A comprehensive overview and evaluation of circular RNA detection tools von Zeng, Xiangxiang, Lin, Wei, Guo, Maozu, Zou, Quan

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Integrative approaches for predicting microRNA function and prioritizing disease-related microRNA using biological interaction networks von Zeng, Xiangxiang, Zhang, Xuan, Zou, Quan

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Inferring MicroRNA-Disease Associations by Random Walk on a Heterogeneous Network with Multiple Data Sources von Liu, Yuansheng, Zeng, Xiangxiang, He, Zengyou, Zou, Quan

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ADMETlab 2.0: an integrated online platform for accurate and comprehensive predictions of ADMET properties von Xiong, Guoli, Wu, Zhenxing, Yi, Jiacai, Fu, Li, Yang, Zhijiang, Hsieh, Changyu, Yin, Mingzhu, Zeng, Xiangxiang, Wu, Chengkun, Lu, Aiping, Chen, Xiang, Hou, Tingjun, Cao, Dongsheng

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Prediction and Validation of Disease Genes Using HeteSim Scores von Zeng, Xiangxiang, Liao, Yuanlu, Liu, Yuansheng, Zou, Quan

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MOEA/HD: A Multiobjective Evolutionary Algorithm Based on Hierarchical Decomposition von Xu, Hang, Zeng, Wenhua, Zhang, Defu, Zeng, Xiangxiang

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Mobility Based Trust Evaluation for Heterogeneous Electric Vehicles Network in Smart Cities von Wang, Tian, Luo, Hao, Zeng, Xiangxiang, Yu, Zhiyong, Liu, Anfeng, Sangaiah, Arun Kumar

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Similarity computation strategies in the microRNA-disease network: a survey von Zou, Quan, Li, Jinjin, Song, Li, Zeng, Xiangxiang, Wang, Guohua

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Target identification among known drugs by deep learning from heterogeneous networks von Zeng, Xiangxiang, Zhu, Siyi, Lu, Weiqiang, Liu, Zehui, Huang, Jin, Zhou, Yadi, Fang, Jiansong, Huang, Yin, Guo, Huimin, Li, Lang, Trapp, Bruce D, Nussinov, Ruth, Eng, Charis, Loscalzo, Joseph, Cheng, Feixiong

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Spiking Neural P Systems With Colored Spikes von Song, Tao, Rodriguez-Paton, Alfonso, Zheng, Pan, Zeng, Xiangxiang

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Retrosynthesis prediction with an interpretable deep-learning framework based on molecular assembly tasks von Wang, Yu, Pang, Chao, Wang, Yuzhe, Jin, Junru, Zhang, Jingjie, Zeng, Xiangxiang, Su, Ran, Zou, Quan, Wei, Leyi

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Deep learning for drug repurposing: Methods, databases, and applications von Pan, Xiaoqin, Lin, Xuan, Cao, Dongsheng, Zeng, Xiangxiang, Yu, Philip S., He, Lifang, Nussinov, Ruth, Cheng, Feixiong

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Prediction of Potential Disease-Associated MicroRNAs by Using Neural Networks von Zeng, Xiangxiang, Wang, Wen, Deng, Gaoshan, Bing, Jiaxin, Zou, Quan

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scIMC: a platform for benchmarking comparison and visualization analysis of scRNA-seq data imputation methods von Dai, Chichi, Jiang, Yi, Yin, Chenglin, Su, Ran, Zeng, Xiangxiang, Zou, Quan, Nakai, Kenta, Wei, Leyi

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CarSite-II: an integrated classification algorithm for identifying carbonylated sites based on K-means similarity-based undersampling and synthetic minority oversampling techniques von Zuo, Yun, Lin, Jianyuan, Zeng, Xiangxiang, Zou, Quan, Liu, Xiangrong

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A general hypergraph learning algorithm for drug multi-task predictions in micro-to-macro biomedical networks von Jin, Shuting, Hong, Yue, Zeng, Li, Jiang, Yinghui, Lin, Yuan, Wei, Leyi, Yu, Zhuohang, Zeng, Xiangxiang, Liu, Xiangrong

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Probability-based collaborative filtering model for predicting gene-disease associations von Zeng, Xiangxiang, Ding, Ningxiang, Rodríguez-Patón, Alfonso, Zou, Quan

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Details in the evaluation of circular RNA detection tools: Reply to Chen and Chuang von Zeng, Xiangxiang, Lin, Wei, Guo, Maozu, Zou, Quan

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Interformer: an interaction-aware model for protein-ligand docking and affinity prediction von Lai, Houtim, Wang, Longyue, Qian, Ruiyuan, Huang, Junhong, Zhou, Peng, Ye, Geyan, Wu, Fandi, Wu, Fang, Zeng, Xiangxiang, Liu, Wei

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DrugReAlign: a multisource prompt framework for drug repurposing based on large language models von Wei, Jinhang, Zhuo, Linlin, Fu, Xiangzheng, Zeng, XiangXiang, Wang, Li, Zou, Quan, Cao, Dongsheng

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