Widespread noncoding circular RNAs in plants von Ye, Chu‐Yu, Chen, Li, Liu, Chen, Zhu, Qian‐Hao, Fan, Longjiang

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Analysis of transcriptional and epigenetic changes in hybrid vigor of allopolyploid Brassica napus uncovers key roles for small RNAs von Shen, Yifei, Sun, Shuo, Hua, Shuijin, Shen, Enhui, Ye, Chu‐Yu, Cai, Daguang, Timko, Michael P., Zhu, Qian‐Hao, Fan, Longjiang

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Genome-wide identification and functional prediction of novel and drought-responsive lincRNAs in Populus trichocarpa von Shuai, Peng, Liang, Dan, Tang, Sha, Zhang, Zhoujia, Ye, Chu-Yu, Su, Yanyan, Xia, Xinli, Yin, Weilun

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Recent origination of circular RNAs in plants von Chu, Qinjie, Ding, Yuwen, Xu, Xiaoxu, Ye, Chu‐Yu, Zhu, Qian‐Hao, Guo, Longbiao, Fan, Longjiang

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A syntelog-based pan-genome provides insights into rice domestication and de-domestication von Wu, Dongya, Xie, Lingjuan, Sun, Yanqing, Huang, Yujie, Jia, Lei, Dong, Chenfeng, Shen, Enhui, Ye, Chu-Yu, Qian, Qian, Fan, Longjiang

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Characteristics of plant circular RNAs von Chu, Qinjie, Bai, Panpan, Zhu, Xintian, Zhang, Xingchen, Mao, Lingfeng, Zhu, Qian-Hao, Fan, Longjiang, Ye, Chu-Yu

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Lateral transfers lead to the birth of momilactone biosynthetic gene clusters in grass von Wu, Dongya, Hu, Yiyu, Akashi, Shota, Nojiri, Hideaki, Guo, Longbiao, Ye, Chu‐Yu, Zhu, Qian‐Hao, Okada, Kazunori, Fan, Longjiang

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Genomic insights into the evolution of Echinochloa species as weed and orphan crop von Wu, Dongya, Shen, Enhui, Jiang, Bowen, Feng, Yu, Tang, Wei, Lao, Sangting, Jia, Lei, Lin, Han-Yang, Xie, Lingjuan, Weng, Xifang, Dong, Chenfeng, Qian, Qinghong, Lin, Feng, Xu, Haiming, Lu, Huabing, Cutti, Luan, Chen, Huajun, Deng, Shuiguang, Guo, Longbiao, Chuah, Tse-Seng, Song, Beng-Kah, Scarabel, Laura, Qiu, Jie, Zhu, Qian-Hao, Yu, Qin, Timko, Michael P., Yamaguchi, Hirofumi, Merotto, Aldo, Qiu, Yingxiong, Olsen, Kenneth M., Fan, Longjiang, Ye, Chu-Yu

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De novo sequencing and transcriptome analysis of the desert shrub, Ammopiptanthus mongolicus, during cold acclimation using Illumina/Solexa von Pang, Tao, Ye, Chu-Yu, Xia, Xinli, Yin, Weilun

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The Application of Population Genomics in Crop Research von Yang, Fan-Jing, Ma, Wei, Ye, Chu-Yu

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Echinochloa chloroplast genomes: insights into the evolution and taxonomic identification of two weedy species von Ye, Chu-Yu, Lin, Zhangxiang, Li, Gengmi, Wang, Ying-Ying, Qiu, Jie, Fu, Fei, Zhang, Haiqiang, Chen, Li, Ye, Sisi, Song, Weijie, Jin, Gulei, Zhu, Jinwen, Lu, Yongliang, Guo, Longbiao, Fan, Longjiang

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Orphan Crops and their Wild Relatives in the Genomic Era von Ye, Chu-Yu, Fan, Longjiang

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Population genomic analysis reveals domestication of cultivated rye from weedy rye von Sun, Yanqing, Shen, Enhui, Hu, Yiyu, Wu, Dongya, Feng, Yu, Lao, Sangting, Dong, Chenfeng, Du, Tianyu, Hua, Wei, Ye, Chu-Yu, Zhu, Jinhuan, Zhu, Qian-Hao, Cai, Daguang, Skuza, Lidia, Qiu, Jie, Fan, Longjiang

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GSCtool: A Novel Descriptor that Characterizes the Genome for Applying Machine Learning in Genomics von Shen, Zijie, Shen, Enhui, Zhu, Qian-Hao, Fan, Longjiang, Zou, Quan, Ye, Chu-Yu

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Horizontal transfer and evolution of the biosynthetic gene cluster for benzoxazinoids in plants von Wu, Dongya, Jiang, Bowen, Ye, Chu-Yu, Timko, Michael P., Fan, Longjiang

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A host plant genome (Zizania latifolia) after a century‐long endophyte infection von Guo, Longbiao, Qiu, Jie, Han, Zujing, Ye, Zihong, Chen, Chao, Liu, Chuanjun, Xin, Xiufang, Ye, Chu‐Yu, Wang, Ying‐Ying, Xie, Hongqing, Wang, Yu, Bao, Jiandong, Tang, She, Xu, Jie, Gui, Yijie, Fu, Fei, Wang, Weidi, Zhang, Xingchen, Zhu, Qianhua, Guang, Xuanmin, Wang, Chongzhi, Cui, Haifeng, Cai, Daguang, Ge, Song, Tuskan, Gerald A., Yang, Xiaohan, Qian, Qian, He, Sheng Yang, Wang, Jun, Zhou, Xue‐Ping, Fan, Longjiang

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The complete chloroplast genome of Echinochloa haploclada von Jiang, Bowen, Lao, Sangting, Wu, Dongya, Fan, Longjiang, Ye, Chu-Yu

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Genome re-sequencing of semi-wild soybean reveals a complex Soja population structure and deep introgression von Qiu, Jie, Wang, Yu, Wu, Sanling, Wang, Ying-Ying, Ye, Chu-Yu, Bai, Xuefei, Li, Zefeng, Yan, Chenghai, Wang, Weidi, Wang, Ziqiang, Shu, Qingyao, Xie, Jiahua, Lee, Suk-Ha, Fan, Longjiang

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Molecular characterization of putative vacuolar NHX-type Na⁺/H⁺ exchanger genes from the salt-resistant tree Populus euphratica von Ye, Chu-Yu, Zhang, He-Chen, Chen, Jin-Huan, Xia, Xin-Li, Yin, Wei-Lun

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Genomic evidence of human selection on Vavilovian mimicry von Ye, Chu-Yu, Tang, Wei, Wu, Dongya, Jia, Lei, Qiu, Jie, Chen, Meihong, Mao, Lingfeng, Lin, Feng, Xu, Haiming, Yu, Xiaoyue, Lu, Yongliang, Wang, Yonghong, Olsen, Kenneth M., Timko, Michael P., Fan, Longjiang

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