HPV16 Intratypic Variants in Head and Neck Cancers: A North American Perspective von Gameiro, Steven F, Salnikov, Mikhail Y, Zeng, Peter Y F, Barrett, John W, Nichols, Anthony C, Mymryk, Joe S

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The HPV Induced Cancer Resource (THInCR): a Suite of Tools for Investigating HPV-Dependent Human Carcinogenesis von Salnikov, Mikhail, Gameiro, Steven F., Zeng, Peter Y. F., Barrett, John W., Nichols, Anthony C., Mymryk, Joe S.

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Low expression of NSD1, NSD2, and NSD3 define a subset of human papillomavirus-positive oral squamous carcinomas with unfavorable prognosis von Gameiro, Steven F, Ghasemi, Farhad, Zeng, Peter Y F, Mundi, Neil, Howlett, Christopher J, Plantinga, Paul, Barrett, John W, Nichols, Anthony C, Mymryk, Joe S

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Metabolic pathway-based subtypes associate glycan biosynthesis and treatment response in head and neck cancer von Dankó, Benedek, Hess, Julia, Unger, Kristian, Samaga, Daniel, Walz, Christoph, Walch, Axel, Sun, Na, Baumeister, Philipp, Zeng, Peter Y. F., Walter, Franziska, Marschner, Sebastian, Späth, Richard, Gires, Olivier, Herkommer, Timm, Dazeh, Ramin, Matos, Thaina, Kreutzer, Lisa, Matschke, Johann, Eul, Katharina, Klauschen, Frederick, Pflugradt, Ulrike, Canis, Martin, Ganswindt, Ute, Mymryk, Joe S., Wollenberg, Barbara, Nichols, Anthony C., Belka, Claus, Zitzelsberger, Horst, Lauber, Kirsten, Selmansberger, Martin

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Cigarette smoke exposure attenuates the induction of antigen-specific IgA in the murine upper respiratory tract von McGrath, Joshua J. C., Thayaparan, Danya, Cass, Steven P., Mapletoft, Jonathan P., Zeng, Peter Y. F., Koenig, Joshua F. E., Fantauzzi, Matthew F., Bagri, Puja, Ly, Bruce, Heo, Rachel, Schenck, L. Patrick, Shen, Pamela, Miller, Matthew S., Stämpfli, Martin R.

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Proteome and phosphoproteome signatures of recurrence for HPV+ head and neck squamous cell carcinoma von Kaneko, Tomonori, Zeng, Peter Y. F., Liu, Xuguang, Abdo, Rober, Barrett, John W., Zhang, Qi, Nichols, Anthony C., Li, Shawn Shun-Cheng

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F4/80+Ly6Chigh Macrophages Lead to Cell Plasticity and Cancer Initiation in Colitis von Shin, Alice E., Tesfagiorgis, Yodit, Larsen, Frederikke, Derouet, Mathieu, Zeng, Peter Y.F., Good, Hayley J., Zhang, Liyue, Rubinstein, Mara R., Han, Yiping W., Kerfoot, Steven M., Nichols, Anthony C., Hayakawa, Yoku, Howlett, Christopher J., Wang, Timothy C., Asfaha, Samuel

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Loss of MACROD2 drives radioresistance but not cisplatin resistance in HPV-positive head and neck cancer von Dawson, Alice, Karimi, Amir Hossein, Shaikh, Mushfiq H., Gazala, Walid, Zeng, Peter Y.F., Ryan, Sarah E.B., Pan, Harrison, Khan, Halema, Cecchini, Matthew, Mendez, Adrian, Palma, David A., Mymryk, Joe S., Barrett, John W., Nichols, Anthony C.

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A comparison of timing and patterns of treatment failure, and survival outcomes after progression between HPV+ and HPV− patients undergoing chemoradiation for oropharyngeal squamou... von Laxague, Francisco, Zeng, Peter Y. F., Zabihi, Dorsa, Fnais, Naif, Alshahrani, Mohammed, Fung, Kevin, MacNeil, Danielle, Mendez, Adrian, Yoo, John, Mymryk, Joseph S., Barrett, John W., Palma, David A., Nichols, Anthony C.

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Survival-Associated Metabolic Genes in Human Papillomavirus-Positive Head and Neck Cancers von Prusinkiewicz, Martin A, Gameiro, Steven F, Ghasemi, Farhad, Dodge, Mackenzie J, Zeng, Peter Y F, Maekebay, Hanna, Barrett, John W, Nichols, Anthony C, Mymryk, Joe S

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Sex disparities in head & neck cancer driver genes: An analysis of the TCGA dataset von Mundi, Neil, Ghasemi, Farhad, Zeng, Peter Y.F., Prokopec, Stephenie D., Patel, Krupal, Kim, Hugh Andrew Jinwook, Di Gravio, Eric, MacNeil, Danielle, Khan, Mohammed Imran, Han, Myung Woul, Shaikh, Mushfiq, Mendez, Adrian, Yoo, John, Fung, Kevin, Gameiro, Steven F., Palma, David A., Mymryk, Joe S., Barrett, John W., Boutros, Paul C., Nichols, Anthony C.

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Loss of LRP1B expression drives acquired chemo and radio-resistance in HPV-positive head and neck cancer von Shaikh, Mushfiq H., Dawson, Alice, Prokopec, Stephenie D., Barrett, John W., Y.F. Zeng, Peter, Khan, Mohammed I., Ryan, Sarah E.B., Cecchini, Matthew, Palma, David A., Mymryk, Joe S., Boutros, Paul C., Nichols, Anthony C.

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HPV‐negative head and neck cancers with adverse pathological features carry specific molecular changes that are associated with survival von Kim, Hugh Andrew Jinwook, Zeng, Peter Y. F., Cecchini, Matthew, Shaikh, Mushfiq Hassan, Laxague, Francisco, Deng, Xiaoxiao, Jarycki, Laura, Ryan, Sarah Elizabeth Belle, Dawson, Alice, Liu, Mu Han, Palma, David A., Patel, Krupal, Mundi, Neil, Barrett, John W., Mymryk, Joe S., Boutros, Paul C., Nichols, Anthony C.

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All HPV-negative head and neck cancers are not the same: Analysis of the TCGA dataset reveals that anatomical sites have distinct mutation, transcriptome, hypoxia, and tumor microe... von Kim, Hugh Andrew Jinwook, Zeng, Peter Y.F., Shaikh, Mushfiq Hassan, Mundi, Neil, Ghasemi, Farhad, Di Gravio, Eric, Khan, Halema, MacNeil, Danielle, Khan, Mohammed Imran, Patel, Krupal, Mendez, Adrian, Yoo, John, Fung, Kevin, Lang, Pencilla, Palma, David A., Mymryk, Joe S., Barrett, John W., Boutros, Paul C., Nichols, Anthony C.

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Chromosome 3p loss in the progression and prognosis of head and neck cancer von Shaikh, Mushfiq Hassan, Barrett, John W., Khan, Mohammed I., Kim, Hugh A.J., Zeng, Peter Y.F., Mymryk, Joe S., Nichols, Anthony C.

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Tumor molecular differences associated with outcome disparities of Black patients with head and neck cancer von Kim, Hugh A. J., Zeng, Peter Y. F., Sorgini, Alana, Shaikh, Mushfiq H., Khan, Halema, MacNeil, Danielle, Khan, Mohammed I., Mendez, Adrian, Yoo, John, Fung, Kevin, Lang, Pencilla, Palma, David A., Mymryk, Joe S., Barrett, John W., Patel, Krupal B., Boutros, Paul C., Nichols, Anthony C.

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Analysis of the TCGA Dataset Reveals that Subsites of Laryngeal Squamous Cell Carcinoma are Molecularly Distinct von Sorgini, Alana, Kim, Hugh Andrew Jinwook, Zeng, Peter Y F, Shaikh, Mushfiq Hassan, Mundi, Neil, Ghasemi, Farhad, Di Gravio, Eric, Khan, Halema, MacNeil, Danielle, Khan, Mohammed Imran, Mendez, Adrian, Yoo, John, Fung, Kevin, Lang, Pencilla, Palma, David A, Mymryk, Joe S, Barrett, John W, Patel, Krupal B, Boutros, Paul C, Nichols, Anthony C

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Immune-based classification of HPV-associated oropharyngeal cancer with implications for biomarker-driven treatment de-intensification von Zeng, Peter Y.F., Cecchini, Matthew J., Barrett, John W., Shammas-Toma, Matthew, De Cecco, Loris, Serafini, Mara S., Cavalieri, Stefano, Licitra, Lisa, Hoebers, Frank, Brakenhoff, Ruud H., Leemans, C. René, Scheckenbach, Kathrin, Poli, Tito, Wang, Xiaowei, Liu, Xinyi, Laxague, Francisco, Prisman, Eitan, Poh, Catherine, Bose, Pinaki, Dort, Joseph C., Shaikh, Mushfiq H., Ryan, Sarah E.B., Dawson, Alice, Khan, Mohammed I., Howlett, Christopher J., Stecho, William, Plantinga, Paul, Daniela da Silva, Sabrina, Hier, Michael, Khan, Halema, MacNeil, Danielle, Mendez, Adrian, Yoo, John, Fung, Kevin, Lang, Pencilla, Winquist, Eric, Palma, David A., Ziai, Hedyeh, Amelio, Antonio L., Li, Shawn S-C., Boutros, Paul C., Mymryk, Joe S., Nichols, Anthony C.

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3p Arm Loss and Survival in Head and Neck Cancer: An Analysis of TCGA Dataset von Kim, Hugh Andrew Jinwook, Shaikh, Mushfiq Hassan, Lee, Mark, Zeng, Peter Y. F., Sorgini, Alana, Akintola, Temitope, Deng, Xiaoxiao, Jarycki, Laura, Khan, Halema, MacNeil, Danielle, Khan, Mohammed Imran, Mendez, Adrian, Yoo, John, Fung, Kevin, Lang, Pencilla, Palma, David A., Patel, Krupal, Mymryk, Joe S., Barrett, John W., Boutros, Paul C., Morris, Luc G. T., Nichols, Anthony C.

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The genomic and evolutionary landscapes of anaplastic thyroid carcinoma von Zeng, Peter Y.F., Prokopec, Stephenie D., Lai, Stephen Y., Pinto, Nicole, Chan-Seng-Yue, Michelle A., Clifton-Bligh, Roderick, Williams, Michelle D., Howlett, Christopher J., Plantinga, Paul, Cecchini, Matthew J., Lam, Alfred K., Siddiqui, Iram, Wang, Jianxin, Sun, Ren X., Watson, John D., Korah, Reju, Carling, Tobias, Agrawal, Nishant, Cipriani, Nicole, Ball, Douglas, Nelkin, Barry, Rooper, Lisa M., Bishop, Justin A., Garnis, Cathie, Berean, Ken, Nicolson, Norman G., Weinberger, Paul, Henderson, Ying C., Lalansingh, Christopher M., Tian, Mao, Yamaguchi, Takafumi N., Livingstone, Julie, Salcedo, Adriana, Patel, Krupal, Vizeacoumar, Frederick, Datti, Alessandro, Xi, Liu, Nikiforov, Yuri E., Smallridge, Robert, Copland, John A., Marlow, Laura A., Hyrcza, Martin D., Delbridge, Leigh, Sidhu, Stan, Sywak, Mark, Robinson, Bruce, Fung, Kevin, Ghasemi, Farhad, Kwan, Keith, MacNeil, S. Danielle, Mendez, Adrian, Palma, David A., Khan, Mohammed I., Shaikh, Mushfiq, Ruicci, Kara M., Wehrli, Bret, Winquist, Eric, Yoo, John, Mymryk, Joe S., Rocco, James W., Wheeler, David, Scherer, Steve, Giordano, Thomas J., Barrett, John W., Faquin, William C., Gill, Anthony J., Clayman, Gary, Boutros, Paul C., Nichols, Anthony C.

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