DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors von McGinnis, Christopher S., Murrow, Lyndsay M., Gartner, Zev J.

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Programmed assembly of 3-dimensional microtissues with defined cellular connectivity von Gartner, Zev J, Bertozzi, Carolyn R

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Printed droplet microfluidics for on demand dispensing of picoliter droplets and cells von Cole, Russell H., Tang, Shi-Yang, Siltanen, Christian A., Shahi, Payam, Zhang, Jesse Q., Poust, Sean, Gartner, Zev J., Abate, Adam R.

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Expanding the boundaries of synthetic development von Martyn, Iain, Gartner, Zev J.

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MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices von McGinnis, Christopher S., Patterson, David M., Winkler, Juliane, Conrad, Daniel N., Hein, Marco Y., Srivastava, Vasudha, Hu, Jennifer L., Murrow, Lyndsay M., Weissman, Jonathan S., Werb, Zena, Chow, Eric D., Gartner, Zev J.

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A DNA-Based T Cell Receptor Reveals a Role for Receptor Clustering in Ligand Discrimination von Taylor, Marcus J., Husain, Kabir, Gartner, Zev J., Mayor, Satyajit, Vale, Ronald D.

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Abseq: Ultrahigh-throughput single cell protein profiling with droplet microfluidic barcoding von Shahi, Payam, Kim, Samuel C., Haliburton, John R., Gartner, Zev J., Abate, Adam R.

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deMULTIplex2: robust sample demultiplexing for scRNA-seq von Zhu, Qin, Conrad, Daniel N, Gartner, Zev J

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Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution von Yang, Dian, Jones, Matthew G., Naranjo, Santiago, Rideout, William M., Min, Kyung Hoi (Joseph), Ho, Raymond, Wu, Wei, Replogle, Joseph M., Page, Jennifer L., Quinn, Jeffrey J., Horns, Felix, Qiu, Xiaojie, Chen, Michael Z., Freed-Pastor, William A., McGinnis, Christopher S., Patterson, David M., Gartner, Zev J., Chow, Eric D., Bivona, Trever G., Chan, Michelle M., Yosef, Nir, Jacks, Tyler, Weissman, Jonathan S.

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Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids von Popova, Galina, Soliman, Sarah S., Kim, Chang N., Keefe, Matthew G., Hennick, Kelsey M., Jain, Samhita, Li, Tao, Tejera, Dario, Shin, David, Chhun, Bryant B., McGinnis, Christopher S., Speir, Matthew, Gartner, Zev J., Mehta, Shalin B., Haeussler, Maximilian, Hengen, Keith B., Ransohoff, Richard R., Piao, Xianhua, Nowakowski, Tomasz J.

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Organoid models for mammary gland dynamics and breast cancer von Srivastava, Vasudha, Huycke, Tyler R., Phong, Kiet T., Gartner, Zev J.

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T cell circuits that sense antigen density with an ultrasensitive threshold von Hernandez-Lopez, Rogelio A, Yu, Wei, Cabral, Katelyn A, Creasey, Olivia A, Lopez Pazmino, Maria Del Pilar, Tonai, Yurie, De Guzman, Arsenia, Mäkelä, Anna, Saksela, Kalle, Gartner, Zev J, Lim, Wendell A

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Directing the assembly of spatially organized multicomponent tissues from the bottom up von Liu, Jennifer S, Gartner, Zev J

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Dissecting the stem cell niche with organoid models: an engineering-based approach von Murrow, Lyndsay M, Weber, Robert J, Gartner, Zev J

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A Mechanogenetic Toolkit for Interrogating Cell Signaling in Space and Time von Seo, Daeha, Southard, Kaden M., Kim, Ji-wook, Lee, Hyun Jung, Farlow, Justin, Lee, Jung-uk, Litt, David B., Haas, Thomas, Alivisatos, A. Paul, Cheon, Jinwoo, Gartner, Zev J., Jun, Young-wook

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ZipSeq: barcoding for real-time mapping of single cell transcriptomes von Hu, Kenneth H., Eichorst, John P., McGinnis, Chris S., Patterson, David M., Chow, Eric D., Kersten, Kelly, Jameson, Stephen C., Gartner, Zev J., Rao, Arjun A., Krummel, Matthew F.

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Setting boundaries for tissue patterning von Huycke, Tyler R, Gartner, Zev J

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Commitment and oncogene-induced plasticity of human stem cell-derived pancreatic acinar and ductal organoids von Huang, Ling, Desai, Ridhdhi, Conrad, Daniel N., Leite, Nayara C., Akshinthala, Dipikaa, Lim, Christine Maria, Gonzalez, Raul, Muthuswamy, Lakshmi B., Gartner, Zev, Muthuswamy, Senthil K.

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Guiding tissue-scale self-organization von Gartner, Zev J., Hu, Jennifer L.

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Bisphenol A replacement chemicals, BPF and BPS, induce protumorigenic changes in human mammary gland organoid morphology and proteome von Winkler, Juliane, Liu, Pengyuan, Phong, Kiet, Hinrichs, Johanna H., Ataii, Nassim, Williams, Katherine, Hadler-Olsen, Elin, Samson, Susan, Gartner, Zev J., Fisher, Susan, Werb, Zena

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