nelson, Ashley N., Dennis, Maria, Mangold, Jesse F., Li, Katherine, Saha, Pooja T., Cronin, Kenneth, Cross, Kaitlyn A., Kumar, Amit, Mangan, Riley J., Shaw, George M., Bar, Katharine J., Haynes, Barton, Moody, Anthony M., Munir Alam, S., Pollara, Justin, Hudgens, Michael G., Van Rompay, Koen K. A., De Paris, Kristina, Permar, Sallie R.

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Maternal-Fetal Pharmacokinetics and Dynamics of a Single Intrapartum Dose of Maraviroc in Rhesus Macaques von WINTERS, Mark A, VAN ROMPAY, Koen K. A, KASHUBA, Angela D. M, SHULMAN, Nancy S, HOLODNIY, Mark

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