The cholesterol biosynthesis pathway regulates IL-10 expression in human Th1 cells von Perucha, Esperanza, Melchiotti, Rossella, Bibby, Jack A, Wu, Wing, Frederiksen, Klaus Stensgaard, Roberts, Ceri A., Hall, Zoe, LeFriec, Gaelle, Robertson, Kevin A., Lavender, Paul, Gerwien, Jens Gammeltoft, Taams, Leonie S., Griffin, Julian L., de Rinaldis, Emanuele, van Baarsen, Lisa G. M., Kemper, Claudia, Ghazal, Peter, Cope, Andrew P.

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Retinoic Acid Is Essential for Th1 Cell Lineage Stability and Prevents Transition to a Th17 Cell Program von Brown, Chrysothemis C., Esterhazy, Daria, Sarde, Aurelien, London, Mariya, Pullabhatla, Venu, Osma-Garcia, Ines, al-Bader, Raya, Ortiz, Carla, Elgueta, Raul, Arno, Matthew, de Rinaldis, Emanuele, Mucida, Daniel, Lord, Graham M., Noelle, Randolph J.

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Comparative expression pathway analysis of human and canine mammary tumors von Uva, Paolo, Aurisicchio, Luigi, Watters, James, Loboda, Andrey, Kulkarni, Amit, Castle, John, Palombo, Fabio, Viti, Valentina, Mesiti, Giuseppe, Zappulli, Valentina, Marconato, Laura, Abramo, Francesca, Ciliberto, Gennaro, Lahm, Armin, La Monica, Nicola, de Rinaldis, Emanuele

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Interplay between the human gut microbiome and host metabolism von Visconti, Alessia, Le Roy, Caroline I., Rosa, Fabio, Rossi, Niccolò, Martin, Tiphaine C., Mohney, Robert P., Li, Weizhong, de Rinaldis, Emanuele, Bell, Jordana T., Venter, J. Craig, Nelson, Karen E., Spector, Tim D., Falchi, Mario

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Pathway-based analysis of genome-wide siRNA screens reveals the regulatory landscape of APP processing von Camargo, Luiz Miguel, Zhang, Xiaohua Douglas, Loerch, Patrick, Caceres, Ramon Miguel, Marine, Shane D, Uva, Paolo, Ferrer, Marc, de Rinaldis, Emanuele, Stone, David J, Majercak, John, Ray, William J, Yi-An, Chen, Shearman, Mark S, Mizuguchi, Kenji

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An optimized workflow for single-cell transcriptomics and repertoire profiling of purified lymphocytes from clinical samples von Hanamsagar, Richa, Reizis, Timothy, Chamberlain, Mathew, Marcus, Robert, Nestle, Frank O., de Rinaldis, Emanuele, Savova, Virginia

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Genome-wide expression profile of sporadic gastric cancers with microsatellite instability von D’Errico, Mariarosaria, Rinaldis, Emanuele de, Blasi, Monica F, Viti, Valentina, Falchetti, Mario, Calcagnile, Angelo, Sera, Francesco, Saieva, Calogero, Ottini, Laura, Palli, Domenico, Palombo, Fabio, Giuliani, Alessandro, Dogliotti, Eugenia

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Enhanced NF-κB signaling in type-2 dendritic cells at baseline predicts non-response to adalimumab in psoriasis von Andres-Ejarque, Rosa, Ale, Hira Bahadur, Grys, Katarzyna, Tosi, Isabella, Solanky, Shane, Ainali, Chrysanthi, Catak, Zeynep, Sreeneebus, Hemawtee, Saklatvala, Jake, Dand, Nick, de Rinaldis, Emanuele, Chapman, Anna, Nestle, Frank O., Barnes, Michael R., Warren, Richard B., Reynolds, Nick J., Griffiths, Christopher E. M., Barker, Jonathan N., Smith, Catherine H., Di Meglio, Paola

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IL-33 Expression Is Lower in Current Smokers at both Transcriptomic and Protein Levels von Faiz, Alen, Mahbub, Rashad M, Boedijono, Fia Sabrina, Tomassen, Milan I, Kooistra, Wierd, Timens, Wim, Nawijn, Martijn, Hansbro, Philip M, Johansen, Matt D, Pouwels, Simon D, Heijink, Irene H, Massip, Florian, de Biase, Maria Stella, Schwarz, Roland F, Adcock, Ian M, Chung, Kian F, van der Does, Anne, Hiemstra, Pieter S, Goulaouic, Helene, Xing, Heming, Abdulai, Raolat, de Rinaldis, Emanuele, Cunoosamy, Danen, Harel, Sivan, Lederer, David, Nivens, Michael C, Wark, Peter A, Kerstjens, Huib A M, Hylkema, Machteld N, Brandsma, Corry-Anke, van den Berge, Maarten

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Integrated genomics and functional validation identifies malignant cell specific dependencies in triple negative breast cancer von Patel, Nirmesh, Weekes, Daniel, Drosopoulos, Konstantinos, Gazinska, Patrycja, Noel, Elodie, Rashid, Mamun, Mirza, Hasan, Quist, Jelmar, Brasó-Maristany, Fara, Mathew, Sumi, Ferro, Riccardo, Pereira, Ana Mendes, Prince, Cynthia, Noor, Farzana, Francesch-Domenech, Erika, Marlow, Rebecca, de Rinaldis, Emanuele, Grigoriadis, Anita, Linardopoulos, Spiros, Marra, Pierfrancesco, Tutt, Andrew N. J.

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Publisher Correction: An optimized workflow for single-cell transcriptomics and repertoire profiling of purified lymphocytes from clinical samples von Hanamsagar, Richa, Reizis, Timothy, Chamberlain, Mathew, Marcus, Robert, Nestle, Frank O., de Rinaldis, Emanuele, Savova, Virginia

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Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer von Jacobsen, Annika, Bosch, Linda J. W., Martens-de Kemp, Sanne R., Carvalho, Beatriz, Sillars-Hardebol, Anke H., Dobson, Richard J., de Rinaldis, Emanuele, Meijer, Gerrit A., Abeln, Sanne, Heringa, Jaap, Fijneman, Remond J. A., Feenstra, K. Anton

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A marker gene-based method for identifying the cell-type of origin from single-cell RNA sequencing data von Nouri, Nima, Gaglia, Giorgio, Kurlovs, Andre H., de Rinaldis, Emanuele, Savova, Virginia

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IL15RA Drives Antagonistic Mechanisms of Cancer Development and Immune Control in Lymphocyte-Enriched Triple-Negative Breast Cancers von MARRA, Pierfrancesco, MATHEW, Sumi, HAYDAY, Adrian, TUTT, Andrew, GRIGORIADIS, Anita, YIN WU, KYLE-CEZAR, Fernanda, WATKINS, Johnathan, RASHID, Mamunur, DE RINALDIS, Emanuele, HESSEY, Sonya, GAZINSKA, Patrycja

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The integration of large-scale public data and network analysis uncovers molecular characteristics of psoriasis von Federico, Antonio, Pavel, Alisa, Möbus, Lena, McKean, David, Del Giudice, Giusy, Fortino, Vittorio, Niehues, Hanna, Rastrick, Joe, Eyerich, Kilian, Eyerich, Stefanie, van den Bogaard, Ellen, Smith, Catherine, Weidinger, Stephan, de Rinaldis, Emanuele, Greco, Dario

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Author Correction: Enhanced NF-κB signaling in type-2 dendritic cells at baseline predicts non-response to adalimumab in psoriasis von Andres-Ejarque, Rosa, Ale, Hira Bahadur, Grys, Katarzyna, Tosi, Isabella, Solanky, Shane, Ainali, Chrysanthi, Catak, Zeynep, Sreeneebus, Hemawtee, Saklatvala, Jake, Dand, Nick, de Rinaldis, Emanuele, Chapman, Anna, Nestle, Frank O., Barnes, Michael R., Warren, Richard B., Reynolds, Nick J., Griffiths, Christopher E. M., Barker, Jonathan N., Smith, Catherine H., Di Meglio, Paola

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DiSiR: fast and robust method to identify ligand–receptor interactions at subunit level from single-cell RNA-sequencing data von Vahid, Milad R, Kurlovs, Andre H, Andreani, Tommaso, Augé, Franck, Olfati-Saber, Reza, de Rinaldis, Emanuele, Rapaport, Franck, Savova, Virginia

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MMP11: A Novel Target Antigen for Cancer Immunotherapy von Peruzzi, Daniela, Mori, Federica, Conforti, Antonella, Lazzaro, Domenico, De Rinaldis, Emanuele, Ciliberto, Gennaro, La Monica, Nicola, Aurisicchio, Luigi

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Genetic analyses of inflammatory polyneuropathy and chronic inflammatory demyelinating polyradiculoneuropathy identified candidate genes von Du, Zhaohui, Lessard, Samuel, Iyyanki, Tejaswi, Chao, Michael, Hammond, Timothy, Ofengeim, Dimitry, Klinger, Katherine, de Rinaldis, Emanuele, Shameer, Khader, Chatelain, Clément

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Bayesian clinical classification from high-dimensional data: Signatures versus variability von Shalabi, Akram, Inoue, Masato, Watkins, Johnathan, De Rinaldis, Emanuele, Coolen, Anthony CC

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