Rapid pathogen detection by metagenomic next-generation sequencing of infected body fluids von Gu, Wei, Deng, Xianding, Lee, Marco, Sucu, Yasemin D., Arevalo, Shaun, Stryke, Doug, Federman, Scot, Gopez, Allan, Reyes, Kevin, Zorn, Kelsey, Sample, Hannah, Yu, Guixia, Ishpuniani, Gurpreet, Briggs, Benjamin, Chow, Eric D., Berger, Amy, Wilson, Michael R., Wang, Candace, Hsu, Elaine, Miller, Steve, DeRisi, Joseph L., Chiu, Charles Y.

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Actionable Diagnosis of Neuroleptospirosis by Next-Generation Sequencing von Wilson, Michael R, Naccache, Samia N, Samayoa, Erik, Biagtan, Mark, Bashir, Hiba, Yu, Guixia, Salamat, Shahriar M, Somasekar, Sneha, Federman, Scot, Miller, Steve, Sokolic, Robert, Garabedian, Elizabeth, Candotti, Fabio, Buckley, Rebecca H, Reed, Kurt D, Meyer, Teresa L, Seroogy, Christine M, Galloway, Renee, Henderson, Sheryl L, Gern, James E, DeRisi, Joseph L, Chiu, Charles Y

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CRISPR–Cas12-based detection of SARS-CoV-2 von Broughton, James P., Deng, Xianding, Yu, Guixia, Fasching, Clare L., Servellita, Venice, Singh, Jasmeet, Miao, Xin, Streithorst, Jessica A., Granados, Andrea, Sotomayor-Gonzalez, Alicia, Zorn, Kelsey, Gopez, Allan, Hsu, Elaine, Gu, Wei, Miller, Steve, Pan, Chao-Yang, Guevara, Hugo, Wadford, Debra A., Chen, Janice S., Chiu, Charles Y.

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A mouse model of paralytic myelitis caused by enterovirus D68 von Hixon, Alison M, Yu, Guixia, Leser, J Smith, Yagi, Shigeo, Clarke, Penny, Chiu, Charles Y, Tyler, Kenneth L

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Nanopore DNA Sequencing and Genome Assembly on the International Space Station von Castro-Wallace, Sarah L., Chiu, Charles Y., John, Kristen K., Stahl, Sarah E., Rubins, Kathleen H., McIntyre, Alexa B. R., Dworkin, Jason P., Lupisella, Mark L., Smith, David J., Botkin, Douglas J., Stephenson, Timothy A., Juul, Sissel, Turner, Daniel J., Izquierdo, Fernando, Federman, Scot, Stryke, Doug, Somasekar, Sneha, Alexander, Noah, Yu, Guixia, Mason, Christopher E., Burton, Aaron S.

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A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012–14): a retrospective cohort study von Greninger, Alexander L, MD, Naccache, Samia N, PhD, Messacar, Kevin, MD, Clayton, Anna, BSc, Yu, Guixia, BSc, Somasekar, Sneha, BSc, Federman, Scot, BA, Stryke, Doug, BSc, Anderson, Christopher, BSc, Yagi, Shigeo, PhD, Messenger, Sharon, PhD, Wadford, Debra, PhD, Xia, Dongxiang, MD, Watt, James P, MD, Van Haren, Keith, MD, Dominguez, Samuel R, MD, Glaser, Carol, MD, Aldrovandi, Grace, Prof, Chiu, Charles Y, Dr

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Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis von Greninger, Alexander L, Naccache, Samia N, Federman, Scot, Yu, Guixia, Mbala, Placide, Bres, Vanessa, Stryke, Doug, Bouquet, Jerome, Somasekar, Sneha, Linnen, Jeffrey M, Dodd, Roger, Mulembakani, Prime, Schneider, Bradley S, Muyembe-Tamfum, Jean-Jacques, Stramer, Susan L, Chiu, Charles Y

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Idiopathic pneumonia syndrome after hematopoietic cell transplantation: evidence of occult infectious etiologies von Seo, Sachiko, Renaud, Christian, Kuypers, Jane M., Chiu, Charles Y., Huang, Meei-Li, Samayoa, Erik, Xie, Hu, Yu, Guixia, Fisher, Cynthia E., Gooley, Ted A., Miller, Steven, Hackman, Robert C., Myerson, David, Sedlak, Ruth H., Kim, Yae-Jean, Fukuda, Takahiro, Fredricks, David N., Madtes, David K., Jerome, Keith R., Boeckh, Michael

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Experimental Zika Virus Inoculation in a New World Monkey Model Reproduces Key Features of the Human Infection von Chiu, Charles Y., Sánchez-San Martín, Claudia, Bouquet, Jerome, Li, Tony, Yagi, Shigeo, Tamhankar, Manasi, Hodara, Vida L., Parodi, Laura M., Somasekar, Sneha, Yu, Guixia, Giavedoni, Luis D., Tardif, Suzette, Patterson, Jean

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Genomic Epidemiology Reconstructs the Introduction and Spread of Zika Virus in Central America and Mexico von Thézé, Julien, Li, Tony, du Plessis, Louis, Bouquet, Jerome, Kraemer, Moritz U.G., Somasekar, Sneha, Yu, Guixia, de Cesare, Mariateresa, Balmaseda, Angel, Kuan, Guillermina, Harris, Eva, Wu, Chieh-hsi, Ansari, M. Azim, Bowden, Rory, Faria, Nuno R., Yagi, Shigeo, Messenger, Sharon, Brooks, Trevor, Stone, Mars, Bloch, Evan M., Busch, Michael, Muñoz-Medina, José E., González-Bonilla, Cesar R., Wolinsky, Steven, López, Susana, Arias, Carlos F., Bonsall, David, Chiu, Charles Y., Pybus, Oliver G.

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Fatal Case of Chronic Jamestown Canyon Virus Encephalitis Diagnosed by Metagenomic Sequencing in Patient Receiving Rituximab von Solomon, Isaac H, Ganesh, Vijay S, Yu, Guixia, Deng, Xian Ding, Wilson, Michael R, Miller, Steve, Milligan, Tracey A, Mukerji, Shibani S, Mathewson, Abigail, Linxweiler, Justin, Morse, Darlene, Ritter, Jana M, Staples, J Erin, Hughes, Holly, Gould, Carolyn V, Sabeti, Pardis C, Chiu, Charles Y, Piantadosi, Anne

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Discovery of a novel polyomavirus in acute diarrheal samples from children von Yu, Guixia, Greninger, Alexander L, Isa, Pavel, Phan, Tung G, Martínez, Miguel Angel, de la Luz Sanchez, Maria, Contreras, Juan Francisco, Santos-Preciado, José Ignacio, Parsonnet, Julie, Miller, Steve, DeRisi, Joseph L, Delwart, Eric, Arias, Carlos F, Chiu, Charles Y

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A metagenomic analysis of pandemic influenza A (2009 H1N1) infection in patients from North America von Greninger, Alexander L, Chen, Eunice C, Sittler, Taylor, Scheinerman, Alex, Roubinian, Nareg, Yu, Guixia, Kim, Edward, Pillai, Dylan R, Guyard, Cyril, Mazzulli, Tony, Isa, Pavel, Arias, Carlos F, Hackett, John, Schochetman, Gerald, Miller, Steve, Tang, Patrick, Chiu, Charles Y

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Genomic Assays for Identification of Chikungunya Virus in Blood Donors, Puerto Rico, 2014 von Chiu, Charles Y, Bres, Vanessa, Yu, Guixia, Krysztof, David, Naccache, Samia N, Lee, Deanna, Pfeil, Jacob, Linnen, Jeffrey M, Stramer, Susan L

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Metagenomic Detection of Divergent Insect- and Bat-Associated Viruses in Plasma from Two African Individuals Enrolled in Blood-Borne Surveillance von Orf, Gregory S, Olivo, Ana, Harris, Barbara, Weiss, Sonja L, Achari, Asmeeta, Yu, Guixia, Federman, Scot, Mbanya, Dora, James, Linda, Mampunza, Samuel, Chiu, Charles Y, Rodgers, Mary A, Cloherty, Gavin A, Berg, Michael G

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Empirical Analysis of Transcriptional Activity in the Arabidopsis Genome von Yamada, Kayoko, Lim, Jun, Dale, Joseph M., Chen, Huaming, Shinn, Paul, Palm, Curtis J., Southwick, Audrey M., Wu, Hank C., Kim, Christopher, Nguyen, Michelle, Pham, Paul, Cheuk, Rosa, Karlin-Newmann, George, Liu, Shirley X., Lam, Bao, Sakano, Hitomi, Wu, Troy, Yu, Guixia, Miranda, Molly, Quach, Hong L., Tripp, Matthew, Chang, Charlie H., Lee, Jeong M., Toriumi, Mitsue, Marie M. H. Chan, Tang, Carolyn C., Onodera, Courtney S., Deng, Justine M., Akiyama, Kenji, Ansari, Yasser, Arakawa, Takahiro, Banh, Jenny, Banno, Fumika, Bowser, Leah, Brooks, Shelise, Carninci, Piero, Chao, Qimin, Choy, Nathan, Enju, Akiko, Goldsmith, Andrew D., Gurjal, Mani, Hansen, Nancy F., Hayashizaki, Yoshihide, Johnson-Hopson, Chanda, Hsuan, Vickie W., Iida, Kei, Karnes, Meagan, Khan, Shehnaz, Koesema, Eric, Ishida, Junko, Jiang, Paul X., Jones, Ted, Kawai, Jun, Kamiya, Asako, Meyers, Cristina, Nakajima, Maiko, Narusaka, Mari, Seki, Motoaki, Sakurai, Tetsuya, Satou, Masakazu, Tamse, Racquel, Vaysberg, Maria, Wallender, Erika K., Wong, Cecilia, Yamamura, Yuki, Yuan, Shiaulou, Shinozaki, Kazuo, Davis, Ronald W., Theologis, Athanasios, Ecker, Joseph R.

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Echinococcus multilocularis Calreticulin Interferes with C1q-Mediated Complement Activation von Xian, Siqi, Chen, Lujuan, Yan, Yan, Chen, Jianfang, Yu, Guixia, Shao, Yuxiao, Zhan, Bin, Wang, Yanhai, Zhao, Limei

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A novel adenovirus species associated with an acute respiratory outbreak in a baboon colony and evidence of coincident human infection von Chiu, Charles Y, Yagi, Shigeo, Lu, Xiaoyan, Yu, Guixia, Chen, Eunice C, Liu, Maria, Dick, Jr, Edward J, Carey, Kenneth D, Erdman, Dean D, Leland, Michelle M, Patterson, Jean L

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Experimental cross-species infection of common marmosets by titi monkey adenovirus von Yu, Guixia, Yagi, Shigeo, Carrion, Jr, Ricardo, Chen, Eunice C, Liu, Maria, Brasky, Kathleen M, Lanford, Robert E, Kelly, Kristi R, Bales, Karen L, Schnurr, David P, Canfield, Don R, Patterson, Jean L, Chiu, Charles Y

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Hydrothermal Synthesis and Photoluminescence Properties of La2−xEuxSn2O7 (x=0-2.0) Nanocrystals von Zhu, Hongliang, Yang, Deren, Zhu, Luming, Li, Dongsheng, Chen, Peihong, Yu, Guixia

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