Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree von Yu, Guangchuang, Lam, Tommy Tsan-Yuk, Zhu, Huachen, Guan, Yi

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Epidemiology of avian influenza A H7N9 virus in human beings across five epidemics in mainland China, 2013–17: an epidemiological study of laboratory-confirmed case series von Wang, Xiling, PhD, Jiang, Hui, MD, Wu, Peng, PhD, Uyeki, Timothy M, MD, Feng, Luzhao, PhD, Lai, Shengjie, MD, Wang, Lili, MSc, Huo, Xiang, MD, Xu, Ke, MD, Chen, Enfu, MD, Wang, Xiaoxiao, MD, He, Jianfeng, MD, Kang, Min, MD, Zhang, Renli, MD, Zhang, Jin, MD, Wu, Jiabing, MD, Hu, Shixiong, MD, Zhang, Hengjiao, MD, Liu, Xiaoqing, MD, Fu, Weijie, MD, Ou, Jianming, MD, Wu, Shenggen, MD, Qin, Ying, PhD, Zhang, Zhijie, PhD, Shi, Yujing, MD, Zhang, Juanjuan, MSc, Artois, Jean, PhD, Fang, Vicky J, MPhil, Zhu, Huachen, PhD, Guan, Yi, Prof, Gilbert, Marius, PhD, Horby, Peter W, Prof, Leung, Gabriel M, Prof, Gao, George F, Prof, Cowling, Benjamin J, Prof, Yu, Hongjie, Prof

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Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia von Sabir, Jamal S. M., Lam, Tommy T.-Y., Ahmed, Mohamed M. M., Li, Lifeng, Shen, Yongyi, Abo-Aba, Salah E. M., Qureshi, Muhammad I., Abu-Zeid, Mohamed, Zhang, Yu, Khiyami, Mohammad A., Alharbi, Njud S., Hajrah, Nahid H., Sabir, Meshaal J., Mutwakil, Mohammed H. Z., Kabli, Saleh A., Alsulaimany, Faten A. S., Obaid, Abdullah Y., Zhou, Boping, Smith, David K., Holmes, Edward C., Zhu, Huachen, Guan, Yi

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Dexamethasone ameliorates severe pneumonia but slightly enhances viral replication in the lungs of SARS-CoV-2-infected Syrian hamsters von Yuan, Lunzhi, Zhou, Ming, Ma, Jian, Liu, Xuan, Chen, Peiwen, Zhu, Huachen, Tang, Qiyi, Cheng, Tong, Guan, Yi, Xia, Ningshao

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The genesis and source of the H7N9 influenza viruses causing human infections in China von Lam, Tommy Tsan-Yuk, Wang, Jia, Shen, Yongyi, Zhou, Boping, Duan, Lian, Cheung, Chung-Lam, Ma, Chi, Lycett, Samantha J., Leung, Connie Yin-Hung, Chen, Xinchun, Li, Lifeng, Hong, Wenshan, Chai, Yujuan, Zhou, Linlin, Liang, Huyi, Ou, Zhihua, Liu, Yongmei, Farooqui, Amber, Kelvin, David J., Poon, Leo L. M., Smith, David K., Pybus, Oliver G., Leung, Gabriel M., Shu, Yuelong, Webster, Robert G., Webby, Richard J., Peiris, Joseph S. M., Rambaut, Andrew, Zhu, Huachen, Guan, Yi

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Gender associates with both susceptibility to infection and pathogenesis of SARS-CoV-2 in Syrian hamster von Yuan, Lunzhi, Zhu, Huachen, Zhou, Ming, Ma, Jian, Chen, Rirong, Chen, Yao, Chen, Liqiang, Wu, Kun, Cai, Minping, Hong, Junping, Li, Lifeng, Liu, Che, Yu, Huan, Zhang, Yali, Wang, Jia, Zhang, Tianying, Ge, Shengxiang, Zhang, Jun, Yuan, Quan, Chen, Yixin, Tang, Qiyi, Chen, Honglin, Cheng, Tong, Guan, Yi, Xia, Ningshao

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Estimating the life course of influenza A(H3N2) antibody responses from cross-sectional data von Kucharski, Adam J, Lessler, Justin, Read, Jonathan M, Zhu, Huachen, Jiang, Chao Qiang, Guan, Yi, Cummings, Derek A T, Riley, Steven

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Ferrets as Models for Influenza Virus Transmission Studies and Pandemic Risk Assessments von Belser, Jessica A, Barclay, Wendy, Barr, Ian, Fouchier, Ron A M, Matsuyama, Ryota, Nishiura, Hiroshi, Peiris, Malik, Russell, Charles J, Subbarao, Kanta, Zhu, Huachen, Yen, Hui-Ling

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Amino Acid Substitutions in Polymerase Basic Protein 2 Gene Contribute to the Pathogenicity of the Novel A/H7N9 Influenza Virus in Mammalian Hosts von Mok, Chris Ka Pun, Lee, Horace Hok Yeung, Lestra, Maxime, Nicholls, John Malcolm, Chan, Michael Chi Wai, Sia, Sin Fun, Zhu, Huachen, Poon, Leo Lit Man, Guan, Yi, Peiris, Joseph Sriyal Malik

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Reconstructed influenza A/H3N2 infection histories reveal variation in incidence and antibody dynamics over the life course von Hay, James A, Zhu, Huachen, Jiang, Chao Qiang, Kwok, Kin On, Shen, Ruiyin, Kucharski, Adam, Yang, Bingyi, Read, Jonathan M, Lessler, Justin, Cummings, Derek A T, Riley, Steven

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Long term intrinsic cycling in human life course antibody responses to influenza A(H3N2): an observational and modeling study von Yang, Bingyi, García-Carreras, Bernardo, Lessler, Justin, Read, Jonathan M, Zhu, Huachen, Metcalf, C Jessica E, Hay, James A, Kwok, Kin O, Shen, Ruiyun, Jiang, Chao Q, Guan, Yi, Riley, Steven, Cummings, Derek A

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Intranasal influenza-vectored COVID-19 vaccine restrains the SARS-CoV-2 inflammatory response in hamsters von Zhang, Liang, Jiang, Yao, He, Jinhang, Chen, Junyu, Qi, Ruoyao, Yuan, Lunzhi, Shao, Tiange, Zhao, Hui, Chen, Congjie, Chen, Yaode, Wang, Xijing, Lei, Xing, Gao, Qingxiang, Zhuang, Chunlan, Zhou, Ming, Ma, Jian, Liu, Wei, Yang, Man, Fu, Rao, Wu, Yangtao, Chen, Feng, Xiong, Hualong, Nie, Meifeng, Chen, Yiyi, Wu, Kun, Fang, Mujin, Wang, Yingbin, Zheng, Zizheng, Huang, Shoujie, Ge, Shengxiang, Cheng, Shih Chin, Zhu, Huachen, Cheng, Tong, Yuan, Quan, Wu, Ting, Zhang, Jun, Chen, Yixin, Zhang, Tianying, Li, Changgui, Qi, Hai, Guan, Yi, Xia, Ningshao

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Evidence for antigenic seniority in influenza A (H3N2) antibody responses in southern China von Lessler, Justin, Riley, Steven, Read, Jonathan M, Wang, Shuying, Zhu, Huachen, Smith, Gavin J D, Guan, Yi, Jiang, Chao Qiang, Cummings, Derek A T

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Female sex hormone, progesterone, ameliorates the severity of SARS-CoV-2-caused pneumonia in the Syrian hamster model von Yuan, Lunzhi, Zhu, Huachen, Wu, Kun, Zhou, Ming, Ma, Jian, Chen, Rirong, Tang, Qiyi, Cheng, Tong, Guan, Yi, Xia, Ningshao

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Robust expansion of phylogeny for fast-growing genome sequence data von Ye, Yongtao, Shum, Marcus H, Tsui, Joseph L, Yu, Guangchuang, Smith, David K, Zhu, Huachen, Wu, Joseph T, Guan, Yi, Lam, Tommy Tsan-Yuk

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The persistence of multiple strains of avian influenza in live bird markets von Pinsent, Amy, Pepin, Kim M., Zhu, Huachen, Guan, Yi, White, Michael T., Riley, Steven

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Butyrate Protects against SARS-CoV-2-Induced Tissue Damage in Golden Hamsters von Yu, Huan, Yuan, Lunzhi, Yan, Zhigang, Zhou, Ming, Ye, Jianghui, Wu, Kun, Chen, Wenjia, Chen, Rirong, Xia, Ningshao, Guan, Yi, Zhu, Huachen

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Dual E627K and D701N mutations in the PB2 protein of A(H7N9) influenza virus increased its virulence in mammalian models von Zhu, Wenfei, Li, Long, Yan, Zhigang, Gan, Tanhuan, Li, Lifeng, Chen, Rirong, Chen, Ruidong, Zheng, Zuoyi, Hong, Wenshan, Wang, Jia, Smith, David K., Guan, Yi, Zhu, Huachen, Shu, Yuelong

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Electric Field Manipulated Multilevel Magnetic States Storage in FePt/(011) PMN-PT Heterostructure von Zhao, Xiaoyu, Wen, Jiahong, Yang, Bo, Zhu, Huachen, Cao, Qingqi, Wang, Dunhui, Qian, Zhenghong, Du, Youwei

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Surveillance of Rodent Pests for SARS-CoV-2 and Other Coronaviruses, Hong Kong von Miot, Elliott F, Worthington, Brian M, Ng, Kar Hon, de Lataillade, Lucy de Guilhem, Pierce, Mac P, Liao, Yunshi, Ko, Ronald, Shum, Marcus H, Cheung, William Y, Holmes, Edward C, Leung, Kathy S, Zhu, Huachen, Poon, Leo L, Peiris, Malik J, Guan, Yi, Leung, Gabriel M, Wu, Joseph T, Lam, Tommy T

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