The genome architecture of the Collaborative Cross mouse genetic reference population von Cross Consortium, Collaborative

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Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance von Crowley, James J, Zhabotynsky, Vasyl, Sun, Wei, Huang, Shunping, Pakatci, Isa Kemal, Kim, Yunjung, Wang, Jeremy R, Morgan, Andrew P, Calaway, John D, Aylor, David L, Yun, Zaining, Bell, Timothy A, Buus, Ryan J, Calaway, Mark E, Didion, John P, Gooch, Terry J, Hansen, Stephanie D, Robinson, Nashiya N, Shaw, Ginger D, Spence, Jason S, Quackenbush, Corey R, Barrick, Cordelia J, Nonneman, Randal J, Kim, Kyungsu, Xenakis, James, Xie, Yuying, Valdar, William, Lenarcic, Alan B, Wang, Wei, Welsh, Catherine E, Fu, Chen-Ping, Zhang, Zhaojun, Holt, James, Guo, Zhishan, Threadgill, David W, Tarantino, Lisa M, Miller, Darla R, Zou, Fei, McMillan, Leonard, Sullivan, Patrick F, Pardo-Manuel de Villena, Fernando

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A Novel Statistical Approach for Jointly Analyzing RNA-Seq Data from F 1 Reciprocal Crosses and Inbred Lines von Zou, F, Sun, W, Crowley, JJ, Zhabotynsky, V, Sullivan, PF, de, Villena FP-M

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A novel statistical approach for jointly analyzing RNA-Seq data from F1 reciprocal crosses and inbred lines von Zou, Fei, Sun, Wei, Crowley, James J, Zhabotynsky, Vasyl, Sullivan, Patrick F, Pardo-Manuel de Villena, Fernando

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Antipsychotic Behavioral Phenotypes in the Mouse Collaborative Cross Recombinant Inbred Inter-Crosses (RIX) von Giusti-Rodriguez, Paola, Xenakis, James G., Crowley, James J., Nonneman, Randal J., DeCristo, Daniela M., Ryan, Allison, Quackenbush, Corey R., Miller, Darla R., Shaw, Ginger D., Zhabotynsky, Vasyl, Sullivan, Patrick F., Manuel de Villena, Fernando Pardo, Zou, Fei

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IsoDOT Detects Differential RNA-Isoform Expression/Usage With Respect to a Categorical or Continuous Covariate With High Sensitivity and Specificity von Sun, Wei, Liu, Yufeng, Crowley, James J, Chen, Ting-Huei, Zhou, Hua, Chu, Haitao, Huang, Shunping, Kuan, Pei-Fen, Li, Yuan, Miller, Darla, Shaw, Ginger, Wu, Yichao, Zhabotynsky, Vasyl, McMillan, Leonard, Zou, Fei, Sullivan, Patrick F, De Villena, Fernando Pardo-Manuel

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Analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance (vol 47, pg 353, 2015) von Crowley, JJ, Zhabotynsky, V, Sun, W, Huang, S, Pakatci, IK, Kim, Y, Wang, JR, Morgan, AP, Calaway, JD, Aylor, DL

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Corrigendum: analyses of allele-specific gene expression in highly divergent mouse crosses identifies pervasive allelic imbalance von Crowley, James J, Zhabotynsky, Vasyl, Sun, Wei, Huang, Shunping, Pakatci, Isa Kemal, Kim, Yunjung, Wang, Jeremy R, Morgan, Andrew P, Calaway, John D, Aylor, David L, Yun, Zaining, Bell, Timothy A, Buus, Ryan J, Calaway, Mark E, Didion, John P, Gooch, Terry J, Hansen, Stephanie D, Robinson, Nashiya N, Shaw, Ginger D, Spence, Jason S, Quackenbush, Corey R, Barrick, Cordelia J, Nonneman, Randal J, Kim, Kyungsu, Xenakis, James, Xie, Yuying, Valdar, William, Lenarcic, Alan B, Wang, Wei, Welsh, Catherine E, Fu, Chen-Ping, Zhang, Zhaojun, Holt, James, Guo, Zhishan, Threadgill, David W, Tarantino, Lisa M, Miller, Darla R, Zou, Fei, McMillan, Leonard, Sullivan, Patrick F, de Villena, Fernando Pardo-Manuel

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