SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation von Matsumoto, Hirotaka, Kiryu, Hisanori, Furusawa, Chikara, Ko, Minoru S H, Ko, Shigeru B H, Gouda, Norio, Hayashi, Tetsutaro, Nikaido, Itoshi

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RankProd 2.0: a refactored bioconductor package for detecting differentially expressed features in molecular profiling datasets von Del Carratore, Francesco, Jankevics, Andris, Eisinga, Rob, Heskes, Tom, Hong, Fangxin, Breitling, Rainer

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LEAP: constructing gene co-expression networks for single-cell RNA-sequencing data using pseudotime ordering von Specht, Alicia T, Li, Jun

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Entropy-based consensus clustering for patient stratification von Liu, Hongfu, Zhao, Rui, Fang, Hongsheng, Cheng, Feixiong, Fu, Yun, Liu, Yang-Yu

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Meta-analytic principal component analysis in integrative omics application von Kim, SungHwan, Kang, Dongwan, Huo, Zhiguang, Park, Yongseok, Tseng, George C

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QUBIC: a bioconductor package for qualitative biclustering analysis of gene co-expression data von Zhang, Yu, Xie, Juan, Yang, Jinyu, Fennell, Anne, Zhang, Chi, Ma, Qin

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Towards unified quality verification of synthetic count data with countsimQC von Soneson, Charlotte, Robinson, Mark D

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myTAI: evolutionary transcriptomics with R von Drost, Hajk-Georg, Gabel, Alexander, Liu, Jialin, Quint, Marcel, Grosse, Ivo

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Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data von Mandric, Igor, Temate-Tiagueu, Yvette, Shcheglova, Tatiana, Al Seesi, Sahar, Zelikovsky, Alex, Mandoiu, Ion I

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Radiolabelled apoptotic probe may be a vehicle for a novel multimodality radionuclide tumour therapy von Dizdarevic, S., McCready, R., Turner, J. F. C., Bagley, M. C., Blower, P., Schmid, P., Flux, G., Hall, A., Ziv, I.

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TSIS: an R package to infer alternative splicing isoform switches for time-series data von Guo, Wenbin, Calixto, Cristiane P G, Brown, John W S, Zhang, Runxuan

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ImpulseDE: detection of differentially expressed genes in time series data using impulse models von Sander, Jil, Schultze, Joachim L, Yosef, Nir

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Safety of 5914 intravitreal ziv-aflibercept injections von Singh, Sumit Randhir, Stewart, Michael W, Chattannavar, Goura, Ashraf, Mohammed, Souka, Ahmed, ElDardeery, Mazen, Wadhwa, Neeraj, Sarvaiya, Chintan, Mansour, Ahmad M, Marashi, Ameen, Ramchandani, Suresh, Braimah, Imoro Zeba, Jabbarpoor Bonyadi, Mohammad Hossein, Ramezani, Alireza, Soheilian, Masoud, de Oliveira Dias, João Rafael, de Andrade, Gabriel Costa, Maia, André, Rodrigues, Eduardo Büchele, Farah, Michel Eid, Banker, Alay, Chhablani, Jay

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Reference point insensitive molecular data analysis von Altenbuchinger, M, Rehberg, T, Zacharias, H U, Stämmler, F, Dettmer, K, Weber, D, Hiergeist, A, Gessner, A, Holler, E, Oefner, P J, Spang, R

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rMATS-DVR: rMATS discovery of differential variants in RNA von Wang, Jinkai, Pan, Yang, Shen, Shihao, Lin, Lan, Xing, Yi

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Condition-adaptive fused graphical lasso (CFGL): An adaptive procedure for inferring condition-specific gene co-expression network von Lyu, Yafei, Xue, Lingzhou, Zhang, Feipeng, Koch, Hillary, Saba, Laura, Kechris, Katerina, Li, Qunhua

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The Suez Canal: Past Lessons and Future Challenges von Lutmar, Carmela, Rubinovitz, Ziv

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Windows APT Warfare: Identify and prevent Windows APT attacks effectively von Ma, Sheng-Hao

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Powerful differential expression analysis incorporating network topology for next-generation sequencing data von Dona, Malathi S I, Prendergast, Luke A, Mathivanan, Suresh, Keerthikumar, Shivakumar, Salim, Agus

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switchde: inference of switch-like differential expression along single-cell trajectories von Campbell, Kieran R, Yau, Christopher

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