Cytosolic proteins can exploit membrane localization to trigger functional assembly von Yogurtcu, Osman N, Johnson, Margaret E

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Theory of bi-molecular association dynamics in 2D for accurate model and experimental parameterization of binding rates von Yogurtcu, Osman N, Johnson, Margaret E

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Mathematical model of a personalized neoantigen cancer vaccine and the human immune system von Rodriguez Messan, Marisabel, Yogurtcu, Osman N, McGill, Joseph R, Nukala, Ujwani, Sauna, Zuben E, Yang, Hong

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A Mechanochemical Model of Actin Filaments von Yogurtcu, Osman N., Kim, Jin Seob, Sun, Sean X.

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SampPick: Selection of a Cohort of Subjects Matching a Population HLA Distribution von McGill, Joseph R, Yogurtcu, Osman N, Verthelyi, Daniela, Yang, Hong, Sauna, Zuben E

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A machine learning approach for identifying variables associated with risk of developing neutralizing antidrug antibodies to factor VIII von Rawal, Atul, Kidchob, Christopher, Ou, Jiayi, Yogurtcu, Osman N., Yang, Hong, Sauna, Zuben E.

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Benefit-risk assessment of Covid-19 vaccine, MRNA (MRNA-1273) for males age 18–64 years von Yogurtcu, Osman N., Funk, Patrick R., Forshee, Richard A., Anderson, Steven A., Marks, Peter W., Yang, Hong

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Restricted Mobility of Conserved Residues in Protein-Protein Interfaces in Molecular Simulations von Yogurtcu, Osman N., Bora Erdemli, S., Nussinov, Ruth, Turkay, Metin, Keskin, Ozlem

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A Systematic Review of the Efforts and Hindrances of Modeling and Simulation of CAR T-cell Therapy von Nukala, Ujwani, Rodriguez Messan, Marisabel, Yogurtcu, Osman N., Wang, Xiaofei, Yang, Hong

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NERDSS: A Nonequilibrium Simulator for Multibody Self-Assembly at the Cellular Scale von Varga, Matthew J., Fu, Yiben, Loggia, Spencer, Yogurtcu, Osman N., Johnson, Margaret E.

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Analysis of tumor-immune functional responses in a mathematical model of neoantigen cancer vaccines von Han, Lifeng, Rodriguez Messan, Marisabel, Yogurtcu, Osman N., Nukala, Ujwani, Yang, Hong

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Dose optimization of an adjuvanted peptide-based personalized neoantigen melanoma vaccine von Valega-Mackenzie, Wencel, Rodriguez Messan, Marisabel, Yogurtcu, Osman N, Nukala, Ujwani, Sauna, Zuben E, Yang, Hong

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Benefit-risk assessment of COVID-19 vaccine, mRNA (Comirnaty) for age 16–29 years von Funk, Patrick R., Yogurtcu, Osman N., Forshee, Richard A., Anderson, Steve A., Marks, Peter W., Yang, Hong

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Dosage optimization for reducing tumor burden using a phenotype-structured population model with a drug-resistance continuum von Han, Lifeng, Yogurtcu, Osman N, Rodriguez Messan, Marisabel, Valega-Mackenzie, Wencel, Nukala, Ujwani, Yang, Hong

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A Retrospective Review of Center for Biologics Evaluation and Research Advisory Committee Meetings in the Context of the FDA’s Benefit-Risk Framework von Mutanga, Jane Namangolwa, Nukala, Ujwani, Rodriguez Messan, Marisabel, Yogurtcu, Osman N., McCormick, Quinn, Sauna, Zuben E., Whitaker, Barbee I., Forshee, Richard A., Yang, Hong

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TCPro: an In Silico Risk Assessment Tool for Biotherapeutic Protein Immunogenicity von Yogurtcu, Osman N., Sauna, Zuben E., McGill, Joseph R., Tegenge, Million A., Yang, Hong

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An implicit lipid model for efficient reaction-diffusion simulations of protein binding to surfaces of arbitrary topology von Fu, Yiben, Yogurtcu, Osman N., Kothari, Ruchita, Thorkelsdottir, Gudrun, Sodt, Alexander J., Johnson, Margaret E.

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Summary of a Public FDA Workshop: Model Informed Drug Development Approaches for Immunogenicity Assessments von Belov, Artur A., Rodriguez Messan, Marisabel, Yogurtcu, Osman N., Schultz, Kimberly, Maxfield, Kimberly, Thompson, Laura, Revell, Sherri, Warren‐Henderson, Yolonda, Tegenge, Million A., Sauna, Zuben E., Forshee, Richard A.

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Predictive model for Zika virus RNA minipool nucleic acid testing in outbreak scenarios von Yogurtcu, Osman N., Yang, Hong, Chancey, Caren, Forshee, Richard A., Eder, Anne F.

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Collective cancer cell invasion induced by coordinated contractile stresses von Jimenez Valencia, Angela M, Wu, Pei-Hsun, Yogurtcu, Osman N, Rao, Pranay, DiGiacomo, Josh, Godet, Inês, He, Lijuan, Lee, Meng-Horng, Gilkes, Daniele, Sun, Sean X, Wirtz, Denis

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