Compositional Structure of the Genome: A Review von Bernaola-Galván, Pedro, Carpena, Pedro, Gómez-Martín, Cristina, Oliver, Jose L

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Assessing the complementary information from an increased number of biologically relevant features in liquid biopsy-derived RNA-Seq data von Giannoukakos, Stavros, D'Ambrosi, Silvia, Koppers-Lalic, Danijela, Gómez-Martín, Cristina, Fernandez, Alberto, Hackenberg, Michael

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Transcriptomic analysis of the tick midgut and salivary gland responses upon repeated blood-feeding on a vertebrate host von Medina, José María, Jmel, Mohamed Amine, Cuveele, Brent, Gómez-Martín, Cristina, Aparicio-Puerta, Ernesto, Mekki, Imen, Kotál, Jan, Martins, Larissa Almeida, Hackenberg, Michael, Bensaoud, Chaima, Kotsyfakis, Michail

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Genome-Wide Analysis of microRNA Expression Profile in Roots and Leaves of Three Wheat Cultivars under Water and Drought Conditions von Gómez-Martín, Cristina, Zhou, Hui, Medina, José María, Aparicio-Puerta, Ernesto, Shi, Bujun, Hackenberg, Michael

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NGSmethDB 2017: enhanced methylomes and differential methylation von Lebrón, Ricardo, Gómez-Martín, Cristina, Carpena, Pedro, Bernaola-Galván, Pedro, Barturen, Guillermo, Hackenberg, Michael, Oliver, José L

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The Virus-Induced Upregulation of the miR-183/96/182 Cluster and the FoxO Family Protein Members Are Not Required for Efficient Replication of HSV-1 von Zubković, Andreja, Žarak, Ines, Ratkaj, Ivana, Rokić, Filip, Jekić, Maja, Pribanić Matešić, Marina, Lebrón, Ricardo, Gómez-Martín, Cristina, Lisnić, Berislav, Lisnić, Vanda Juranić, Jonjić, Stipan, Pan, Dongli, Vugrek, Oliver, Hackenberg, Michael, Jurak, Igor

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sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression von Aparicio-Puerta, Ernesto, Lebrón, Ricardo, Rueda, Antonio, Gómez-Martín, Cristina, Giannoukakos, Stavros, Jaspez, David, Medina, José María, Zubkovic, Andreja, Jurak, Igor, Fromm, Bastian, Marchal, Juan Antonio, Oliver, José, Hackenberg, Michael

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sRNAtoolbox: an integrated collection of small RNA research tools von Rueda, Antonio, Barturen, Guillermo, Lebrón, Ricardo, Gómez-Martín, Cristina, Alganza, Ángel, Oliver, José L, Hackenberg, Michael

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Transcriptional Dynamics and Candidate Genes Involved in Pod Maturation of Common Bean ( Phaseolus vulgaris L.) von Gómez-Martín, Cristina, Capel, Carmen, González, Ana M, Lebrón, Ricardo, Yuste-Lisbona, Fernando J, Hackenberg, Michael, Oliver, José L, Santalla, Marta, Lozano, Rafael

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sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms von Aparicio-Puerta, Ernesto, Gómez-Martín, Cristina, Giannoukakos, Stavros, Medina, José María, Scheepbouwer, Chantal, García-Moreno, Adrián, Carmona-Saez, Pedro, Fromm, Bastian, Pegtel, Michiel, Keller, Andreas, Marchal, Juan Antonio, Hackenberg, Michael

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mirnaQC: a webserver for comparative quality control of miRNA-seq data von Aparicio-Puerta, Ernesto, Gómez-Martín, Cristina, Giannoukakos, Stavros, Medina, José María, Marchal, Juan Antonio, Hackenberg, Michael

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NORMSEQ: a tool for evaluation, selection and visualization of RNA-Seq normalization methods von Scheepbouwer, Chantal, Hackenberg, Michael, van Eijndhoven, Monique A J, Gerber, Alan, Pegtel, Michiel, Gómez-Martín, Cristina

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Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits von Gómez-Martín, Cristina, Zhou, Hui, Medina, José Maria, Aparicio-Puerta, Ernesto, Hackenberg, Michael, Shi, Bujun

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Decoding Gene Expression Signatures Underlying Vegetative to Inflorescence Meristem Transition in the Common Bean von González, Ana M, Lebrón, Ricardo, Yuste-Lisbona, Fernando J, Gómez-Martín, Cristina, Ortiz-Atienza, Ana, Hackenberg, Michael, Oliver, José L, Lozano, Rafael, Santalla, Marta

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Myxoinflammatory fibroblastic sarcoma of the face von Gómez Martín, Cristina, Ortega, María I, Aramburu, José A, Fernández-Cañamaque, José L

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Prediction of CpG Islands as an Intrinsic Clustering Property Found in Many Eukaryotic DNA Sequences and Its Relation to DNA Methylation von Gómez-Martín, Cristina, Lebrón, Ricardo, Oliver, José L., Hackenberg, Michael

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Driven progressive evolution of genome sequence complexity in Cyanobacteria von Moya, Andrés, Oliver, José L., Verdú, Miguel, Delaye, Luis, Arnau, Vicente, Bernaola-Galván, Pedro, de la Fuente, Rebeca, Díaz, Wladimiro, Gómez-Martín, Cristina, González, Francisco M., Latorre, Amparo, Lebrón, Ricardo, Román-Roldán, Ramón

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Reassessment of miRNA variant (isomiRs) composition by small RNA sequencing von Gómez-Martín, Cristina, Aparicio-Puerta, Ernesto, van Eijndhoven, Monique A.J., Medina, José M., Hackenberg, Michael, Pegtel, D. Michiel

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sRNAtoolboxVM: Small RNA Analysis in a Virtual Machine von Gómez-Martín, Cristina, Lebrón, Ricardo, Rueda, Antonio, Oliver, José L., Hackenberg, Michael

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Functional characterization of the tomato HAIRPLUS gene reveals the implication of the epigenome in the control of glandular trichome formation von Fonseca, Rocío, Capel, Carmen, Yuste-Lisbona, Fernando J, Quispe, Jorge L, Gómez-Martín, Cristina, Lebrón, Ricardo, Hackenberg, Michael, Oliver, José L, Angosto, Trinidad, Lozano, Rafael, Capel, Juan

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